RNA–Protein interactions for RNA: ENST00000425208.6

HMGA2-205, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best) BASIC

Gene HMGA2, Length 1,444 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-205ENST00000425208 KRTAP19-3Q7Z4W3 81 aa7.96□□□□□ -1.13
HMGA2-205ENST00000425208 LCE5AQ5TCM9 118 aa7.91□□□□□ -1.14
HMGA2-205ENST00000425208 KRTAP12-3P60328 96 aa7.87□□□□□ -1.15
HMGA2-205ENST00000425208 KRTAP23-1A1A580 65 aa7.86□□□□□ -1.15
HMGA2-205ENST00000425208 BRK1Q8WUW1 75 aa7.85□□□□□ -1.15
HMGA2-205ENST00000425208 MT1LQ93083 61 aa7.84□□□□□ -1.15
HMGA2-205ENST00000425208 MT1GP13640 62 aa7.82□□□□□ -1.16
HMGA2-205ENST00000425208 PP632Q6XCG6 107 aa7.78□□□□□ -1.16
HMGA2-205ENST00000425208 LCE3BQ5TA77 95 aa7.77□□□□□ -1.17
HMGA2-205ENST00000425208 KRTAP2-2Q9BYT5 123 aa7.76□□□□□ -1.17
HMGA2-205ENST00000425208 KRTAP2-1Q9BYU5 128 aa7.76□□□□□ -1.17
HMGA2-205ENST00000425208 MT1MQ8N339 61 aa7.69□□□□□ -1.18
HMGA2-205ENST00000425208 DSTQ03001 7570 aaKnown RBP7.64□□□□□ -1.19
HMGA2-205ENST00000425208 KRTAP15-1Q3LI76 137 aa7.51□□□□□ -1.21
HMGA2-205ENST00000425208 KRTAP4-3Q9BYR4 195 aa7.48□□□□□ -1.21
HMGA2-205ENST00000425208 PRO0628Q9UI54 55 aa7.46□□□□□ -1.21
HMGA2-205ENST00000425208 KRTAP19-4Q3LI73 84 aa7.45□□□□□ -1.22
HMGA2-205ENST00000425208 KRTAP4-7Q9BYR0 210 aa7.45□□□□□ -1.22
HMGA2-205ENST00000425208 PMAIP1Q13794 54 aa7.39□□□□□ -1.23
HMGA2-205ENST00000425208 LCE3CQ5T5A8 94 aa7.29□□□□□ -1.24
HMGA2-205ENST00000425208 KRTAP4-9Q9BYQ8 210 aa7.15□□□□□ -1.27
HMGA2-205ENST00000425208 LCE4AQ5TA78 99 aa7.12□□□□□ -1.27
HMGA2-205ENST00000425208 KRTAP5-4Q6L8H1 288 aa7.06□□□□□ -1.28
HMGA2-205ENST00000425208 LOC100996750A0A140TA64 210 aa7.04□□□□□ -1.28
HMGA2-205ENST00000425208 KRTAP5-5Q701N2 237 aaPredicted RBP7.01□□□□□ -1.29
HMGA2-205ENST00000425208 PRAC1Q96KF2 57 aa7□□□□□ -1.29
HMGA2-205ENST00000425208 LCE1DQ5T752 114 aa6.99□□□□□ -1.29
HMGA2-205ENST00000425208 MT4P47944 62 aa6.98□□□□□ -1.29
HMGA2-205ENST00000425208 GPR98Q8WXG9 6306 aa6.97□□□□□ -1.29
HMGA2-205ENST00000425208 H3BS24 57 aa6.89□□□□□ -1.31
HMGA2-205ENST00000425208 HMCN1Q96RW7 5635 aa6.88□□□□□ -1.31
HMGA2-205ENST00000425208 KTN1-AS1Q86SY8 53 aa6.84□□□□□ -1.31
HMGA2-205ENST00000425208 KRTAP9-6A8MVA2 160 aa6.84□□□□□ -1.32
HMGA2-205ENST00000425208 KRTAP4-6Q9BYQ5 205 aa6.82□□□□□ -1.32
HMGA2-205ENST00000425208 KRTAP12-4P60329 112 aa6.74□□□□□ -1.33
HMGA2-205ENST00000425208 A0A0A0MQY5 61 aa6.72□□□□□ -1.33
HMGA2-205ENST00000425208 MT1AP04731 61 aa6.67□□□□□ -1.34
HMGA2-205ENST00000425208 SPRR5A0A1B0GTR4 108 aa6.67□□□□□ -1.34
HMGA2-205ENST00000425208 SYNE1Q8NF91 8797 aaKnown RBP6.66□□□□□ -1.34
HMGA2-205ENST00000425208 KRTAP20-2Q3LI61 65 aa6.64□□□□□ -1.35
HMGA2-205ENST00000425208 AHNAK2Q8IVF2 5795 aa6.63□□□□□ -1.35
HMGA2-205ENST00000425208 KRTAP6-1Q3LI64 71 aa6.59□□□□□ -1.35
HMGA2-205ENST00000425208 KRTAP5-10Q6L8G5 202 aa6.45□□□□□ -1.38
HMGA2-205ENST00000425208 KRTAP5-3Q6L8H2 238 aa6.42□□□□□ -1.38
HMGA2-205ENST00000425208 KRTAP9-4Q9BYQ2 154 aa6.39□□□□□ -1.39
HMGA2-205ENST00000425208 KRTAP5-2Q701N4 177 aa6.26□□□□□ -1.41
HMGA2-205ENST00000425208 KRTAP6-2Q3LI66 62 aa6.23□□□□□ -1.41
HMGA2-205ENST00000425208 KRTAP5-7Q6L8G8 165 aa6.19□□□□□ -1.42
HMGA2-205ENST00000425208 MT3P25713 68 aa6.09□□□□□ -1.43
HMGA2-205ENST00000425208 KRTAP4-11Q9BYQ6 195 aa5.95□□□□□ -1.46
HMGA2-205ENST00000425208 LUZP6Q538Z0 58 aa5.89□□□□□ -1.47
HMGA2-205ENST00000425208 OBSCNQ5VST9 7968 aa5.82□□□□□ -1.48
HMGA2-205ENST00000425208 KRTAP5-8O75690 187 aa5.74□□□□□ -1.49
HMGA2-205ENST00000425208 KRTAP5-1Q6L8H4 278 aa5.53□□□□□ -1.52
HMGA2-205ENST00000425208 LCE1EQ5T753 118 aa5.48□□□□□ -1.53
HMGA2-205ENST00000425208 MUC5ACP98088 5654 aa5.46□□□□□ -1.54
HMGA2-205ENST00000425208 AHNAKQ09666 5890 aaKnown RBP5.44□□□□□ -1.54
HMGA2-205ENST00000425208 MUC5BQ9HC84 5762 aaPredicted RBP5.43□□□□□ -1.54
HMGA2-205ENST00000425208 NDUFAF8A1L188 74 aa5.39□□□□□ -1.55
HMGA2-205ENST00000425208 KRTAP9-9Q9BYP9 154 aa5.37□□□□□ -1.55
HMGA2-205ENST00000425208 LCE3DQ9BYE3 92 aa5.35□□□□□ -1.55
HMGA2-205ENST00000425208 LCE1BQ5T7P3 118 aa5.13□□□□□ -1.59
HMGA2-205ENST00000425208 KRTAP4-2Q9BYR5 136 aa5.12□□□□□ -1.59
HMGA2-205ENST00000425208 LCE3EQ5T5B0 92 aa5.11□□□□□ -1.59
HMGA2-205ENST00000425208 LCE1CQ5T751 118 aa5.08□□□□□ -1.6
HMGA2-205ENST00000425208 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.69□□□□□ -1.66
HMGA2-205ENST00000425208 KRTAP5-11Q6L8G4 156 aa4.57□□□□□ -1.68
HMGA2-205ENST00000425208 INE1O15225 51 aa4.54□□□□□ -1.68
HMGA2-205ENST00000425208 KRTAP4-12Q9BQ66 201 aa4.46□□□□□ -1.69
HMGA2-205ENST00000425208 KRTAP21-2Q3LI59 83 aa4.34□□□□□ -1.71
HMGA2-205ENST00000425208 LCE1FQ5T754 118 aa4.33□□□□□ -1.72
HMGA2-205ENST00000425208 PRM1P04553 51 aa4.1□□□□□ -1.75
HMGA2-205ENST00000425208 PHGR1C9JFL3 82 aa3.93□□□□□ -1.78
HMGA2-205ENST00000425208 KRTAP4-4Q9BYR3 166 aa3.9□□□□□ -1.78
HMGA2-205ENST00000425208 MUC19Q7Z5P9 8384 aa3.55□□□□□ -1.84
HMGA2-205ENST00000425208 KRTAP21-1Q3LI58 79 aa2.83□□□□□ -1.96
HMGA2-205ENST00000425208 MUC16Q8WXI7 14507 aa2.49□□□□□ -2.01
Retrieved 77 of 20,778 RNA–protein pairs in 11.7 ms