RNA–Protein interactions for RNA: ENST00000430725.6

PACS2-202, Transcript of phosphofurin acidic cluster sorting protein 2, humanhuman

TSL 1 (best) BASIC

Gene PACS2, Length 2,944 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2-202ENST00000430725 CRCT1Q9UGL9 99 aa5.82□□□□□ -1.48
PACS2-202ENST00000430725 KRTAP4-3Q9BYR4 195 aa5.82□□□□□ -1.48
PACS2-202ENST00000430725 MACF1Q9UPN3 7388 aaKnown RBP5.79□□□□□ -1.48
PACS2-202ENST00000430725 LOC100996750A0A140TA64 210 aa5.77□□□□□ -1.49
PACS2-202ENST00000430725 DSTQ03001 7570 aaKnown RBP5.76□□□□□ -1.49
PACS2-202ENST00000430725 SYNE2Q8WXH0 6885 aaKnown RBP5.73□□□□□ -1.49
PACS2-202ENST00000430725 KRTAP2-3P0C7H8 128 aa5.67□□□□□ -1.5
PACS2-202ENST00000430725 KRTAP2-4Q9BYR9 128 aa5.67□□□□□ -1.5
PACS2-202ENST00000430725 KRTAP2-1Q9BYU5 128 aa5.67□□□□□ -1.5
PACS2-202ENST00000430725 MT1GP13640 62 aa5.65□□□□□ -1.5
PACS2-202ENST00000430725 SPRR2FQ96RM1 72 aa5.64□□□□□ -1.51
PACS2-202ENST00000430725 KRTAP19-4Q3LI73 84 aa5.63□□□□□ -1.51
PACS2-202ENST00000430725 KRTAP19-3Q7Z4W3 81 aa5.61□□□□□ -1.51
PACS2-202ENST00000430725 MT1MQ8N339 61 aa5.59□□□□□ -1.51
PACS2-202ENST00000430725 KRTAP9-6A0A140TA67 174 aa5.56□□□□□ -1.52
PACS2-202ENST00000430725 MDN1Q9NU22 5596 aa5.48□□□□□ -1.53
PACS2-202ENST00000430725 LCE5AQ5TCM9 118 aa5.44□□□□□ -1.54
PACS2-202ENST00000430725 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.38□□□□□ -1.55
PACS2-202ENST00000430725 SYNE1Q8NF91 8797 aaKnown RBP5.37□□□□□ -1.55
PACS2-202ENST00000430725 KRTAP12-4P60329 112 aa5.26□□□□□ -1.57
PACS2-202ENST00000430725 LCE3BQ5TA77 95 aa5.24□□□□□ -1.57
PACS2-202ENST00000430725 OBSCNQ5VST9 7968 aa5.23□□□□□ -1.57
PACS2-202ENST00000430725 KRTAP5-9P26371 169 aa5.23□□□□□ -1.57
PACS2-202ENST00000430725 LCE1AQ5T7P2 110 aa5.22□□□□□ -1.57
PACS2-202ENST00000430725 KRTAP4-9Q9BYQ8 210 aa5.2□□□□□ -1.58
PACS2-202ENST00000430725 SPRR2EP22531 72 aa5.19□□□□□ -1.58
PACS2-202ENST00000430725 SPRR2BP35325 72 aa5.19□□□□□ -1.58
PACS2-202ENST00000430725 SPRR2AP35326 72 aa5.19□□□□□ -1.58
PACS2-202ENST00000430725 KRTAP6-3Q3LI67 103 aa5.16□□□□□ -1.58
PACS2-202ENST00000430725 KRTAP9-7A8MTY7 169 aa5.12□□□□□ -1.59
PACS2-202ENST00000430725 KRTAP6-1Q3LI64 71 aa5.09□□□□□ -1.59
PACS2-202ENST00000430725 SPRR2DP22532 72 aa4.97□□□□□ -1.61
PACS2-202ENST00000430725 MT1AP04731 61 aa4.94□□□□□ -1.62
PACS2-202ENST00000430725 NEBP20929 6669 aa4.94□□□□□ -1.62
PACS2-202ENST00000430725 KRTAP5-5Q701N2 237 aaPredicted RBP4.9□□□□□ -1.63
PACS2-202ENST00000430725 LCE3DQ9BYE3 92 aa4.78□□□□□ -1.64
PACS2-202ENST00000430725 PRM1P04553 51 aa4.73□□□□□ -1.65
PACS2-202ENST00000430725 LCE3EQ5T5B0 92 aa4.68□□□□□ -1.66
PACS2-202ENST00000430725 KRTAP9-4Q9BYQ2 154 aa4.68□□□□□ -1.66
PACS2-202ENST00000430725 KRTAP6-2Q3LI66 62 aa4.59□□□□□ -1.68
PACS2-202ENST00000430725 KRTAP20-1Q3LI63 56 aa4.49□□□□□ -1.69
PACS2-202ENST00000430725 MT3P25713 68 aa4.47□□□□□ -1.69
PACS2-202ENST00000430725 KRTAP2-2Q9BYT5 123 aa4.45□□□□□ -1.7
PACS2-202ENST00000430725 MT4P47944 62 aa4.44□□□□□ -1.7
PACS2-202ENST00000430725 KRTAP5-4Q6L8H1 288 aa4.42□□□□□ -1.7
PACS2-202ENST00000430725 KRTAP4-6Q9BYQ5 205 aa4.4□□□□□ -1.7
PACS2-202ENST00000430725 HMCN1Q96RW7 5635 aa4.27□□□□□ -1.73
PACS2-202ENST00000430725 LCE4AQ5TA78 99 aa4.25□□□□□ -1.73
PACS2-202ENST00000430725 LCE1DQ5T752 114 aa4.24□□□□□ -1.73
PACS2-202ENST00000430725 KRTAP20-2Q3LI61 65 aa4.22□□□□□ -1.73
PACS2-202ENST00000430725 KRTAP5-2Q701N4 177 aa4.08□□□□□ -1.76
PACS2-202ENST00000430725 KRTAP5-3Q6L8H2 238 aa3.99□□□□□ -1.77
PACS2-202ENST00000430725 LCE1EQ5T753 118 aa3.98□□□□□ -1.77
PACS2-202ENST00000430725 MUC5ACP98088 5654 aa3.86□□□□□ -1.79
PACS2-202ENST00000430725 LCE1BQ5T7P3 118 aa3.77□□□□□ -1.81
PACS2-202ENST00000430725 AHNAK2Q8IVF2 5795 aa3.68□□□□□ -1.82
PACS2-202ENST00000430725 KRTAP4-11Q9BYQ6 195 aa3.63□□□□□ -1.83
PACS2-202ENST00000430725 KRTAP5-1Q6L8H4 278 aa3.54□□□□□ -1.84
PACS2-202ENST00000430725 KRTAP4-2Q9BYR5 136 aa3.52□□□□□ -1.85
PACS2-202ENST00000430725 KRTAP5-10Q6L8G5 202 aa3.49□□□□□ -1.85
PACS2-202ENST00000430725 LCE1CQ5T751 118 aa3.46□□□□□ -1.86
PACS2-202ENST00000430725 KRTAP5-8O75690 187 aa3.45□□□□□ -1.86
PACS2-202ENST00000430725 GPR98Q8WXG9 6306 aa3.43□□□□□ -1.86
PACS2-202ENST00000430725 MUC19Q7Z5P9 8384 aa3.41□□□□□ -1.86
PACS2-202ENST00000430725 KRTAP21-2Q3LI59 83 aa3.23□□□□□ -1.89
PACS2-202ENST00000430725 LCE1FQ5T754 118 aa3.23□□□□□ -1.89
PACS2-202ENST00000430725 MUC5BQ9HC84 5762 aaPredicted RBP3.21□□□□□ -1.9
PACS2-202ENST00000430725 KRTAP5-7Q6L8G8 165 aa3.2□□□□□ -1.9
PACS2-202ENST00000430725 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.2□□□□□ -1.9
PACS2-202ENST00000430725 KRTAP4-4Q9BYR3 166 aa3.19□□□□□ -1.9
PACS2-202ENST00000430725 KRTAP9-9Q9BYP9 154 aa3.12□□□□□ -1.91
PACS2-202ENST00000430725 KRTAP4-12Q9BQ66 201 aa3.03□□□□□ -1.92
PACS2-202ENST00000430725 KRTAP5-11Q6L8G4 156 aa2.99□□□□□ -1.93
PACS2-202ENST00000430725 KRTAP21-1Q3LI58 79 aa2.81□□□□□ -1.96
PACS2-202ENST00000430725 AHNAKQ09666 5890 aaKnown RBP2.76□□□□□ -1.97
PACS2-202ENST00000430725 PHGR1C9JFL3 82 aa2.6□□□□□ -1.99
PACS2-202ENST00000430725 MUC16Q8WXI7 14507 aa1.71□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 6.7 ms