RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 SMIM11BQ8TCY0 68 aa0.59□□□□□ -2.31
HMGB1P27-201ENST00000431429 MRPL34Q9BQ48 92 aaKnown RBP0.58□□□□□ -2.32
HMGB1P27-201ENST00000431429 SYNE1Q8NF91 8797 aaKnown RBP0.58□□□□□ -2.32
HMGB1P27-201ENST00000431429 HCG22E2RYF7 251 aa0.57□□□□□ -2.32
HMGB1P27-201ENST00000431429 LEPROTL1O95214 131 aa0.57□□□□□ -2.32
HMGB1P27-201ENST00000431429 MT1EP04732 61 aa0.57□□□□□ -2.32
HMGB1P27-201ENST00000431429 CCKP06307 115 aa0.57□□□□□ -2.32
HMGB1P27-201ENST00000431429 PMCHL1Q16048 86 aa0.57□□□□□ -2.32
HMGB1P27-201ENST00000431429 LINC01545Q5VT33 79 aa0.57□□□□□ -2.32
HMGB1P27-201ENST00000431429 KRTAP19-7Q3SYF9 63 aa0.56□□□□□ -2.32
HMGB1P27-201ENST00000431429 C18orf32Q8TCD1 76 aa0.56□□□□□ -2.32
HMGB1P27-201ENST00000431429 LOC101927531A0A1B0GV80 90 aa0.55□□□□□ -2.32
HMGB1P27-201ENST00000431429 M0QZ58 72 aa0.55□□□□□ -2.32
HMGB1P27-201ENST00000431429 MT-ATP8P03928 68 aa0.55□□□□□ -2.32
HMGB1P27-201ENST00000431429 MT1MQ8N339 61 aa0.55□□□□□ -2.32
HMGB1P27-201ENST00000431429 A0A087WVE0 104 aa0.54□□□□□ -2.32
HMGB1P27-201ENST00000431429 A0A0D9SG42 100 aa0.54□□□□□ -2.32
HMGB1P27-201ENST00000431429 ACYP1P07311 99 aa0.54□□□□□ -2.32
HMGB1P27-201ENST00000431429 SMIM6P0DI80 62 aa0.54□□□□□ -2.32
HMGB1P27-201ENST00000431429 NREPQ16612 68 aa0.54□□□□□ -2.32
HMGB1P27-201ENST00000431429 C10orf95Q9H7T3 257 aa0.54□□□□□ -2.32
HMGB1P27-201ENST00000431429 LINC00208Q96KT6 92 aa0.53□□□□□ -2.32
HMGB1P27-201ENST00000431429 PMCHL2Q9BQD1 86 aa0.53□□□□□ -2.32
HMGB1P27-201ENST00000431429 TP53AIP1Q9HCN2 124 aa0.53□□□□□ -2.32
HMGB1P27-201ENST00000431429 COX6CP09669 75 aa0.52□□□□□ -2.33
HMGB1P27-201ENST00000431429 KRTAP19-5Q3LI72 72 aa0.52□□□□□ -2.33
HMGB1P27-201ENST00000431429 MT1LQ93083 61 aa0.52□□□□□ -2.33
HMGB1P27-201ENST00000431429 MMP24-AS1A0A0U1RRL7 71 aa0.51□□□□□ -2.33
HMGB1P27-201ENST00000431429 SYS1-DBNDD2H3BUS1 97 aa0.51□□□□□ -2.33
HMGB1P27-201ENST00000431429 KRTDAPP60985 99 aa0.51□□□□□ -2.33
HMGB1P27-201ENST00000431429 SPTSSBQ8NFR3 76 aa0.51□□□□□ -2.33
HMGB1P27-201ENST00000431429 PRR15LQ9BU68 103 aa0.51□□□□□ -2.33
HMGB1P27-201ENST00000431429 TRAV22A0A0B4J277 110 aa0.5□□□□□ -2.33
HMGB1P27-201ENST00000431429 TMEM218A2RU14 115 aa0.5□□□□□ -2.33
HMGB1P27-201ENST00000431429 HIGD1BQ9P298 99 aa0.5□□□□□ -2.33
HMGB1P27-201ENST00000431429 SERP1Q9Y6X1 66 aa0.5□□□□□ -2.33
HMGB1P27-201ENST00000431429 ACYP2P14621 99 aa0.49□□□□□ -2.33
HMGB1P27-201ENST00000431429 CYP4F30PQ9H0H9 118 aa0.49□□□□□ -2.33
HMGB1P27-201ENST00000431429 PRO1854Q9UHT4 67 aa0.49□□□□□ -2.33
HMGB1P27-201ENST00000431429 SPATA8Q6RVD6 105 aa0.48□□□□□ -2.33
HMGB1P27-201ENST00000431429 SVBPQ8N300 66 aa0.48□□□□□ -2.33
HMGB1P27-201ENST00000431429 K7EP34 96 aa0.47□□□□□ -2.33
HMGB1P27-201ENST00000431429 DLEU1O43261 78 aa0.47□□□□□ -2.33
HMGB1P27-201ENST00000431429 S100A1P23297 94 aa0.47□□□□□ -2.33
HMGB1P27-201ENST00000431429 A0A1B0GV90 55 aa0.46□□□□□ -2.34
HMGB1P27-201ENST00000431429 ATOX1O00244 68 aa0.46□□□□□ -2.34
HMGB1P27-201ENST00000431429 TNP1P09430 55 aa0.46□□□□□ -2.34
HMGB1P27-201ENST00000431429 ATP5EP56381 51 aaPredicted RBP0.46□□□□□ -2.34
HMGB1P27-201ENST00000431429 KRTAP6-2Q3LI66 62 aa0.46□□□□□ -2.34
HMGB1P27-201ENST00000431429 GTF2H5Q6ZYL4 71 aa0.46□□□□□ -2.34
HMGB1P27-201ENST00000431429 VAMP8Q9BV40 100 aa0.46□□□□□ -2.34
HMGB1P27-201ENST00000431429 PHGR1C9JFL3 82 aa0.45□□□□□ -2.34
HMGB1P27-201ENST00000431429 APOC3P02656 99 aa0.45□□□□□ -2.34
HMGB1P27-201ENST00000431429 MT1AP04731 61 aa0.45□□□□□ -2.34
HMGB1P27-201ENST00000431429 ATXN8Q156A1 80 aa0.45□□□□□ -2.34
HMGB1P27-201ENST00000431429 UBL5Q9BZL1 73 aa0.44□□□□□ -2.34
HMGB1P27-201ENST00000431429 UQCR10Q9UDW1 63 aa0.44□□□□□ -2.34
HMGB1P27-201ENST00000431429 COX8AP10176 69 aa0.43□□□□□ -2.34
HMGB1P27-201ENST00000431429 KRTAP6-1Q3LI64 71 aa0.43□□□□□ -2.34
HMGB1P27-201ENST00000431429 H0Y9P7 68 aa0.41□□□□□ -2.34
HMGB1P27-201ENST00000431429 UQCR11O14957 56 aa0.41□□□□□ -2.34
HMGB1P27-201ENST00000431429 KRTAP21-1Q3LI58 79 aa0.41□□□□□ -2.34
HMGB1P27-201ENST00000431429 CHKB-CPT1BH3BT56 60 aa0.4□□□□□ -2.35
HMGB1P27-201ENST00000431429 C14orf144Q96I85 54 aa0.4□□□□□ -2.35
HMGB1P27-201ENST00000431429 SPCS1Q9Y6A9 102 aa0.4□□□□□ -2.35
HMGB1P27-201ENST00000431429 HSD52Q0P140 79 aa0.39□□□□□ -2.35
HMGB1P27-201ENST00000431429 H7BZZ5 65 aa0.36□□□□□ -2.35
HMGB1P27-201ENST00000431429 SERP2Q8N6R1 65 aa0.36□□□□□ -2.35
HMGB1P27-201ENST00000431429 LINC01558Q9Y6Z2 57 aa0.36□□□□□ -2.35
HMGB1P27-201ENST00000431429 M0R143 59 aa0.34□□□□□ -2.36
HMGB1P27-201ENST00000431429 ATP5EP2Q5VTU8 51 aa0.33□□□□□ -2.36
HMGB1P27-201ENST00000431429 COL5A1-AS1Q5SY13 56 aa0.32□□□□□ -2.36
HMGB1P27-201ENST00000431429 A0A1B0GU69 56 aa0.29□□□□□ -2.36
HMGB1P27-201ENST00000431429 ETDBQ3ZM63 59 aa0.28□□□□□ -2.36
HMGB1P27-201ENST00000431429 PYY3Q5JQD4 70 aa0.28□□□□□ -2.36
HMGB1P27-201ENST00000431429 LINC00643Q86TS7 51 aa0.28□□□□□ -2.36
HMGB1P27-201ENST00000431429 PRM1P04553 51 aa0.09□□□□□ -2.4
Retrieved 77 of 20,778 RNA–protein pairs in 11.3 ms