RNA–Protein interactions for RNA: ENST00000433118.5

SMPD4-206, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 3,335 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-206ENST00000433118 KRTAP9-2Q9BYQ4 174 aa3.64□□□□□ -1.83
SMPD4-206ENST00000433118 DSTQ03001 7570 aaKnown RBP3.64□□□□□ -1.83
SMPD4-206ENST00000433118 MT1EP04732 61 aa3.64□□□□□ -1.83
SMPD4-206ENST00000433118 MT1LQ93083 61 aa3.61□□□□□ -1.83
SMPD4-206ENST00000433118 KRTAP2-3P0C7H8 128 aa3.59□□□□□ -1.83
SMPD4-206ENST00000433118 KRTAP2-4Q9BYR9 128 aa3.59□□□□□ -1.83
SMPD4-206ENST00000433118 KRTAP2-1Q9BYU5 128 aa3.59□□□□□ -1.83
SMPD4-206ENST00000433118 KRTAP19-4Q3LI73 84 aa3.58□□□□□ -1.84
SMPD4-206ENST00000433118 SPRR2FQ96RM1 72 aa3.55□□□□□ -1.84
SMPD4-206ENST00000433118 KRTAP4-3Q9BYR4 195 aa3.54□□□□□ -1.84
SMPD4-206ENST00000433118 MDN1Q9NU22 5596 aa3.53□□□□□ -1.84
SMPD4-206ENST00000433118 CRCT1Q9UGL9 99 aa3.52□□□□□ -1.85
SMPD4-206ENST00000433118 KRTAP9-6A0A140TA67 174 aa3.52□□□□□ -1.85
SMPD4-206ENST00000433118 LOC100996750A0A140TA64 210 aa3.46□□□□□ -1.86
SMPD4-206ENST00000433118 KRTAP19-3Q7Z4W3 81 aa3.45□□□□□ -1.86
SMPD4-206ENST00000433118 MT1GP13640 62 aa3.42□□□□□ -1.86
SMPD4-206ENST00000433118 MT1MQ8N339 61 aa3.42□□□□□ -1.86
SMPD4-206ENST00000433118 LCE5AQ5TCM9 118 aa3.36□□□□□ -1.87
SMPD4-206ENST00000433118 OBSCNQ5VST9 7968 aa3.34□□□□□ -1.87
SMPD4-206ENST00000433118 SYNE1Q8NF91 8797 aaKnown RBP3.32□□□□□ -1.88
SMPD4-206ENST00000433118 LCE1AQ5T7P2 110 aa3.28□□□□□ -1.88
SMPD4-206ENST00000433118 SPRR2EP22531 72 aa3.28□□□□□ -1.88
SMPD4-206ENST00000433118 SPRR2BP35325 72 aa3.28□□□□□ -1.88
SMPD4-206ENST00000433118 SPRR2AP35326 72 aa3.28□□□□□ -1.88
SMPD4-206ENST00000433118 KRTAP5-9P26371 169 aa3.26□□□□□ -1.89
SMPD4-206ENST00000433118 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.24□□□□□ -1.89
SMPD4-206ENST00000433118 KRTAP12-4P60329 112 aa3.24□□□□□ -1.89
SMPD4-206ENST00000433118 LCE3BQ5TA77 95 aa3.18□□□□□ -1.9
SMPD4-206ENST00000433118 KRTAP9-7A8MTY7 169 aa3.14□□□□□ -1.91
SMPD4-206ENST00000433118 SPRR2DP22532 72 aa3.14□□□□□ -1.91
SMPD4-206ENST00000433118 KRTAP6-3Q3LI67 103 aa3.13□□□□□ -1.91
SMPD4-206ENST00000433118 KRTAP4-9Q9BYQ8 210 aa3.12□□□□□ -1.91
SMPD4-206ENST00000433118 KRTAP6-1Q3LI64 71 aa3.09□□□□□ -1.92
SMPD4-206ENST00000433118 MT1AP04731 61 aa3.04□□□□□ -1.92
SMPD4-206ENST00000433118 NEBP20929 6669 aa3.03□□□□□ -1.92
SMPD4-206ENST00000433118 LCE3DQ9BYE3 92 aa3□□□□□ -1.93
SMPD4-206ENST00000433118 KRTAP5-5Q701N2 237 aaPredicted RBP2.99□□□□□ -1.93
SMPD4-206ENST00000433118 LCE3EQ5T5B0 92 aa2.96□□□□□ -1.93
SMPD4-206ENST00000433118 PRM1P04553 51 aa2.88□□□□□ -1.95
SMPD4-206ENST00000433118 KRTAP9-4Q9BYQ2 154 aa2.85□□□□□ -1.95
SMPD4-206ENST00000433118 MT4P47944 62 aa2.83□□□□□ -1.96
SMPD4-206ENST00000433118 KRTAP6-2Q3LI66 62 aa2.83□□□□□ -1.96
SMPD4-206ENST00000433118 KRTAP4-6Q9BYQ5 205 aa2.8□□□□□ -1.96
SMPD4-206ENST00000433118 KRTAP20-1Q3LI63 56 aa2.77□□□□□ -1.97
SMPD4-206ENST00000433118 LCE1EQ5T753 118 aa2.75□□□□□ -1.97
SMPD4-206ENST00000433118 KRTAP5-4Q6L8H1 288 aa2.74□□□□□ -1.97
SMPD4-206ENST00000433118 HMCN1Q96RW7 5635 aa2.73□□□□□ -1.97
SMPD4-206ENST00000433118 MT3P25713 68 aa2.73□□□□□ -1.97
SMPD4-206ENST00000433118 KRTAP2-2Q9BYT5 123 aa2.72□□□□□ -1.97
SMPD4-206ENST00000433118 LCE1DQ5T752 114 aa2.66□□□□□ -1.98
SMPD4-206ENST00000433118 KRTAP20-2Q3LI61 65 aa2.64□□□□□ -1.99
SMPD4-206ENST00000433118 LCE4AQ5TA78 99 aa2.64□□□□□ -1.99
SMPD4-206ENST00000433118 LCE1FQ5T754 118 aa2.59□□□□□ -2
SMPD4-206ENST00000433118 MUC19Q7Z5P9 8384 aa2.58□□□□□ -2
SMPD4-206ENST00000433118 KRTAP9-9Q9BYP9 154 aa2.57□□□□□ -2
SMPD4-206ENST00000433118 KRTAP5-2Q701N4 177 aa2.51□□□□□ -2.01
SMPD4-206ENST00000433118 KRTAP5-3Q6L8H2 238 aa2.49□□□□□ -2.01
SMPD4-206ENST00000433118 GPR98Q8WXG9 6306 aa2.41□□□□□ -2.02
SMPD4-206ENST00000433118 LCE1BQ5T7P3 118 aa2.35□□□□□ -2.03
SMPD4-206ENST00000433118 MUC5ACP98088 5654 aa2.35□□□□□ -2.03
SMPD4-206ENST00000433118 AHNAK2Q8IVF2 5795 aa2.26□□□□□ -2.05
SMPD4-206ENST00000433118 KRTAP4-11Q9BYQ6 195 aa2.26□□□□□ -2.05
SMPD4-206ENST00000433118 KRTAP5-1Q6L8H4 278 aa2.21□□□□□ -2.06
SMPD4-206ENST00000433118 KRTAP4-2Q9BYR5 136 aa2.17□□□□□ -2.06
SMPD4-206ENST00000433118 KRTAP5-10Q6L8G5 202 aa2.17□□□□□ -2.06
SMPD4-206ENST00000433118 KRTAP5-8O75690 187 aa2.15□□□□□ -2.07
SMPD4-206ENST00000433118 LCE1CQ5T751 118 aa2.11□□□□□ -2.07
SMPD4-206ENST00000433118 MUC5BQ9HC84 5762 aaPredicted RBP2.1□□□□□ -2.07
SMPD4-206ENST00000433118 KRTAP5-7Q6L8G8 165 aa2.09□□□□□ -2.07
SMPD4-206ENST00000433118 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.01□□□□□ -2.09
SMPD4-206ENST00000433118 KRTAP4-12Q9BQ66 201 aa1.97□□□□□ -2.09
SMPD4-206ENST00000433118 KRTAP21-2Q3LI59 83 aa1.97□□□□□ -2.09
SMPD4-206ENST00000433118 KRTAP4-4Q9BYR3 166 aa1.93□□□□□ -2.1
SMPD4-206ENST00000433118 AHNAKQ09666 5890 aaKnown RBP1.85□□□□□ -2.11
SMPD4-206ENST00000433118 KRTAP5-11Q6L8G4 156 aa1.83□□□□□ -2.12
SMPD4-206ENST00000433118 KRTAP21-1Q3LI58 79 aa1.78□□□□□ -2.13
SMPD4-206ENST00000433118 PHGR1C9JFL3 82 aa1.6□□□□□ -2.15
SMPD4-206ENST00000433118 MUC16Q8WXI7 14507 aa1.06□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 9.9 ms