RNA–Protein interactions for RNA: ENST00000428552.1

CSTF1-203, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 3

Gene CSTF1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-203ENST00000428552 HMCN1Q96RW7 5635 aa3.24□□□□□ -1.89
CSTF1-203ENST00000428552 KRTAP10-7P60409 375 aaPredicted RBP3.23□□□□□ -1.89
CSTF1-203ENST00000428552 MT3P25713 68 aa3.22□□□□□ -1.89
CSTF1-203ENST00000428552 KRTAP10-12P60413 245 aa3.22□□□□□ -1.89
CSTF1-203ENST00000428552 KRTAP4-2Q9BYR5 136 aa3.22□□□□□ -1.89
CSTF1-203ENST00000428552 H0YAA0 97 aa3.2□□□□□ -1.9
CSTF1-203ENST00000428552 AHNAK2Q8IVF2 5795 aa3.19□□□□□ -1.9
CSTF1-203ENST00000428552 KRTAP4-11Q9BYQ6 195 aa3.19□□□□□ -1.9
CSTF1-203ENST00000428552 ATP5EP2Q5VTU8 51 aa3.18□□□□□ -1.9
CSTF1-203ENST00000428552 PLAC4Q8WY50 150 aa3.18□□□□□ -1.9
CSTF1-203ENST00000428552 ATXN8Q156A1 80 aa3.16□□□□□ -1.9
CSTF1-203ENST00000428552 LINC01558Q9Y6Z2 57 aa3.16□□□□□ -1.9
CSTF1-203ENST00000428552 KRTAP5-10Q6L8G5 202 aa3.14□□□□□ -1.91
CSTF1-203ENST00000428552 PRR15LQ9BU68 103 aa3.14□□□□□ -1.91
CSTF1-203ENST00000428552 UQCR11O14957 56 aa3.12□□□□□ -1.91
CSTF1-203ENST00000428552 INE1O15225 51 aa3.12□□□□□ -1.91
CSTF1-203ENST00000428552 MT4P47944 62 aa3.07□□□□□ -1.92
CSTF1-203ENST00000428552 KRTAP19-7Q3SYF9 63 aa3.06□□□□□ -1.92
CSTF1-203ENST00000428552 KRTAP5-7Q6L8G8 165 aa3.05□□□□□ -1.92
CSTF1-203ENST00000428552 KRTAP19-3Q7Z4W3 81 aa3.05□□□□□ -1.92
CSTF1-203ENST00000428552 COA5Q86WW8 74 aa3.05□□□□□ -1.92
CSTF1-203ENST00000428552 TP53AIP1Q9HCN2 124 aa3.05□□□□□ -1.92
CSTF1-203ENST00000428552 M0QZ58 72 aa3.04□□□□□ -1.92
CSTF1-203ENST00000428552 SNURFQ9Y675 71 aa3.04□□□□□ -1.92
CSTF1-203ENST00000428552 MT1EP04732 61 aa3.03□□□□□ -1.92
CSTF1-203ENST00000428552 LINC00208Q96KT6 92 aa3.02□□□□□ -1.93
CSTF1-203ENST00000428552 SPATA8Q6RVD6 105 aa3□□□□□ -1.93
CSTF1-203ENST00000428552 H0Y9P7 68 aa2.99□□□□□ -1.93
CSTF1-203ENST00000428552 KRTAP5-4Q6L8H1 288 aa2.99□□□□□ -1.93
CSTF1-203ENST00000428552 KRTAP5-3Q6L8H2 238 aa2.97□□□□□ -1.93
CSTF1-203ENST00000428552 UBL5Q9BZL1 73 aa2.95□□□□□ -1.94
CSTF1-203ENST00000428552 ACYP2P14621 99 aa2.93□□□□□ -1.94
CSTF1-203ENST00000428552 MT1GP13640 62 aa2.92□□□□□ -1.94
CSTF1-203ENST00000428552 MT1MQ8N339 61 aa2.9□□□□□ -1.95
CSTF1-203ENST00000428552 SPRR5A0A1B0GTR4 108 aa2.88□□□□□ -1.95
CSTF1-203ENST00000428552 LCE1FQ5T754 118 aa2.88□□□□□ -1.95
CSTF1-203ENST00000428552 PP632Q6XCG6 107 aa2.88□□□□□ -1.95
CSTF1-203ENST00000428552 KRTAP4-3Q9BYR4 195 aa2.88□□□□□ -1.95
CSTF1-203ENST00000428552 KRTAP19-5Q3LI72 72 aa2.86□□□□□ -1.95
CSTF1-203ENST00000428552 MT1LQ93083 61 aa2.84□□□□□ -1.95
CSTF1-203ENST00000428552 KRTAP20-2Q3LI61 65 aa2.82□□□□□ -1.96
CSTF1-203ENST00000428552 A0A1B0GU69 56 aa2.81□□□□□ -1.96
CSTF1-203ENST00000428552 A0A0D9SG42 100 aa2.76□□□□□ -1.97
CSTF1-203ENST00000428552 KRTAP13-4Q3LI77 160 aa2.76□□□□□ -1.97
CSTF1-203ENST00000428552 KRTAP5-5Q701N2 237 aaPredicted RBP2.73□□□□□ -1.97
CSTF1-203ENST00000428552 AHNAKQ09666 5890 aaKnown RBP2.73□□□□□ -1.97
CSTF1-203ENST00000428552 MUC5ACP98088 5654 aa2.7□□□□□ -1.98
CSTF1-203ENST00000428552 MUC5BQ9HC84 5762 aaPredicted RBP2.69□□□□□ -1.98
CSTF1-203ENST00000428552 SYNE1Q8NF91 8797 aaKnown RBP2.65□□□□□ -1.98
CSTF1-203ENST00000428552 C10orf95Q9H7T3 257 aa2.65□□□□□ -1.99
CSTF1-203ENST00000428552 KRTAP12-4P60329 112 aa2.64□□□□□ -1.99
CSTF1-203ENST00000428552 LCE3CQ5T5A8 94 aa2.63□□□□□ -1.99
CSTF1-203ENST00000428552 LCE3AQ5TA76 89 aa2.62□□□□□ -1.99
CSTF1-203ENST00000428552 KRTAP5-8O75690 187 aa2.6□□□□□ -1.99
CSTF1-203ENST00000428552 KRTAP5-2Q701N4 177 aa2.57□□□□□ -2
CSTF1-203ENST00000428552 KRTAP12-1P59990 96 aa2.54□□□□□ -2
CSTF1-203ENST00000428552 KRTAP12-3P60328 96 aa2.49□□□□□ -2.01
CSTF1-203ENST00000428552 TNP1P09430 55 aa2.44□□□□□ -2.02
CSTF1-203ENST00000428552 OBSCNQ5VST9 7968 aa2.43□□□□□ -2.02
CSTF1-203ENST00000428552 KRTAP6-1Q3LI64 71 aa2.42□□□□□ -2.02
CSTF1-203ENST00000428552 LCE1EQ5T753 118 aa2.4□□□□□ -2.03
CSTF1-203ENST00000428552 MT1AP04731 61 aa2.39□□□□□ -2.03
CSTF1-203ENST00000428552 LCE3EQ5T5B0 92 aa2.39□□□□□ -2.03
CSTF1-203ENST00000428552 KRTAP6-2Q3LI66 62 aa2.37□□□□□ -2.03
CSTF1-203ENST00000428552 KRTAP5-1Q6L8H4 278 aa2.37□□□□□ -2.03
CSTF1-203ENST00000428552 KRTAP9-6A8MVA2 160 aa2.23□□□□□ -2.05
CSTF1-203ENST00000428552 LCE3DQ9BYE3 92 aa2.21□□□□□ -2.06
CSTF1-203ENST00000428552 KRTAP5-11Q6L8G4 156 aa2.17□□□□□ -2.06
CSTF1-203ENST00000428552 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.13□□□□□ -2.07
CSTF1-203ENST00000428552 LCE1BQ5T7P3 118 aa1.98□□□□□ -2.09
CSTF1-203ENST00000428552 LCE1CQ5T751 118 aa1.95□□□□□ -2.1
CSTF1-203ENST00000428552 PHGR1C9JFL3 82 aa1.81□□□□□ -2.12
CSTF1-203ENST00000428552 KRTAP4-4Q9BYR3 166 aa1.81□□□□□ -2.12
CSTF1-203ENST00000428552 KRTAP21-2Q3LI59 83 aa1.62□□□□□ -2.15
CSTF1-203ENST00000428552 MUC19Q7Z5P9 8384 aa1.51□□□□□ -2.17
CSTF1-203ENST00000428552 KRTAP21-1Q3LI58 79 aa1.37□□□□□ -2.19
CSTF1-203ENST00000428552 PRM1P04553 51 aa1.34□□□□□ -2.19
CSTF1-203ENST00000428552 MUC16Q8WXI7 14507 aa1.06□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 45.1 ms