RNA–Protein interactions for RNA: ENST00000434411.5

SNHG20-202, Transcript of small nucleolar RNA host gene 20, humanhuman

TSL 1 (best) BASIC

Gene SNHG20, Length 2,143 nt, Biotype sense overlapping, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG20-202ENST00000434411 NEBP20929 6669 aa4.61□□□□□ -1.67
SNHG20-202ENST00000434411 KRTAP10-7P60409 375 aaPredicted RBP4.6□□□□□ -1.67
SNHG20-202ENST00000434411 MUC12Q9UKN1 5478 aa4.58□□□□□ -1.68
SNHG20-202ENST00000434411 KRTAP12-3P60328 96 aa4.57□□□□□ -1.68
SNHG20-202ENST00000434411 LCE4AQ5TA78 99 aa4.57□□□□□ -1.68
SNHG20-202ENST00000434411 SPRR2FQ96RM1 72 aa4.54□□□□□ -1.68
SNHG20-202ENST00000434411 KRTAP20-1Q3LI63 56 aa4.52□□□□□ -1.69
SNHG20-202ENST00000434411 KMT2DO14686 5537 aa4.51□□□□□ -1.69
SNHG20-202ENST00000434411 SPRR2EP22531 72 aa4.48□□□□□ -1.69
SNHG20-202ENST00000434411 SPRR2BP35325 72 aa4.48□□□□□ -1.69
SNHG20-202ENST00000434411 SPRR2AP35326 72 aa4.48□□□□□ -1.69
SNHG20-202ENST00000434411 KRTAP4-8A0A0G2JLE6 195 aa4.45□□□□□ -1.7
SNHG20-202ENST00000434411 KRTAP4-8Q9BYQ9 185 aa4.45□□□□□ -1.7
SNHG20-202ENST00000434411 MDN1Q9NU22 5596 aa4.44□□□□□ -1.7
SNHG20-202ENST00000434411 KRTAP2-3P0C7H8 128 aa4.42□□□□□ -1.7
SNHG20-202ENST00000434411 KRTAP2-4Q9BYR9 128 aa4.42□□□□□ -1.7
SNHG20-202ENST00000434411 KRTAP19-5Q3LI72 72 aa4.4□□□□□ -1.71
SNHG20-202ENST00000434411 LCE1AQ5T7P2 110 aa4.39□□□□□ -1.71
SNHG20-202ENST00000434411 SPRR2DP22532 72 aa4.33□□□□□ -1.72
SNHG20-202ENST00000434411 LCE1FQ5T754 118 aa4.3□□□□□ -1.72
SNHG20-202ENST00000434411 LCE3CQ5T5A8 94 aa4.29□□□□□ -1.72
SNHG20-202ENST00000434411 KRTAP2-1Q9BYU5 128 aa4.28□□□□□ -1.72
SNHG20-202ENST00000434411 KRTAP19-7Q3SYF9 63 aa4.25□□□□□ -1.73
SNHG20-202ENST00000434411 LCE3BQ5TA77 95 aa4.21□□□□□ -1.74
SNHG20-202ENST00000434411 LCE1EQ5T753 118 aa4.19□□□□□ -1.74
SNHG20-202ENST00000434411 MT1EP04732 61 aa4.18□□□□□ -1.74
SNHG20-202ENST00000434411 MT1LQ93083 61 aa4.15□□□□□ -1.75
SNHG20-202ENST00000434411 KRTAP9-6A8MVA2 160 aa4.12□□□□□ -1.75
SNHG20-202ENST00000434411 KRTAP19-3Q7Z4W3 81 aa4.12□□□□□ -1.75
SNHG20-202ENST00000434411 KRTAP4-7Q9BYR0 210 aa4.09□□□□□ -1.76
SNHG20-202ENST00000434411 KRTAP12-4P60329 112 aa4.05□□□□□ -1.76
SNHG20-202ENST00000434411 MT1GP13640 62 aa4.04□□□□□ -1.76
SNHG20-202ENST00000434411 DSTQ03001 7570 aaKnown RBP4.03□□□□□ -1.76
SNHG20-202ENST00000434411 LCE1DQ5T752 114 aa4.03□□□□□ -1.76
SNHG20-202ENST00000434411 MT3P25713 68 aa4.01□□□□□ -1.77
SNHG20-202ENST00000434411 MT1MQ8N339 61 aa3.94□□□□□ -1.78
SNHG20-202ENST00000434411 KRTAP4-12Q9BQ66 201 aa3.88□□□□□ -1.79
SNHG20-202ENST00000434411 KRTAP4-9Q9BYQ8 210 aa3.88□□□□□ -1.79
SNHG20-202ENST00000434411 KRTAP4-3Q9BYR4 195 aa3.83□□□□□ -1.8
SNHG20-202ENST00000434411 LOC100996750A0A140TA64 210 aa3.81□□□□□ -1.8
SNHG20-202ENST00000434411 MT4P47944 62 aa3.77□□□□□ -1.81
SNHG20-202ENST00000434411 KRTAP5-4Q6L8H1 288 aa3.74□□□□□ -1.81
SNHG20-202ENST00000434411 LCE3EQ5T5B0 92 aa3.68□□□□□ -1.82
SNHG20-202ENST00000434411 KRTAP4-6Q9BYQ5 205 aa3.65□□□□□ -1.83
SNHG20-202ENST00000434411 GPR98Q8WXG9 6306 aa3.64□□□□□ -1.83
SNHG20-202ENST00000434411 HMCN1Q96RW7 5635 aa3.64□□□□□ -1.83
SNHG20-202ENST00000434411 PRM1P04553 51 aa3.59□□□□□ -1.83
SNHG20-202ENST00000434411 KRTAP5-5Q701N2 237 aaPredicted RBP3.59□□□□□ -1.83
SNHG20-202ENST00000434411 MT1AP04731 61 aa3.53□□□□□ -1.84
SNHG20-202ENST00000434411 KRTAP20-2Q3LI61 65 aa3.53□□□□□ -1.84
SNHG20-202ENST00000434411 KRTAP5-10Q6L8G5 202 aa3.5□□□□□ -1.85
SNHG20-202ENST00000434411 AHNAK2Q8IVF2 5795 aa3.49□□□□□ -1.85
SNHG20-202ENST00000434411 KRTAP6-1Q3LI64 71 aa3.47□□□□□ -1.85
SNHG20-202ENST00000434411 KRTAP5-3Q6L8H2 238 aa3.45□□□□□ -1.86
SNHG20-202ENST00000434411 SYNE1Q8NF91 8797 aaKnown RBP3.43□□□□□ -1.86
SNHG20-202ENST00000434411 LCE3DQ9BYE3 92 aa3.38□□□□□ -1.87
SNHG20-202ENST00000434411 KRTAP5-7Q6L8G8 165 aa3.38□□□□□ -1.87
SNHG20-202ENST00000434411 KRTAP5-2Q701N4 177 aa3.27□□□□□ -1.89
SNHG20-202ENST00000434411 KRTAP4-11Q9BYQ6 195 aa3.22□□□□□ -1.89
SNHG20-202ENST00000434411 KRTAP6-2Q3LI66 62 aa3.2□□□□□ -1.9
SNHG20-202ENST00000434411 KRTAP5-8O75690 187 aa3.1□□□□□ -1.91
SNHG20-202ENST00000434411 OBSCNQ5VST9 7968 aa3.08□□□□□ -1.92
SNHG20-202ENST00000434411 KRTAP5-1Q6L8H4 278 aa2.93□□□□□ -1.94
SNHG20-202ENST00000434411 MUC5ACP98088 5654 aa2.87□□□□□ -1.95
SNHG20-202ENST00000434411 MUC5BQ9HC84 5762 aaPredicted RBP2.84□□□□□ -1.95
SNHG20-202ENST00000434411 AHNAKQ09666 5890 aaKnown RBP2.82□□□□□ -1.96
SNHG20-202ENST00000434411 KRTAP4-2Q9BYR5 136 aa2.78□□□□□ -1.96
SNHG20-202ENST00000434411 LCE1CQ5T751 118 aa2.76□□□□□ -1.97
SNHG20-202ENST00000434411 LCE1BQ5T7P3 118 aa2.76□□□□□ -1.97
SNHG20-202ENST00000434411 MUC19Q7Z5P9 8384 aa2.68□□□□□ -1.98
SNHG20-202ENST00000434411 KRTAP21-1Q3LI58 79 aa2.45□□□□□ -2.02
SNHG20-202ENST00000434411 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.39□□□□□ -2.03
SNHG20-202ENST00000434411 KRTAP5-11Q6L8G4 156 aa2.38□□□□□ -2.03
SNHG20-202ENST00000434411 KRTAP21-2Q3LI59 83 aa2.25□□□□□ -2.05
SNHG20-202ENST00000434411 PHGR1C9JFL3 82 aa2.06□□□□□ -2.08
SNHG20-202ENST00000434411 KRTAP4-4Q9BYR3 166 aa2.03□□□□□ -2.08
SNHG20-202ENST00000434411 MUC16Q8WXI7 14507 aa1.37□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 12.4 ms