RNA–Protein interactions for RNA: ENST00000434453.1

LMBR1-209, Transcript of limb development membrane protein 1, humanhuman

TSL 5

Gene LMBR1, Length 2,229 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-209ENST00000434453 KRTAP2-3P0C7H8 128 aa8.46□□□□□ -1.06
LMBR1-209ENST00000434453 KRTAP2-4Q9BYR9 128 aa8.46□□□□□ -1.06
LMBR1-209ENST00000434453 KRTAP2-1Q9BYU5 128 aa8.46□□□□□ -1.06
LMBR1-209ENST00000434453 FCGBPQ9Y6R7 5405 aaPredicted RBP8.32□□□□□ -1.08
LMBR1-209ENST00000434453 CRCT1Q9UGL9 99 aa8.23□□□□□ -1.09
LMBR1-209ENST00000434453 KRTAP4-3Q9BYR4 195 aa8.21□□□□□ -1.09
LMBR1-209ENST00000434453 MUC12Q9UKN1 5478 aa8.19□□□□□ -1.1
LMBR1-209ENST00000434453 LOC100996750A0A140TA64 210 aa8.15□□□□□ -1.1
LMBR1-209ENST00000434453 MT1MQ8N339 61 aa8.1□□□□□ -1.11
LMBR1-209ENST00000434453 KRTAP19-3Q7Z4W3 81 aa8.1□□□□□ -1.11
LMBR1-209ENST00000434453 MT1GP13640 62 aa8.05□□□□□ -1.12
LMBR1-209ENST00000434453 MACF1Q9UPN3 7388 aaKnown RBP7.99□□□□□ -1.13
LMBR1-209ENST00000434453 KRTAP9-6A0A140TA67 174 aa7.93□□□□□ -1.14
LMBR1-209ENST00000434453 LCE5AQ5TCM9 118 aa7.87□□□□□ -1.15
LMBR1-209ENST00000434453 SPRR2FQ96RM1 72 aa7.82□□□□□ -1.16
LMBR1-209ENST00000434453 SYNE2Q8WXH0 6885 aaKnown RBP7.81□□□□□ -1.16
LMBR1-209ENST00000434453 DSTQ03001 7570 aaKnown RBP7.7□□□□□ -1.18
LMBR1-209ENST00000434453 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.64□□□□□ -1.19
LMBR1-209ENST00000434453 KRTAP5-9P26371 169 aa7.48□□□□□ -1.21
LMBR1-209ENST00000434453 MDN1Q9NU22 5596 aa7.43□□□□□ -1.22
LMBR1-209ENST00000434453 LCE3BQ5TA77 95 aa7.42□□□□□ -1.22
LMBR1-209ENST00000434453 KRTAP12-4P60329 112 aa7.41□□□□□ -1.22
LMBR1-209ENST00000434453 LCE1AQ5T7P2 110 aa7.37□□□□□ -1.23
LMBR1-209ENST00000434453 KRTAP6-1Q3LI64 71 aa7.36□□□□□ -1.23
LMBR1-209ENST00000434453 KRTAP6-3Q3LI67 103 aa7.35□□□□□ -1.23
LMBR1-209ENST00000434453 KRTAP4-9Q9BYQ8 210 aa7.29□□□□□ -1.24
LMBR1-209ENST00000434453 MT1AP04731 61 aa7.26□□□□□ -1.25
LMBR1-209ENST00000434453 KRTAP9-7A8MTY7 169 aa7.25□□□□□ -1.25
LMBR1-209ENST00000434453 SPRR2EP22531 72 aa7.23□□□□□ -1.25
LMBR1-209ENST00000434453 SPRR2BP35325 72 aa7.23□□□□□ -1.25
LMBR1-209ENST00000434453 SPRR2AP35326 72 aa7.23□□□□□ -1.25
LMBR1-209ENST00000434453 KRTAP5-5Q701N2 237 aaPredicted RBP7.21□□□□□ -1.26
LMBR1-209ENST00000434453 SYNE1Q8NF91 8797 aaKnown RBP7.1□□□□□ -1.27
LMBR1-209ENST00000434453 NEBP20929 6669 aa6.97□□□□□ -1.29
LMBR1-209ENST00000434453 LCE3DQ9BYE3 92 aa6.97□□□□□ -1.29
LMBR1-209ENST00000434453 SPRR2DP22532 72 aa6.94□□□□□ -1.3
LMBR1-209ENST00000434453 LCE3EQ5T5B0 92 aa6.86□□□□□ -1.31
LMBR1-209ENST00000434453 KRTAP9-4Q9BYQ2 154 aa6.84□□□□□ -1.32
LMBR1-209ENST00000434453 LCE4AQ5TA78 99 aa6.66□□□□□ -1.34
LMBR1-209ENST00000434453 KRTAP6-2Q3LI66 62 aa6.59□□□□□ -1.35
LMBR1-209ENST00000434453 KRTAP4-6Q9BYQ5 205 aa6.58□□□□□ -1.36
LMBR1-209ENST00000434453 PRM1P04553 51 aa6.55□□□□□ -1.36
LMBR1-209ENST00000434453 MT3P25713 68 aa6.49□□□□□ -1.37
LMBR1-209ENST00000434453 KRTAP4-12Q9BQ66 201 aa6.48□□□□□ -1.37
LMBR1-209ENST00000434453 KRTAP9-9Q9BYP9 154 aa6.42□□□□□ -1.38
LMBR1-209ENST00000434453 KRTAP20-1Q3LI63 56 aa6.38□□□□□ -1.39
LMBR1-209ENST00000434453 KRTAP5-4Q6L8H1 288 aa6.38□□□□□ -1.39
LMBR1-209ENST00000434453 OBSCNQ5VST9 7968 aa6.33□□□□□ -1.4
LMBR1-209ENST00000434453 KRTAP2-2Q9BYT5 123 aa6.3□□□□□ -1.4
LMBR1-209ENST00000434453 MT4P47944 62 aa6.07□□□□□ -1.44
LMBR1-209ENST00000434453 KRTAP20-2Q3LI61 65 aa5.96□□□□□ -1.46
LMBR1-209ENST00000434453 LCE1DQ5T752 114 aa5.95□□□□□ -1.46
LMBR1-209ENST00000434453 KRTAP5-2Q701N4 177 aa5.95□□□□□ -1.46
LMBR1-209ENST00000434453 HMCN1Q96RW7 5635 aa5.92□□□□□ -1.46
LMBR1-209ENST00000434453 KRTAP5-3Q6L8H2 238 aa5.74□□□□□ -1.49
LMBR1-209ENST00000434453 MUC5ACP98088 5654 aa5.53□□□□□ -1.52
LMBR1-209ENST00000434453 KRTAP4-11Q9BYQ6 195 aa5.43□□□□□ -1.54
LMBR1-209ENST00000434453 LCE1EQ5T753 118 aa5.35□□□□□ -1.55
LMBR1-209ENST00000434453 AHNAK2Q8IVF2 5795 aa5.26□□□□□ -1.57
LMBR1-209ENST00000434453 LCE1BQ5T7P3 118 aa5.23□□□□□ -1.57
LMBR1-209ENST00000434453 KRTAP4-2Q9BYR5 136 aa5.21□□□□□ -1.58
LMBR1-209ENST00000434453 KRTAP5-10Q6L8G5 202 aa5.15□□□□□ -1.59
LMBR1-209ENST00000434453 KRTAP5-1Q6L8H4 278 aa5.13□□□□□ -1.59
LMBR1-209ENST00000434453 LCE1CQ5T751 118 aa5.05□□□□□ -1.6
LMBR1-209ENST00000434453 LCE1FQ5T754 118 aa5□□□□□ -1.61
LMBR1-209ENST00000434453 KRTAP5-8O75690 187 aa4.91□□□□□ -1.62
LMBR1-209ENST00000434453 GPR98Q8WXG9 6306 aa4.83□□□□□ -1.64
LMBR1-209ENST00000434453 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.8□□□□□ -1.64
LMBR1-209ENST00000434453 KRTAP21-2Q3LI59 83 aa4.77□□□□□ -1.65
LMBR1-209ENST00000434453 KRTAP5-7Q6L8G8 165 aa4.75□□□□□ -1.65
LMBR1-209ENST00000434453 KRTAP5-11Q6L8G4 156 aa4.36□□□□□ -1.71
LMBR1-209ENST00000434453 KRTAP4-4Q9BYR3 166 aa4.33□□□□□ -1.72
LMBR1-209ENST00000434453 MUC5BQ9HC84 5762 aaPredicted RBP4.32□□□□□ -1.72
LMBR1-209ENST00000434453 KRTAP21-1Q3LI58 79 aa4.13□□□□□ -1.75
LMBR1-209ENST00000434453 MUC19Q7Z5P9 8384 aa3.98□□□□□ -1.77
LMBR1-209ENST00000434453 AHNAKQ09666 5890 aaKnown RBP3.95□□□□□ -1.78
LMBR1-209ENST00000434453 PHGR1C9JFL3 82 aa3.78□□□□□ -1.8
LMBR1-209ENST00000434453 MUC16Q8WXI7 14507 aa2.53□□□□□ -2
Retrieved 78 of 20,778 RNA–protein pairs in 6.6 ms