RNA–Protein interactions for RNA: ENST00000428154.5

PMPCB-202, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 1 (best) BASIC

Gene PMPCB, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-202ENST00000428154 KRTAP2-4Q9BYR9 128 aa6.78□□□□□ -1.32
PMPCB-202ENST00000428154 KRTAP2-1Q9BYU5 128 aa6.78□□□□□ -1.32
PMPCB-202ENST00000428154 MT1GP13640 62 aa6.72□□□□□ -1.33
PMPCB-202ENST00000428154 KRTAP19-3Q7Z4W3 81 aa6.7□□□□□ -1.34
PMPCB-202ENST00000428154 MT1MQ8N339 61 aa6.62□□□□□ -1.35
PMPCB-202ENST00000428154 FCGBPQ9Y6R7 5405 aaPredicted RBP6.54□□□□□ -1.36
PMPCB-202ENST00000428154 FSIP2Q5CZC0 6907 aa6.49□□□□□ -1.37
PMPCB-202ENST00000428154 LCE5AQ5TCM9 118 aa6.48□□□□□ -1.37
PMPCB-202ENST00000428154 SPRR2FQ96RM1 72 aa6.45□□□□□ -1.38
PMPCB-202ENST00000428154 KRTAP4-3Q9BYR4 195 aa6.45□□□□□ -1.38
PMPCB-202ENST00000428154 MUC12Q9UKN1 5478 aa6.28□□□□□ -1.4
PMPCB-202ENST00000428154 KRTAP9-2Q9BYQ4 174 aa6.24□□□□□ -1.41
PMPCB-202ENST00000428154 KRTAP5-9P26371 169 aa6.21□□□□□ -1.42
PMPCB-202ENST00000428154 CRCT1Q9UGL9 99 aa6.17□□□□□ -1.42
PMPCB-202ENST00000428154 MACF1Q9UPN3 7388 aaKnown RBP6.13□□□□□ -1.43
PMPCB-202ENST00000428154 LCE1AQ5T7P2 110 aa6.09□□□□□ -1.43
PMPCB-202ENST00000428154 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.08□□□□□ -1.44
PMPCB-202ENST00000428154 KRTAP9-6A0A140TA67 174 aa6.04□□□□□ -1.44
PMPCB-202ENST00000428154 MT1AP04731 61 aa5.99□□□□□ -1.45
PMPCB-202ENST00000428154 SPRR2EP22531 72 aa5.95□□□□□ -1.46
PMPCB-202ENST00000428154 SPRR2BP35325 72 aa5.95□□□□□ -1.46
PMPCB-202ENST00000428154 SPRR2AP35326 72 aa5.95□□□□□ -1.46
PMPCB-202ENST00000428154 KRTAP5-5Q701N2 237 aaPredicted RBP5.91□□□□□ -1.46
PMPCB-202ENST00000428154 KRTAP6-1Q3LI64 71 aa5.9□□□□□ -1.47
PMPCB-202ENST00000428154 LCE3BQ5TA77 95 aa5.88□□□□□ -1.47
PMPCB-202ENST00000428154 KRTAP12-4P60329 112 aa5.86□□□□□ -1.47
PMPCB-202ENST00000428154 DSTQ03001 7570 aaKnown RBP5.85□□□□□ -1.47
PMPCB-202ENST00000428154 SYNE2Q8WXH0 6885 aaKnown RBP5.84□□□□□ -1.47
PMPCB-202ENST00000428154 KRTAP6-3Q3LI67 103 aa5.8□□□□□ -1.48
PMPCB-202ENST00000428154 MDN1Q9NU22 5596 aa5.77□□□□□ -1.49
PMPCB-202ENST00000428154 KRTAP9-9Q9BYP9 154 aa5.75□□□□□ -1.49
PMPCB-202ENST00000428154 KRTAP9-4Q9BYQ2 154 aa5.75□□□□□ -1.49
PMPCB-202ENST00000428154 SPRR2DP22532 72 aa5.73□□□□□ -1.49
PMPCB-202ENST00000428154 LCE3DQ9BYE3 92 aa5.65□□□□□ -1.51
PMPCB-202ENST00000428154 KRTAP4-12Q9BQ66 201 aa5.62□□□□□ -1.51
PMPCB-202ENST00000428154 KRTAP4-9Q9BYQ8 210 aa5.61□□□□□ -1.51
PMPCB-202ENST00000428154 LCE3EQ5T5B0 92 aa5.58□□□□□ -1.52
PMPCB-202ENST00000428154 SYNE1Q8NF91 8797 aaKnown RBP5.53□□□□□ -1.52
PMPCB-202ENST00000428154 LCE1DQ5T752 114 aa5.48□□□□□ -1.53
PMPCB-202ENST00000428154 MT3P25713 68 aa5.43□□□□□ -1.54
PMPCB-202ENST00000428154 KRTAP4-2Q9BYR5 136 aa5.41□□□□□ -1.54
PMPCB-202ENST00000428154 KRTAP5-4Q6L8H1 288 aa5.35□□□□□ -1.55
PMPCB-202ENST00000428154 KRTAP6-2Q3LI66 62 aa5.31□□□□□ -1.56
PMPCB-202ENST00000428154 KRTAP5-3Q6L8H2 238 aa5.31□□□□□ -1.56
PMPCB-202ENST00000428154 NEBP20929 6669 aa5.17□□□□□ -1.58
PMPCB-202ENST00000428154 LCE4AQ5TA78 99 aa5.14□□□□□ -1.59
PMPCB-202ENST00000428154 KRTAP9-7A8MTY7 169 aa5.13□□□□□ -1.59
PMPCB-202ENST00000428154 PRM1P04553 51 aa5.12□□□□□ -1.59
PMPCB-202ENST00000428154 KRTAP4-11Q9BYQ6 195 aa5.08□□□□□ -1.6
PMPCB-202ENST00000428154 KRTAP5-2Q701N4 177 aa4.97□□□□□ -1.61
PMPCB-202ENST00000428154 KRTAP20-2Q3LI61 65 aa4.95□□□□□ -1.62
PMPCB-202ENST00000428154 MT4P47944 62 aa4.91□□□□□ -1.62
PMPCB-202ENST00000428154 KRTAP2-2Q9BYT5 123 aa4.88□□□□□ -1.63
PMPCB-202ENST00000428154 KRTAP20-1Q3LI63 56 aa4.83□□□□□ -1.64
PMPCB-202ENST00000428154 OBSCNQ5VST9 7968 aa4.81□□□□□ -1.64
PMPCB-202ENST00000428154 HMCN1Q96RW7 5635 aa4.6□□□□□ -1.67
PMPCB-202ENST00000428154 LCE1EQ5T753 118 aa4.58□□□□□ -1.68
PMPCB-202ENST00000428154 MUC5ACP98088 5654 aa4.31□□□□□ -1.72
PMPCB-202ENST00000428154 KRTAP5-10Q6L8G5 202 aa4.27□□□□□ -1.73
PMPCB-202ENST00000428154 LCE1CQ5T751 118 aa4.26□□□□□ -1.73
PMPCB-202ENST00000428154 LCE1BQ5T7P3 118 aa4.26□□□□□ -1.73
PMPCB-202ENST00000428154 KRTAP5-1Q6L8H4 278 aa4.18□□□□□ -1.74
PMPCB-202ENST00000428154 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.07□□□□□ -1.76
PMPCB-202ENST00000428154 KRTAP5-8O75690 187 aa4.03□□□□□ -1.76
PMPCB-202ENST00000428154 KRTAP5-7Q6L8G8 165 aa4.01□□□□□ -1.77
PMPCB-202ENST00000428154 KRTAP21-2Q3LI59 83 aa3.86□□□□□ -1.79
PMPCB-202ENST00000428154 AHNAK2Q8IVF2 5795 aa3.77□□□□□ -1.81
PMPCB-202ENST00000428154 KRTAP5-11Q6L8G4 156 aa3.69□□□□□ -1.82
PMPCB-202ENST00000428154 GPR98Q8WXG9 6306 aa3.53□□□□□ -1.84
PMPCB-202ENST00000428154 LCE1FQ5T754 118 aa3.4□□□□□ -1.87
PMPCB-202ENST00000428154 KRTAP4-4Q9BYR3 166 aa3.32□□□□□ -1.88
PMPCB-202ENST00000428154 KRTAP21-1Q3LI58 79 aa3.29□□□□□ -1.88
PMPCB-202ENST00000428154 MUC5BQ9HC84 5762 aaPredicted RBP3.27□□□□□ -1.89
PMPCB-202ENST00000428154 PHGR1C9JFL3 82 aa3.14□□□□□ -1.91
PMPCB-202ENST00000428154 MUC19Q7Z5P9 8384 aa2.9□□□□□ -1.95
PMPCB-202ENST00000428154 AHNAKQ09666 5890 aaKnown RBP2.71□□□□□ -1.98
PMPCB-202ENST00000428154 MUC16Q8WXI7 14507 aa2.12□□□□□ -2.07
Retrieved 77 of 20,778 RNA–protein pairs in 39.7 ms