RNA–Protein interactions for RNA: ENST00000426886.1

SMIM12-203, Transcript of small integral membrane protein 12, humanhuman

TSL 1 (best)

Gene SMIM12, Length 2,618 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM12-203ENST00000426886 SPRR2BP35325 72 aa4.82□□□□□ -1.64
SMIM12-203ENST00000426886 SPRR2AP35326 72 aa4.82□□□□□ -1.64
SMIM12-203ENST00000426886 SPRR5A0A1B0GTR4 108 aa4.78□□□□□ -1.64
SMIM12-203ENST00000426886 LCE1AQ5T7P2 110 aa4.76□□□□□ -1.65
SMIM12-203ENST00000426886 TNP1P09430 55 aa4.73□□□□□ -1.65
SMIM12-203ENST00000426886 KRTAP19-7Q3SYF9 63 aa4.69□□□□□ -1.66
SMIM12-203ENST00000426886 GPR98Q8WXG9 6306 aa4.68□□□□□ -1.66
SMIM12-203ENST00000426886 KRTAP20-1Q3LI63 56 aa4.68□□□□□ -1.66
SMIM12-203ENST00000426886 LCE3AQ5TA76 89 aa4.66□□□□□ -1.66
SMIM12-203ENST00000426886 KRTAP19-5Q3LI72 72 aa4.65□□□□□ -1.66
SMIM12-203ENST00000426886 SPRR2DP22532 72 aa4.65□□□□□ -1.67
SMIM12-203ENST00000426886 KRTAP23-1A1A580 65 aa4.64□□□□□ -1.67
SMIM12-203ENST00000426886 MT1EP04732 61 aa4.63□□□□□ -1.67
SMIM12-203ENST00000426886 DSTQ03001 7570 aaKnown RBP4.6□□□□□ -1.67
SMIM12-203ENST00000426886 KRTAP2-3P0C7H8 128 aa4.6□□□□□ -1.67
SMIM12-203ENST00000426886 KRTAP2-4Q9BYR9 128 aa4.6□□□□□ -1.67
SMIM12-203ENST00000426886 INE1O15225 51 aa4.57□□□□□ -1.68
SMIM12-203ENST00000426886 KRTAP19-3Q7Z4W3 81 aa4.55□□□□□ -1.68
SMIM12-203ENST00000426886 LCE5AQ5TCM9 118 aa4.53□□□□□ -1.68
SMIM12-203ENST00000426886 LCE3BQ5TA77 95 aa4.5□□□□□ -1.69
SMIM12-203ENST00000426886 KRTAP2-2Q9BYT5 123 aa4.47□□□□□ -1.69
SMIM12-203ENST00000426886 KRTAP2-1Q9BYU5 128 aa4.47□□□□□ -1.69
SMIM12-203ENST00000426886 MT1LQ93083 61 aa4.47□□□□□ -1.69
SMIM12-203ENST00000426886 KRTAP12-3P60328 96 aa4.46□□□□□ -1.69
SMIM12-203ENST00000426886 MT1GP13640 62 aa4.45□□□□□ -1.7
SMIM12-203ENST00000426886 MT1MQ8N339 61 aa4.4□□□□□ -1.71
SMIM12-203ENST00000426886 KRTAP4-3Q9BYR4 195 aa4.37□□□□□ -1.71
SMIM12-203ENST00000426886 KRTAP4-7Q9BYR0 210 aa4.34□□□□□ -1.71
SMIM12-203ENST00000426886 KRTAP4-9Q9BYQ8 210 aa4.2□□□□□ -1.74
SMIM12-203ENST00000426886 LCE3CQ5T5A8 94 aa4.12□□□□□ -1.75
SMIM12-203ENST00000426886 LOC100996750A0A140TA64 210 aa4.1□□□□□ -1.75
SMIM12-203ENST00000426886 MT4P47944 62 aa4.1□□□□□ -1.75
SMIM12-203ENST00000426886 KRTAP19-4Q3LI73 84 aa4.08□□□□□ -1.76
SMIM12-203ENST00000426886 LCE1DQ5T752 114 aa4.07□□□□□ -1.76
SMIM12-203ENST00000426886 LCE4AQ5TA78 99 aa4.07□□□□□ -1.76
SMIM12-203ENST00000426886 HMCN1Q96RW7 5635 aa4.06□□□□□ -1.76
SMIM12-203ENST00000426886 KRTAP5-4Q6L8H1 288 aa4.02□□□□□ -1.77
SMIM12-203ENST00000426886 KRTAP4-6Q9BYQ5 205 aa3.99□□□□□ -1.77
SMIM12-203ENST00000426886 KRTAP5-5Q701N2 237 aaPredicted RBP3.98□□□□□ -1.77
SMIM12-203ENST00000426886 SYNE1Q8NF91 8797 aaKnown RBP3.94□□□□□ -1.78
SMIM12-203ENST00000426886 KRTAP9-6A8MVA2 160 aa3.91□□□□□ -1.78
SMIM12-203ENST00000426886 KRTAP12-4P60329 112 aa3.86□□□□□ -1.79
SMIM12-203ENST00000426886 KRTAP20-2Q3LI61 65 aa3.82□□□□□ -1.8
SMIM12-203ENST00000426886 AHNAK2Q8IVF2 5795 aa3.79□□□□□ -1.8
SMIM12-203ENST00000426886 KRTAP6-1Q3LI64 71 aa3.79□□□□□ -1.8
SMIM12-203ENST00000426886 MUC5BQ9HC84 5762 aaPredicted RBP3.79□□□□□ -1.8
SMIM12-203ENST00000426886 MT1AP04731 61 aa3.77□□□□□ -1.81
SMIM12-203ENST00000426886 AHNAKQ09666 5890 aaKnown RBP3.72□□□□□ -1.81
SMIM12-203ENST00000426886 KRTAP5-3Q6L8H2 238 aa3.68□□□□□ -1.82
SMIM12-203ENST00000426886 KRTAP9-4Q9BYQ2 154 aa3.64□□□□□ -1.83
SMIM12-203ENST00000426886 KRTAP5-10Q6L8G5 202 aa3.63□□□□□ -1.83
SMIM12-203ENST00000426886 OBSCNQ5VST9 7968 aa3.62□□□□□ -1.83
SMIM12-203ENST00000426886 KRTAP6-2Q3LI66 62 aa3.59□□□□□ -1.83
SMIM12-203ENST00000426886 KRTAP5-2Q701N4 177 aa3.56□□□□□ -1.84
SMIM12-203ENST00000426886 MT3P25713 68 aa3.46□□□□□ -1.86
SMIM12-203ENST00000426886 KRTAP4-11Q9BYQ6 195 aa3.45□□□□□ -1.86
SMIM12-203ENST00000426886 KRTAP5-7Q6L8G8 165 aa3.43□□□□□ -1.86
SMIM12-203ENST00000426886 KRTAP5-8O75690 187 aa3.32□□□□□ -1.88
SMIM12-203ENST00000426886 KRTAP5-1Q6L8H4 278 aa3.18□□□□□ -1.9
SMIM12-203ENST00000426886 MUC5ACP98088 5654 aa3.16□□□□□ -1.9
SMIM12-203ENST00000426886 LCE1EQ5T753 118 aa3.15□□□□□ -1.9
SMIM12-203ENST00000426886 PRM1P04553 51 aa3.11□□□□□ -1.91
SMIM12-203ENST00000426886 KRTAP9-9Q9BYP9 154 aa3.11□□□□□ -1.91
SMIM12-203ENST00000426886 LCE3EQ5T5B0 92 aa3.04□□□□□ -1.92
SMIM12-203ENST00000426886 LCE3DQ9BYE3 92 aa3.04□□□□□ -1.92
SMIM12-203ENST00000426886 LCE1FQ5T754 118 aa3.01□□□□□ -1.93
SMIM12-203ENST00000426886 LCE1BQ5T7P3 118 aa3□□□□□ -1.93
SMIM12-203ENST00000426886 KRTAP4-2Q9BYR5 136 aa2.93□□□□□ -1.94
SMIM12-203ENST00000426886 LCE1CQ5T751 118 aa2.88□□□□□ -1.95
SMIM12-203ENST00000426886 KRTAP4-12Q9BQ66 201 aa2.67□□□□□ -1.98
SMIM12-203ENST00000426886 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.61□□□□□ -1.99
SMIM12-203ENST00000426886 KRTAP5-11Q6L8G4 156 aa2.57□□□□□ -2
SMIM12-203ENST00000426886 KRTAP4-4Q9BYR3 166 aa2.55□□□□□ -2
SMIM12-203ENST00000426886 KRTAP21-2Q3LI59 83 aa2.47□□□□□ -2.01
SMIM12-203ENST00000426886 PHGR1C9JFL3 82 aa2.23□□□□□ -2.05
SMIM12-203ENST00000426886 MUC19Q7Z5P9 8384 aa2.2□□□□□ -2.06
SMIM12-203ENST00000426886 KRTAP21-1Q3LI58 79 aa2.03□□□□□ -2.08
SMIM12-203ENST00000426886 MUC16Q8WXI7 14507 aa1.44□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 124.1 ms