RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 KRTAP12-3P60328 96 aa1.95□□□□□ -2.1
PTPN4-203ENST00000430976 LCE3DQ9BYE3 92 aa1.94□□□□□ -2.1
PTPN4-203ENST00000430976 LPAP08519 4548 aa1.94□□□□□ -2.1
PTPN4-203ENST00000430976 MUC2Q02817 5179 aa1.93□□□□□ -2.1
PTPN4-203ENST00000430976 MT3P25713 68 aa1.93□□□□□ -2.1
PTPN4-203ENST00000430976 LRP2P98164 4655 aa1.92□□□□□ -2.1
PTPN4-203ENST00000430976 KRTAP6-3Q3LI67 103 aa1.91□□□□□ -2.1
PTPN4-203ENST00000430976 KRTAP20-1Q3LI63 56 aa1.9□□□□□ -2.1
PTPN4-203ENST00000430976 KRTAP9-8Q9BYQ0 159 aa1.89□□□□□ -2.11
PTPN4-203ENST00000430976 HMCN1Q96RW7 5635 aa1.88□□□□□ -2.11
PTPN4-203ENST00000430976 FLGP20930 4061 aaPredicted RBP1.86□□□□□ -2.11
PTPN4-203ENST00000430976 MUC17Q685J3 4493 aa1.85□□□□□ -2.11
PTPN4-203ENST00000430976 FSIP2Q5CZC0 6907 aa1.82□□□□□ -2.12
PTPN4-203ENST00000430976 KRTAP10-7P60409 375 aaPredicted RBP1.81□□□□□ -2.12
PTPN4-203ENST00000430976 KRTAP10-12P60413 245 aa1.8□□□□□ -2.12
PTPN4-203ENST00000430976 PRM1P04553 51 aa1.8□□□□□ -2.12
PTPN4-203ENST00000430976 KRTAP8-1Q8IUC2 63 aa1.77□□□□□ -2.13
PTPN4-203ENST00000430976 MT1HL1P0DM35 61 aa1.76□□□□□ -2.13
PTPN4-203ENST00000430976 NEBP20929 6669 aa1.74□□□□□ -2.13
PTPN4-203ENST00000430976 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.69□□□□□ -2.14
PTPN4-203ENST00000430976 KRTAP9-6A8MVA2 160 aa1.66□□□□□ -2.14
PTPN4-203ENST00000430976 SSPOA2VEC9 5147 aa1.65□□□□□ -2.14
PTPN4-203ENST00000430976 KRTAP2-3P0C7H8 128 aa1.65□□□□□ -2.14
PTPN4-203ENST00000430976 KRTAP2-4Q9BYR9 128 aa1.65□□□□□ -2.14
PTPN4-203ENST00000430976 KRTAP2-1Q9BYU5 128 aa1.65□□□□□ -2.14
PTPN4-203ENST00000430976 KRTAP19-5Q3LI72 72 aa1.65□□□□□ -2.15
PTPN4-203ENST00000430976 KMT2DO14686 5537 aa1.64□□□□□ -2.15
PTPN4-203ENST00000430976 USH2AO75445 5202 aa1.64□□□□□ -2.15
PTPN4-203ENST00000430976 KRTAP19-2Q3LHN2 52 aa1.61□□□□□ -2.15
PTPN4-203ENST00000430976 KRTAP4-1Q9BYQ7 146 aa1.6□□□□□ -2.15
PTPN4-203ENST00000430976 AHNAKQ09666 5890 aaKnown RBP1.6□□□□□ -2.15
PTPN4-203ENST00000430976 FCGBPQ9Y6R7 5405 aaPredicted RBP1.6□□□□□ -2.15
PTPN4-203ENST00000430976 SPRR2GQ9BYE4 73 aa1.53□□□□□ -2.16
PTPN4-203ENST00000430976 SPRR2EP22531 72 aa1.51□□□□□ -2.17
PTPN4-203ENST00000430976 SPRR2BP35325 72 aa1.51□□□□□ -2.17
PTPN4-203ENST00000430976 SPRR2AP35326 72 aa1.51□□□□□ -2.17
PTPN4-203ENST00000430976 MDN1Q9NU22 5596 aa1.51□□□□□ -2.17
PTPN4-203ENST00000430976 MT1XP80297 61 aa1.5□□□□□ -2.17
PTPN4-203ENST00000430976 MUC12Q9UKN1 5478 aa1.5□□□□□ -2.17
PTPN4-203ENST00000430976 MT1HP80294 61 aa1.5□□□□□ -2.17
PTPN4-203ENST00000430976 MT1GP13640 62 aa1.49□□□□□ -2.17
PTPN4-203ENST00000430976 SPRR2DP22532 72 aa1.49□□□□□ -2.17
PTPN4-203ENST00000430976 MUC5BQ9HC84 5762 aaPredicted RBP1.48□□□□□ -2.17
PTPN4-203ENST00000430976 KRTAP5-11Q6L8G4 156 aa1.45□□□□□ -2.18
PTPN4-203ENST00000430976 KRTAP6-2Q3LI66 62 aa1.44□□□□□ -2.18
PTPN4-203ENST00000430976 SPRR2FQ96RM1 72 aa1.44□□□□□ -2.18
PTPN4-203ENST00000430976 AHNAK2Q8IVF2 5795 aa1.44□□□□□ -2.18
PTPN4-203ENST00000430976 KRTAP5-9P26371 169 aa1.43□□□□□ -2.18
PTPN4-203ENST00000430976 KRTAP4-3Q9BYR4 195 aa1.42□□□□□ -2.18
PTPN4-203ENST00000430976 MT1FP04733 61 aa1.41□□□□□ -2.18
PTPN4-203ENST00000430976 KRTAP5-2Q701N4 177 aa1.4□□□□□ -2.19
PTPN4-203ENST00000430976 KRTAP19-6Q3LI70 58 aa1.4□□□□□ -2.19
PTPN4-203ENST00000430976 MT1BP07438 61 aa1.39□□□□□ -2.19
PTPN4-203ENST00000430976 KRTAP5-5Q701N2 237 aaPredicted RBP1.38□□□□□ -2.19
PTPN4-203ENST00000430976 MT2AP02795 61 aa1.38□□□□□ -2.19
PTPN4-203ENST00000430976 LCE1CQ5T751 118 aa1.37□□□□□ -2.19
PTPN4-203ENST00000430976 LCE1BQ5T7P3 118 aa1.37□□□□□ -2.19
PTPN4-203ENST00000430976 MT4P47944 62 aa1.37□□□□□ -2.19
PTPN4-203ENST00000430976 KRTAP5-4Q6L8H1 288 aa1.37□□□□□ -2.19
PTPN4-203ENST00000430976 MT1LQ93083 61 aa1.35□□□□□ -2.19
PTPN4-203ENST00000430976 KRTAP19-3Q7Z4W3 81 aa1.34□□□□□ -2.19
PTPN4-203ENST00000430976 KRTAP19-8Q3LI54 63 aa1.33□□□□□ -2.2
PTPN4-203ENST00000430976 KRTAP4-4Q9BYR3 166 aa1.31□□□□□ -2.2
PTPN4-203ENST00000430976 KRTAP19-7Q3SYF9 63 aa1.3□□□□□ -2.2
PTPN4-203ENST00000430976 MT1EP04732 61 aa1.26□□□□□ -2.21
PTPN4-203ENST00000430976 MT1AP04731 61 aa1.24□□□□□ -2.21
PTPN4-203ENST00000430976 KRTAP6-1Q3LI64 71 aa1.21□□□□□ -2.22
PTPN4-203ENST00000430976 KRTAP5-10Q6L8G5 202 aa1.2□□□□□ -2.22
PTPN4-203ENST00000430976 KRTAP5-1Q6L8H4 278 aa1.19□□□□□ -2.22
PTPN4-203ENST00000430976 MT1MQ8N339 61 aa1.18□□□□□ -2.22
PTPN4-203ENST00000430976 KRTAP5-7Q6L8G8 165 aa1.16□□□□□ -2.22
PTPN4-203ENST00000430976 PHGR1C9JFL3 82 aa1.07□□□□□ -2.24
PTPN4-203ENST00000430976 KRTAP5-8O75690 187 aa1.04□□□□□ -2.24
PTPN4-203ENST00000430976 MUC5ACP98088 5654 aa1.03□□□□□ -2.24
PTPN4-203ENST00000430976 KRTAP20-2Q3LI61 65 aa0.95□□□□□ -2.26
PTPN4-203ENST00000430976 KRTAP21-1Q3LI58 79 aa0.94□□□□□ -2.26
PTPN4-203ENST00000430976 KRTAP21-2Q3LI59 83 aa0.71□□□□□ -2.3
PTPN4-203ENST00000430976 MUC16Q8WXI7 14507 aa0.57□□□□□ -2.32
Retrieved 78 of 20,778 RNA–protein pairs in 60.5 ms