RNA–Protein interactions for RNA: ENST00000433627.9

LSM14A-201, Transcript of LSM14A, mRNA processing body assembly factor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LSM14A, Length 3,424 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM14A-201ENST00000433627 SPRR2FQ96RM1 72 aa4.62□□□□□ -1.67
LSM14A-201ENST00000433627 KRTAP9-6A0A140TA67 174 aa4.59□□□□□ -1.67
LSM14A-201ENST00000433627 CRCT1Q9UGL9 99 aa4.58□□□□□ -1.68
LSM14A-201ENST00000433627 KRTAP19-4Q3LI73 84 aa4.58□□□□□ -1.68
LSM14A-201ENST00000433627 KRTAP19-3Q7Z4W3 81 aa4.57□□□□□ -1.68
LSM14A-201ENST00000433627 DSTQ03001 7570 aaKnown RBP4.57□□□□□ -1.68
LSM14A-201ENST00000433627 LOC100996750A0A140TA64 210 aa4.57□□□□□ -1.68
LSM14A-201ENST00000433627 SYNE2Q8WXH0 6885 aaKnown RBP4.56□□□□□ -1.68
LSM14A-201ENST00000433627 MT1GP13640 62 aa4.55□□□□□ -1.68
LSM14A-201ENST00000433627 KRTAP9-2Q9BYQ4 174 aa4.55□□□□□ -1.68
LSM14A-201ENST00000433627 MT1MQ8N339 61 aa4.55□□□□□ -1.68
LSM14A-201ENST00000433627 INE1O15225 51 aa4.45□□□□□ -1.7
LSM14A-201ENST00000433627 KRTAP2-3P0C7H8 128 aa4.43□□□□□ -1.7
LSM14A-201ENST00000433627 KRTAP2-4Q9BYR9 128 aa4.43□□□□□ -1.7
LSM14A-201ENST00000433627 KRTAP2-1Q9BYU5 128 aa4.43□□□□□ -1.7
LSM14A-201ENST00000433627 MDN1Q9NU22 5596 aa4.41□□□□□ -1.7
LSM14A-201ENST00000433627 LCE5AQ5TCM9 118 aa4.4□□□□□ -1.7
LSM14A-201ENST00000433627 OBSCNQ5VST9 7968 aa4.27□□□□□ -1.73
LSM14A-201ENST00000433627 SPRR2EP22531 72 aa4.25□□□□□ -1.73
LSM14A-201ENST00000433627 SPRR2BP35325 72 aa4.25□□□□□ -1.73
LSM14A-201ENST00000433627 SPRR2AP35326 72 aa4.25□□□□□ -1.73
LSM14A-201ENST00000433627 LCE1AQ5T7P2 110 aa4.25□□□□□ -1.73
LSM14A-201ENST00000433627 SYNE1Q8NF91 8797 aaKnown RBP4.21□□□□□ -1.74
LSM14A-201ENST00000433627 KRTAP5-9P26371 169 aa4.2□□□□□ -1.74
LSM14A-201ENST00000433627 LCE3BQ5TA77 95 aa4.18□□□□□ -1.74
LSM14A-201ENST00000433627 KRTAP9-4Q9BYQ2 154 aa4.17□□□□□ -1.74
LSM14A-201ENST00000433627 KRTAP6-1Q3LI64 71 aa4.1□□□□□ -1.75
LSM14A-201ENST00000433627 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.07□□□□□ -1.76
LSM14A-201ENST00000433627 KRTAP9-9Q9BYP9 154 aa4.07□□□□□ -1.76
LSM14A-201ENST00000433627 SPRR2DP22532 72 aa4.07□□□□□ -1.76
LSM14A-201ENST00000433627 KRTAP4-9Q9BYQ8 210 aa4.05□□□□□ -1.76
LSM14A-201ENST00000433627 MT1AP04731 61 aa4.02□□□□□ -1.77
LSM14A-201ENST00000433627 KRTAP9-7A8MTY7 169 aa4.02□□□□□ -1.77
LSM14A-201ENST00000433627 LCE4AQ5TA78 99 aa4.01□□□□□ -1.77
LSM14A-201ENST00000433627 KRTAP6-3Q3LI67 103 aa3.99□□□□□ -1.77
LSM14A-201ENST00000433627 KRTAP12-4P60329 112 aa3.99□□□□□ -1.77
LSM14A-201ENST00000433627 KRTAP5-5Q701N2 237 aaPredicted RBP3.95□□□□□ -1.78
LSM14A-201ENST00000433627 LCE1FQ5T754 118 aa3.9□□□□□ -1.79
LSM14A-201ENST00000433627 LCE3DQ9BYE3 92 aa3.82□□□□□ -1.8
LSM14A-201ENST00000433627 KRTAP2-2Q9BYT5 123 aa3.81□□□□□ -1.8
LSM14A-201ENST00000433627 NEBP20929 6669 aa3.81□□□□□ -1.8
LSM14A-201ENST00000433627 KRTAP6-2Q3LI66 62 aa3.73□□□□□ -1.81
LSM14A-201ENST00000433627 LCE3EQ5T5B0 92 aa3.73□□□□□ -1.81
LSM14A-201ENST00000433627 MT3P25713 68 aa3.66□□□□□ -1.82
LSM14A-201ENST00000433627 MT4P47944 62 aa3.64□□□□□ -1.83
LSM14A-201ENST00000433627 KRTAP4-6Q9BYQ5 205 aa3.58□□□□□ -1.84
LSM14A-201ENST00000433627 KRTAP5-4Q6L8H1 288 aa3.57□□□□□ -1.84
LSM14A-201ENST00000433627 KRTAP20-1Q3LI63 56 aa3.51□□□□□ -1.85
LSM14A-201ENST00000433627 PRM1P04553 51 aa3.51□□□□□ -1.85
LSM14A-201ENST00000433627 LCE1EQ5T753 118 aa3.5□□□□□ -1.85
LSM14A-201ENST00000433627 HMCN1Q96RW7 5635 aa3.44□□□□□ -1.86
LSM14A-201ENST00000433627 KRTAP20-2Q3LI61 65 aa3.44□□□□□ -1.86
LSM14A-201ENST00000433627 LCE1DQ5T752 114 aa3.4□□□□□ -1.87
LSM14A-201ENST00000433627 KRTAP5-2Q701N4 177 aa3.29□□□□□ -1.88
LSM14A-201ENST00000433627 KRTAP5-3Q6L8H2 238 aa3.23□□□□□ -1.89
LSM14A-201ENST00000433627 GPR98Q8WXG9 6306 aa3.16□□□□□ -1.9
LSM14A-201ENST00000433627 KRTAP4-12Q9BQ66 201 aa3.16□□□□□ -1.9
LSM14A-201ENST00000433627 LCE1BQ5T7P3 118 aa3.1□□□□□ -1.91
LSM14A-201ENST00000433627 MUC5ACP98088 5654 aa3.09□□□□□ -1.91
LSM14A-201ENST00000433627 KRTAP5-7Q6L8G8 165 aa2.91□□□□□ -1.94
LSM14A-201ENST00000433627 KRTAP4-11Q9BYQ6 195 aa2.9□□□□□ -1.94
LSM14A-201ENST00000433627 KRTAP5-1Q6L8H4 278 aa2.86□□□□□ -1.95
LSM14A-201ENST00000433627 KRTAP4-2Q9BYR5 136 aa2.85□□□□□ -1.95
LSM14A-201ENST00000433627 KRTAP5-10Q6L8G5 202 aa2.85□□□□□ -1.95
LSM14A-201ENST00000433627 MUC19Q7Z5P9 8384 aa2.84□□□□□ -1.96
LSM14A-201ENST00000433627 AHNAK2Q8IVF2 5795 aa2.83□□□□□ -1.96
LSM14A-201ENST00000433627 LCE1CQ5T751 118 aa2.8□□□□□ -1.96
LSM14A-201ENST00000433627 KRTAP5-8O75690 187 aa2.75□□□□□ -1.97
LSM14A-201ENST00000433627 MUC5BQ9HC84 5762 aaPredicted RBP2.7□□□□□ -1.98
LSM14A-201ENST00000433627 AHNAKQ09666 5890 aaKnown RBP2.68□□□□□ -1.98
LSM14A-201ENST00000433627 KRTAP21-2Q3LI59 83 aa2.6□□□□□ -1.99
LSM14A-201ENST00000433627 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.58□□□□□ -2
LSM14A-201ENST00000433627 KRTAP4-4Q9BYR3 166 aa2.53□□□□□ -2
LSM14A-201ENST00000433627 KRTAP5-11Q6L8G4 156 aa2.42□□□□□ -2.02
LSM14A-201ENST00000433627 PHGR1C9JFL3 82 aa2.11□□□□□ -2.07
LSM14A-201ENST00000433627 KRTAP21-1Q3LI58 79 aa2.07□□□□□ -2.08
LSM14A-201ENST00000433627 MUC16Q8WXI7 14507 aa1.34□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 12.7 ms