RNA–Protein interactions for RNA: ENST00000434755.5

NOD1-206, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 2

Gene NOD1, Length 4,610 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-206ENST00000434755 KRTAP9-6A0A140TA67 174 aa3.69□□□□□ -1.82
NOD1-206ENST00000434755 KRTAP19-3Q7Z4W3 81 aa3.67□□□□□ -1.82
NOD1-206ENST00000434755 MT1EP04732 61 aa3.66□□□□□ -1.82
NOD1-206ENST00000434755 KRTAP4-7Q9BYR0 210 aa3.65□□□□□ -1.82
NOD1-206ENST00000434755 SPRR2DP22532 72 aa3.64□□□□□ -1.83
NOD1-206ENST00000434755 MT1LQ93083 61 aa3.61□□□□□ -1.83
NOD1-206ENST00000434755 DSTQ03001 7570 aaKnown RBP3.61□□□□□ -1.83
NOD1-206ENST00000434755 LCE3BQ5TA77 95 aa3.6□□□□□ -1.83
NOD1-206ENST00000434755 FCGBPQ9Y6R7 5405 aaPredicted RBP3.56□□□□□ -1.84
NOD1-206ENST00000434755 USH2AO75445 5202 aa3.54□□□□□ -1.84
NOD1-206ENST00000434755 KRTAP6-3Q3LI67 103 aa3.54□□□□□ -1.84
NOD1-206ENST00000434755 KRTAP19-7Q3SYF9 63 aa3.53□□□□□ -1.84
NOD1-206ENST00000434755 SYNE2Q8WXH0 6885 aaKnown RBP3.52□□□□□ -1.85
NOD1-206ENST00000434755 LCE1AQ5T7P2 110 aa3.51□□□□□ -1.85
NOD1-206ENST00000434755 MT1MQ8N339 61 aa3.5□□□□□ -1.85
NOD1-206ENST00000434755 KRTAP12-4P60329 112 aa3.46□□□□□ -1.86
NOD1-206ENST00000434755 KRTAP4-3Q9BYR4 195 aa3.46□□□□□ -1.86
NOD1-206ENST00000434755 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.44□□□□□ -1.86
NOD1-206ENST00000434755 KMT2DO14686 5537 aa3.43□□□□□ -1.86
NOD1-206ENST00000434755 KRTAP9-7A8MTY7 169 aa3.41□□□□□ -1.86
NOD1-206ENST00000434755 MACF1Q9UPN3 7388 aaKnown RBP3.41□□□□□ -1.86
NOD1-206ENST00000434755 LOC100996750A0A140TA64 210 aa3.4□□□□□ -1.87
NOD1-206ENST00000434755 LCE5AQ5TCM9 118 aa3.32□□□□□ -1.88
NOD1-206ENST00000434755 MT4P47944 62 aa3.31□□□□□ -1.88
NOD1-206ENST00000434755 KRTAP2-3P0C7H8 128 aa3.31□□□□□ -1.88
NOD1-206ENST00000434755 KRTAP2-4Q9BYR9 128 aa3.31□□□□□ -1.88
NOD1-206ENST00000434755 KRTAP2-1Q9BYU5 128 aa3.31□□□□□ -1.88
NOD1-206ENST00000434755 LCE3DQ9BYE3 92 aa3.3□□□□□ -1.88
NOD1-206ENST00000434755 KRTAP5-9P26371 169 aa3.29□□□□□ -1.88
NOD1-206ENST00000434755 KRTAP20-1Q3LI63 56 aa3.25□□□□□ -1.89
NOD1-206ENST00000434755 MT1AP04731 61 aa3.23□□□□□ -1.89
NOD1-206ENST00000434755 MUC12Q9UKN1 5478 aa3.22□□□□□ -1.89
NOD1-206ENST00000434755 LCE3EQ5T5B0 92 aa3.21□□□□□ -1.9
NOD1-206ENST00000434755 MT3P25713 68 aa3.19□□□□□ -1.9
NOD1-206ENST00000434755 KRTAP9-6A8MVA2 160 aa3.18□□□□□ -1.9
NOD1-206ENST00000434755 LCE4AQ5TA78 99 aa3.17□□□□□ -1.9
NOD1-206ENST00000434755 KRTAP2-2Q9BYT5 123 aa3.17□□□□□ -1.9
NOD1-206ENST00000434755 SSPOA2VEC9 5147 aa3.17□□□□□ -1.9
NOD1-206ENST00000434755 KRTAP4-9Q9BYQ8 210 aa3.13□□□□□ -1.91
NOD1-206ENST00000434755 MDN1Q9NU22 5596 aa3.08□□□□□ -1.92
NOD1-206ENST00000434755 LCE1DQ5T752 114 aa3.05□□□□□ -1.92
NOD1-206ENST00000434755 LCE1BQ5T7P3 118 aa3.05□□□□□ -1.92
NOD1-206ENST00000434755 KRTAP6-1Q3LI64 71 aa3□□□□□ -1.93
NOD1-206ENST00000434755 KRTAP9-4Q9BYQ2 154 aa2.99□□□□□ -1.93
NOD1-206ENST00000434755 KRTAP6-2Q3LI66 62 aa2.93□□□□□ -1.94
NOD1-206ENST00000434755 PRM1P04553 51 aa2.93□□□□□ -1.94
NOD1-206ENST00000434755 MUC19Q7Z5P9 8384 aa2.9□□□□□ -1.94
NOD1-206ENST00000434755 NEBP20929 6669 aa2.89□□□□□ -1.95
NOD1-206ENST00000434755 KRTAP5-5Q701N2 237 aaPredicted RBP2.72□□□□□ -1.97
NOD1-206ENST00000434755 KRTAP20-2Q3LI61 65 aa2.71□□□□□ -1.98
NOD1-206ENST00000434755 GPR98Q8WXG9 6306 aa2.71□□□□□ -1.98
NOD1-206ENST00000434755 KRTAP5-4Q6L8H1 288 aa2.69□□□□□ -1.98
NOD1-206ENST00000434755 KRTAP4-6Q9BYQ5 205 aa2.68□□□□□ -1.98
NOD1-206ENST00000434755 LCE1CQ5T751 118 aa2.49□□□□□ -2.01
NOD1-206ENST00000434755 LCE1EQ5T753 118 aa2.49□□□□□ -2.01
NOD1-206ENST00000434755 LCE1FQ5T754 118 aa2.49□□□□□ -2.01
NOD1-206ENST00000434755 KRTAP9-9Q9BYP9 154 aa2.48□□□□□ -2.01
NOD1-206ENST00000434755 MUC5ACP98088 5654 aa2.47□□□□□ -2.01
NOD1-206ENST00000434755 KRTAP4-11Q9BYQ6 195 aa2.42□□□□□ -2.02
NOD1-206ENST00000434755 HMCN1Q96RW7 5635 aa2.4□□□□□ -2.02
NOD1-206ENST00000434755 KRTAP5-2Q701N4 177 aa2.38□□□□□ -2.03
NOD1-206ENST00000434755 KRTAP5-3Q6L8H2 238 aa2.34□□□□□ -2.03
NOD1-206ENST00000434755 KRTAP4-12Q9BQ66 201 aa2.27□□□□□ -2.05
NOD1-206ENST00000434755 KRTAP4-2Q9BYR5 136 aa2.27□□□□□ -2.05
NOD1-206ENST00000434755 KRTAP4-4Q9BYR3 166 aa2.24□□□□□ -2.05
NOD1-206ENST00000434755 AHNAK2Q8IVF2 5795 aa2.22□□□□□ -2.05
NOD1-206ENST00000434755 KRTAP5-8O75690 187 aa2.12□□□□□ -2.07
NOD1-206ENST00000434755 KRTAP5-1Q6L8H4 278 aa2.01□□□□□ -2.09
NOD1-206ENST00000434755 KRTAP5-10Q6L8G5 202 aa2□□□□□ -2.09
NOD1-206ENST00000434755 KRTAP5-7Q6L8G8 165 aa1.97□□□□□ -2.09
NOD1-206ENST00000434755 KRTAP5-11Q6L8G4 156 aa1.94□□□□□ -2.1
NOD1-206ENST00000434755 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.92□□□□□ -2.1
NOD1-206ENST00000434755 AHNAKQ09666 5890 aaKnown RBP1.87□□□□□ -2.11
NOD1-206ENST00000434755 MUC5BQ9HC84 5762 aaPredicted RBP1.84□□□□□ -2.11
NOD1-206ENST00000434755 KRTAP21-2Q3LI59 83 aa1.78□□□□□ -2.12
NOD1-206ENST00000434755 PHGR1C9JFL3 82 aa1.61□□□□□ -2.15
NOD1-206ENST00000434755 KRTAP21-1Q3LI58 79 aa1.53□□□□□ -2.16
NOD1-206ENST00000434755 MUC16Q8WXI7 14507 aa1.04□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 77.2 ms