RNA–Protein interactions for RNA: ENST00000427231.6

NEB-209, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 26,202 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-209ENST00000427231 LCE2DQ5TA82 110 aaPredicted RBP0.94□□□□□ -2.26
NEB-209ENST00000427231 KRTAP2-3P0C7H8 128 aa0.93□□□□□ -2.26
NEB-209ENST00000427231 KRTAP2-4Q9BYR9 128 aa0.93□□□□□ -2.26
NEB-209ENST00000427231 KRTAP2-1Q9BYU5 128 aa0.93□□□□□ -2.26
NEB-209ENST00000427231 MT2AP02795 61 aa0.93□□□□□ -2.26
NEB-209ENST00000427231 MT1AP04731 61 aa0.92□□□□□ -2.26
NEB-209ENST00000427231 SPRR2EP22531 72 aa0.91□□□□□ -2.26
NEB-209ENST00000427231 SPRR2BP35325 72 aa0.91□□□□□ -2.26
NEB-209ENST00000427231 SPRR2AP35326 72 aa0.91□□□□□ -2.26
NEB-209ENST00000427231 SPRR2FQ96RM1 72 aa0.91□□□□□ -2.26
NEB-209ENST00000427231 KRTAP4-1Q9BYQ7 146 aa0.9□□□□□ -2.26
NEB-209ENST00000427231 MT1MQ8N339 61 aa0.9□□□□□ -2.27
NEB-209ENST00000427231 KRTAP19-5Q3LI72 72 aa0.89□□□□□ -2.27
NEB-209ENST00000427231 AHNAKQ09666 5890 aaKnown RBP0.89□□□□□ -2.27
NEB-209ENST00000427231 KRTAP19-1Q8IUB9 90 aa0.89□□□□□ -2.27
NEB-209ENST00000427231 MUC5ACP98088 5654 aa0.89□□□□□ -2.27
NEB-209ENST00000427231 MT1BP07438 61 aa0.88□□□□□ -2.27
NEB-209ENST00000427231 KRTAP4-7Q9BYR0 210 aa0.88□□□□□ -2.27
NEB-209ENST00000427231 LCE3EQ5T5B0 92 aa0.88□□□□□ -2.27
NEB-209ENST00000427231 KRTAP9-8Q9BYQ0 159 aa0.87□□□□□ -2.27
NEB-209ENST00000427231 KRTAP19-2Q3LHN2 52 aa0.87□□□□□ -2.27
NEB-209ENST00000427231 KRTAP9-7A8MTY7 169 aa0.87□□□□□ -2.27
NEB-209ENST00000427231 LCE2BO14633 110 aa0.87□□□□□ -2.27
NEB-209ENST00000427231 LCE1EQ5T753 118 aa0.87□□□□□ -2.27
NEB-209ENST00000427231 KRTAP9-3Q9BYQ3 159 aa0.86□□□□□ -2.27
NEB-209ENST00000427231 LCE3DQ9BYE3 92 aa0.86□□□□□ -2.27
NEB-209ENST00000427231 KRTAP6-3Q3LI67 103 aa0.86□□□□□ -2.27
NEB-209ENST00000427231 KRTAP19-6Q3LI70 58 aa0.86□□□□□ -2.27
NEB-209ENST00000427231 OBSCNQ5VST9 7968 aa0.86□□□□□ -2.27
NEB-209ENST00000427231 KRTAP4-9Q9BYQ8 210 aa0.86□□□□□ -2.27
NEB-209ENST00000427231 SPRR2DP22532 72 aa0.86□□□□□ -2.27
NEB-209ENST00000427231 KRTAP19-3Q7Z4W3 81 aa0.86□□□□□ -2.27
NEB-209ENST00000427231 PRM1P04553 51 aa0.86□□□□□ -2.27
NEB-209ENST00000427231 LCE2AQ5TA79 106 aaPredicted RBP0.85□□□□□ -2.27
NEB-209ENST00000427231 KRTAP20-1Q3LI63 56 aa0.85□□□□□ -2.27
NEB-209ENST00000427231 LCE3BQ5TA77 95 aa0.85□□□□□ -2.27
NEB-209ENST00000427231 MT1XP80297 61 aa0.84□□□□□ -2.28
NEB-209ENST00000427231 KRTAP4-8A0A0G2JLE6 195 aa0.83□□□□□ -2.28
NEB-209ENST00000427231 KRTAP4-8Q9BYQ9 185 aa0.83□□□□□ -2.28
NEB-209ENST00000427231 LCE4AQ5TA78 99 aa0.82□□□□□ -2.28
NEB-209ENST00000427231 LOC100996750A0A140TA64 210 aa0.82□□□□□ -2.28
NEB-209ENST00000427231 LCE1FQ5T754 118 aa0.81□□□□□ -2.28
NEB-209ENST00000427231 LCE1DQ5T752 114 aa0.81□□□□□ -2.28
NEB-209ENST00000427231 KRTAP9-1A8MXZ3 250 aaPredicted RBP0.8□□□□□ -2.28
NEB-209ENST00000427231 LCE5AQ5TCM9 118 aa0.78□□□□□ -2.28
NEB-209ENST00000427231 KRTAP9-6A8MVA2 160 aa0.78□□□□□ -2.28
NEB-209ENST00000427231 KRTAP4-3Q9BYR4 195 aa0.77□□□□□ -2.29
NEB-209ENST00000427231 MT4P47944 62 aa0.76□□□□□ -2.29
NEB-209ENST00000427231 KRTAP5-9P26371 169 aa0.72□□□□□ -2.29
NEB-209ENST00000427231 KRTAP19-7Q3SYF9 63 aa0.72□□□□□ -2.29
NEB-209ENST00000427231 KRTAP6-2Q3LI66 62 aa0.71□□□□□ -2.3
NEB-209ENST00000427231 KRTAP9-9Q9BYP9 154 aa0.71□□□□□ -2.3
NEB-209ENST00000427231 KRTAP9-4Q9BYQ2 154 aa0.7□□□□□ -2.3
NEB-209ENST00000427231 LCE1BQ5T7P3 118 aa0.69□□□□□ -2.3
NEB-209ENST00000427231 KRTAP4-11Q9BYQ6 195 aa0.68□□□□□ -2.3
NEB-209ENST00000427231 KRTAP5-5Q701N2 237 aaPredicted RBP0.68□□□□□ -2.3
NEB-209ENST00000427231 LCE1CQ5T751 118 aa0.62□□□□□ -2.31
NEB-209ENST00000427231 MUC19Q7Z5P9 8384 aa0.62□□□□□ -2.31
NEB-209ENST00000427231 KRTAP6-1Q3LI64 71 aa0.61□□□□□ -2.31
NEB-209ENST00000427231 KRTAP4-4Q9BYR3 166 aa0.59□□□□□ -2.31
NEB-209ENST00000427231 KRTAP5-3Q6L8H2 238 aa0.58□□□□□ -2.32
NEB-209ENST00000427231 KRTAP5-4Q6L8H1 288 aa0.57□□□□□ -2.32
NEB-209ENST00000427231 KRTAP4-6Q9BYQ5 205 aa0.57□□□□□ -2.32
NEB-209ENST00000427231 KRTAP21-1Q3LI58 79 aa0.56□□□□□ -2.32
NEB-209ENST00000427231 KRTAP20-2Q3LI61 65 aa0.56□□□□□ -2.32
NEB-209ENST00000427231 KRTAP5-1Q6L8H4 278 aa0.56□□□□□ -2.32
NEB-209ENST00000427231 KRTAP5-6Q6L8G9 129 aaPredicted RBP0.55□□□□□ -2.32
NEB-209ENST00000427231 KRTAP5-8O75690 187 aa0.54□□□□□ -2.32
NEB-209ENST00000427231 KRTAP5-2Q701N4 177 aa0.53□□□□□ -2.32
NEB-209ENST00000427231 KRTAP4-12Q9BQ66 201 aa0.52□□□□□ -2.33
NEB-209ENST00000427231 KRTAP4-2Q9BYR5 136 aa0.52□□□□□ -2.33
NEB-209ENST00000427231 MUC16Q8WXI7 14507 aa0.52□□□□□ -2.33
NEB-209ENST00000427231 KRTAP5-11Q6L8G4 156 aa0.51□□□□□ -2.33
NEB-209ENST00000427231 KRTAP5-10Q6L8G5 202 aa0.47□□□□□ -2.33
NEB-209ENST00000427231 KRTAP5-7Q6L8G8 165 aa0.46□□□□□ -2.34
NEB-209ENST00000427231 PHGR1C9JFL3 82 aa0.44□□□□□ -2.34
NEB-209ENST00000427231 KRTAP21-2Q3LI59 83 aa0.38□□□□□ -2.35
Retrieved 77 of 20,778 RNA–protein pairs in 70.3 ms