RNA–Protein interactions for RNA: ENST00000427482.6

SH3GL3-202, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3GL3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-202ENST00000427482 MUC12Q9UKN1 5478 aa9.13□□□□□ -0.95
SH3GL3-202ENST00000427482 MT1GP13640 62 aa9.08□□□□□ -0.96
SH3GL3-202ENST00000427482 KRTAP5-9P26371 169 aa9.04□□□□□ -0.96
SH3GL3-202ENST00000427482 MT1MQ8N339 61 aa9.02□□□□□ -0.97
SH3GL3-202ENST00000427482 KRTAP9-6A0A140TA67 174 aa9.01□□□□□ -0.97
SH3GL3-202ENST00000427482 KRTAP9-6A8MVA2 160 aa8.99□□□□□ -0.97
SH3GL3-202ENST00000427482 LCE5AQ5TCM9 118 aa8.98□□□□□ -0.97
SH3GL3-202ENST00000427482 SYNE2Q8WXH0 6885 aaKnown RBP8.95□□□□□ -0.98
SH3GL3-202ENST00000427482 KRTAP4-3Q9BYR4 195 aa8.89□□□□□ -0.99
SH3GL3-202ENST00000427482 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.88□□□□□ -0.99
SH3GL3-202ENST00000427482 H3BS24 57 aa8.82□□□□□ -1
SH3GL3-202ENST00000427482 LCE1AQ5T7P2 110 aa8.79□□□□□ -1
SH3GL3-202ENST00000427482 KRTAP6-3Q3LI67 103 aa8.75□□□□□ -1.01
SH3GL3-202ENST00000427482 SPRR2EP22531 72 aa8.68□□□□□ -1.02
SH3GL3-202ENST00000427482 SPRR2BP35325 72 aa8.68□□□□□ -1.02
SH3GL3-202ENST00000427482 SPRR2AP35326 72 aa8.68□□□□□ -1.02
SH3GL3-202ENST00000427482 MDN1Q9NU22 5596 aa8.66□□□□□ -1.02
SH3GL3-202ENST00000427482 LOC100996750A0A140TA64 210 aa8.63□□□□□ -1.03
SH3GL3-202ENST00000427482 KRTAP2-3P0C7H8 128 aa8.4□□□□□ -1.07
SH3GL3-202ENST00000427482 KRTAP2-4Q9BYR9 128 aa8.4□□□□□ -1.07
SH3GL3-202ENST00000427482 KRTAP2-1Q9BYU5 128 aa8.4□□□□□ -1.07
SH3GL3-202ENST00000427482 SPRR2DP22532 72 aa8.36□□□□□ -1.07
SH3GL3-202ENST00000427482 A0A0A0MQY5 61 aa8.35□□□□□ -1.07
SH3GL3-202ENST00000427482 DSTQ03001 7570 aaKnown RBP8.34□□□□□ -1.07
SH3GL3-202ENST00000427482 KRTAP9-7A8MTY7 169 aa8.29□□□□□ -1.08
SH3GL3-202ENST00000427482 KRTAP5-5Q701N2 237 aaPredicted RBP8.11□□□□□ -1.11
SH3GL3-202ENST00000427482 NEBP20929 6669 aa8.08□□□□□ -1.12
SH3GL3-202ENST00000427482 MT1AP04731 61 aa8.01□□□□□ -1.13
SH3GL3-202ENST00000427482 LCE3BQ5TA77 95 aa8□□□□□ -1.13
SH3GL3-202ENST00000427482 KRTAP6-1Q3LI64 71 aa7.96□□□□□ -1.14
SH3GL3-202ENST00000427482 INE1O15225 51 aa7.79□□□□□ -1.16
SH3GL3-202ENST00000427482 KRTAP5-4Q6L8H1 288 aa7.62□□□□□ -1.19
SH3GL3-202ENST00000427482 SYNE1Q8NF91 8797 aaKnown RBP7.6□□□□□ -1.19
SH3GL3-202ENST00000427482 KRTAP9-4Q9BYQ2 154 aa7.59□□□□□ -1.19
SH3GL3-202ENST00000427482 KRTAP2-2Q9BYT5 123 aa7.44□□□□□ -1.22
SH3GL3-202ENST00000427482 KRTAP12-4P60329 112 aa7.43□□□□□ -1.22
SH3GL3-202ENST00000427482 KRTAP4-9Q9BYQ8 210 aa7.41□□□□□ -1.22
SH3GL3-202ENST00000427482 LCE4AQ5TA78 99 aa7.39□□□□□ -1.23
SH3GL3-202ENST00000427482 KRTAP20-1Q3LI63 56 aa7.37□□□□□ -1.23
SH3GL3-202ENST00000427482 KRTAP6-2Q3LI66 62 aa7.28□□□□□ -1.24
SH3GL3-202ENST00000427482 MT4P47944 62 aa7.25□□□□□ -1.25
SH3GL3-202ENST00000427482 KRTAP4-6Q9BYQ5 205 aa7.24□□□□□ -1.25
SH3GL3-202ENST00000427482 MT3P25713 68 aa7.22□□□□□ -1.25
SH3GL3-202ENST00000427482 LCE3DQ9BYE3 92 aa7.13□□□□□ -1.27
SH3GL3-202ENST00000427482 KRTAP20-2Q3LI61 65 aa7.12□□□□□ -1.27
SH3GL3-202ENST00000427482 LCE1DQ5T752 114 aa7.09□□□□□ -1.27
SH3GL3-202ENST00000427482 HMCN1Q96RW7 5635 aa6.97□□□□□ -1.29
SH3GL3-202ENST00000427482 KRTAP5-2Q701N4 177 aa6.97□□□□□ -1.29
SH3GL3-202ENST00000427482 LCE3EQ5T5B0 92 aa6.96□□□□□ -1.3
SH3GL3-202ENST00000427482 KRTAP5-3Q6L8H2 238 aa6.85□□□□□ -1.31
SH3GL3-202ENST00000427482 OBSCNQ5VST9 7968 aa6.58□□□□□ -1.36
SH3GL3-202ENST00000427482 LCE1EQ5T753 118 aa6.21□□□□□ -1.42
SH3GL3-202ENST00000427482 PRM1P04553 51 aa6.2□□□□□ -1.42
SH3GL3-202ENST00000427482 KRTAP4-11Q9BYQ6 195 aa6.1□□□□□ -1.43
SH3GL3-202ENST00000427482 AHNAK2Q8IVF2 5795 aa6.08□□□□□ -1.44
SH3GL3-202ENST00000427482 KRTAP5-1Q6L8H4 278 aa5.98□□□□□ -1.45
SH3GL3-202ENST00000427482 KRTAP5-10Q6L8G5 202 aa5.89□□□□□ -1.47
SH3GL3-202ENST00000427482 KRTAP5-8O75690 187 aa5.88□□□□□ -1.47
SH3GL3-202ENST00000427482 MUC5ACP98088 5654 aa5.87□□□□□ -1.47
SH3GL3-202ENST00000427482 LCE1BQ5T7P3 118 aa5.86□□□□□ -1.47
SH3GL3-202ENST00000427482 KRTAP4-2Q9BYR5 136 aa5.82□□□□□ -1.48
SH3GL3-202ENST00000427482 LCE1CQ5T751 118 aa5.8□□□□□ -1.48
SH3GL3-202ENST00000427482 KRTAP5-7Q6L8G8 165 aa5.74□□□□□ -1.49
SH3GL3-202ENST00000427482 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.46□□□□□ -1.53
SH3GL3-202ENST00000427482 GPR98Q8WXG9 6306 aa5.25□□□□□ -1.57
SH3GL3-202ENST00000427482 KRTAP9-9Q9BYP9 154 aa5.21□□□□□ -1.58
SH3GL3-202ENST00000427482 KRTAP21-2Q3LI59 83 aa5.2□□□□□ -1.58
SH3GL3-202ENST00000427482 KRTAP5-11Q6L8G4 156 aa5.1□□□□□ -1.59
SH3GL3-202ENST00000427482 MUC5BQ9HC84 5762 aaPredicted RBP4.99□□□□□ -1.61
SH3GL3-202ENST00000427482 KRTAP4-12Q9BQ66 201 aa4.91□□□□□ -1.62
SH3GL3-202ENST00000427482 KRTAP4-4Q9BYR3 166 aa4.62□□□□□ -1.67
SH3GL3-202ENST00000427482 LCE1FQ5T754 118 aa4.51□□□□□ -1.69
SH3GL3-202ENST00000427482 AHNAKQ09666 5890 aaKnown RBP4.44□□□□□ -1.7
SH3GL3-202ENST00000427482 PHGR1C9JFL3 82 aa4.38□□□□□ -1.71
SH3GL3-202ENST00000427482 MUC19Q7Z5P9 8384 aa3.85□□□□□ -1.79
SH3GL3-202ENST00000427482 KRTAP21-1Q3LI58 79 aa3.83□□□□□ -1.8
SH3GL3-202ENST00000427482 MUC16Q8WXI7 14507 aa2.83□□□□□ -1.96
Retrieved 77 of 20,778 RNA–protein pairs in 13.9 ms