RNA–Protein interactions for RNA: ENST00000424932.2

CKS1BP6-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 6, humanhuman

BASIC

Gene CKS1BP6, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP6-201ENST00000424932 MT1EP04732 61 aa1.71□□□□□ -2.14
CKS1BP6-201ENST00000424932 INE1O15225 51 aa1.7□□□□□ -2.14
CKS1BP6-201ENST00000424932 MT1LQ93083 61 aa1.7□□□□□ -2.14
CKS1BP6-201ENST00000424932 KRTAP9-6A8MVA2 160 aa1.68□□□□□ -2.14
CKS1BP6-201ENST00000424932 SYNE2Q8WXH0 6885 aaKnown RBP1.66□□□□□ -2.14
CKS1BP6-201ENST00000424932 KRTAP2-3P0C7H8 128 aa1.65□□□□□ -2.15
CKS1BP6-201ENST00000424932 KRTAP2-4Q9BYR9 128 aa1.65□□□□□ -2.15
CKS1BP6-201ENST00000424932 KRTAP2-1Q9BYU5 128 aa1.65□□□□□ -2.15
CKS1BP6-201ENST00000424932 KRTAP4-7Q9BYR0 210 aa1.63□□□□□ -2.15
CKS1BP6-201ENST00000424932 KMT2DO14686 5537 aa1.62□□□□□ -2.15
CKS1BP6-201ENST00000424932 MT1GP13640 62 aa1.62□□□□□ -2.15
CKS1BP6-201ENST00000424932 KRTAP19-3Q7Z4W3 81 aa1.61□□□□□ -2.15
CKS1BP6-201ENST00000424932 MT1MQ8N339 61 aa1.6□□□□□ -2.15
CKS1BP6-201ENST00000424932 MACF1Q9UPN3 7388 aaKnown RBP1.58□□□□□ -2.16
CKS1BP6-201ENST00000424932 KRTAP6-3Q3LI67 103 aa1.57□□□□□ -2.16
CKS1BP6-201ENST00000424932 LCE5AQ5TCM9 118 aa1.57□□□□□ -2.16
CKS1BP6-201ENST00000424932 FCGBPQ9Y6R7 5405 aaPredicted RBP1.55□□□□□ -2.16
CKS1BP6-201ENST00000424932 KRTAP4-3Q9BYR4 195 aa1.54□□□□□ -2.16
CKS1BP6-201ENST00000424932 SPRR2FQ96RM1 72 aa1.53□□□□□ -2.16
CKS1BP6-201ENST00000424932 LOC100996750A0A140TA64 210 aa1.52□□□□□ -2.17
CKS1BP6-201ENST00000424932 KRTAP5-9P26371 169 aa1.52□□□□□ -2.17
CKS1BP6-201ENST00000424932 AHNAK2Q8IVF2 5795 aa1.5□□□□□ -2.17
CKS1BP6-201ENST00000424932 LCE1AQ5T7P2 110 aa1.47□□□□□ -2.17
CKS1BP6-201ENST00000424932 MT1AP04731 61 aa1.46□□□□□ -2.18
CKS1BP6-201ENST00000424932 MUC12Q9UKN1 5478 aa1.46□□□□□ -2.18
CKS1BP6-201ENST00000424932 KRTAP5-5Q701N2 237 aaPredicted RBP1.45□□□□□ -2.18
CKS1BP6-201ENST00000424932 KRTAP2-2Q9BYT5 123 aa1.45□□□□□ -2.18
CKS1BP6-201ENST00000424932 KRTAP6-1Q3LI64 71 aa1.42□□□□□ -2.18
CKS1BP6-201ENST00000424932 KRTAP5-7Q6L8G8 165 aa1.42□□□□□ -2.18
CKS1BP6-201ENST00000424932 SPRR2EP22531 72 aa1.41□□□□□ -2.18
CKS1BP6-201ENST00000424932 SPRR2BP35325 72 aa1.41□□□□□ -2.18
CKS1BP6-201ENST00000424932 SPRR2AP35326 72 aa1.41□□□□□ -2.18
CKS1BP6-201ENST00000424932 LCE3BQ5TA77 95 aa1.41□□□□□ -2.18
CKS1BP6-201ENST00000424932 KRTAP12-4P60329 112 aa1.39□□□□□ -2.19
CKS1BP6-201ENST00000424932 KRTAP5-10Q6L8G5 202 aa1.39□□□□□ -2.19
CKS1BP6-201ENST00000424932 AHNAKQ09666 5890 aaKnown RBP1.36□□□□□ -2.19
CKS1BP6-201ENST00000424932 SPRR2DP22532 72 aa1.36□□□□□ -2.19
CKS1BP6-201ENST00000424932 KRTAP9-4Q9BYQ2 154 aa1.35□□□□□ -2.19
CKS1BP6-201ENST00000424932 LCE3DQ9BYE3 92 aa1.34□□□□□ -2.19
CKS1BP6-201ENST00000424932 KRTAP4-9Q9BYQ8 210 aa1.34□□□□□ -2.19
CKS1BP6-201ENST00000424932 LCE3EQ5T5B0 92 aa1.33□□□□□ -2.2
CKS1BP6-201ENST00000424932 KRTAP5-4Q6L8H1 288 aa1.32□□□□□ -2.2
CKS1BP6-201ENST00000424932 DSTQ03001 7570 aaKnown RBP1.32□□□□□ -2.2
CKS1BP6-201ENST00000424932 MDN1Q9NU22 5596 aa1.32□□□□□ -2.2
CKS1BP6-201ENST00000424932 SYNE1Q8NF91 8797 aaKnown RBP1.31□□□□□ -2.2
CKS1BP6-201ENST00000424932 MUC5BQ9HC84 5762 aaPredicted RBP1.3□□□□□ -2.2
CKS1BP6-201ENST00000424932 MT3P25713 68 aa1.29□□□□□ -2.2
CKS1BP6-201ENST00000424932 KRTAP6-2Q3LI66 62 aa1.27□□□□□ -2.21
CKS1BP6-201ENST00000424932 LCE4AQ5TA78 99 aa1.24□□□□□ -2.21
CKS1BP6-201ENST00000424932 MUC5ACP98088 5654 aa1.23□□□□□ -2.21
CKS1BP6-201ENST00000424932 PRM1P04553 51 aa1.23□□□□□ -2.21
CKS1BP6-201ENST00000424932 KRTAP5-2Q701N4 177 aa1.23□□□□□ -2.21
CKS1BP6-201ENST00000424932 HMCN1Q96RW7 5635 aa1.23□□□□□ -2.21
CKS1BP6-201ENST00000424932 KRTAP5-3Q6L8H2 238 aa1.21□□□□□ -2.22
CKS1BP6-201ENST00000424932 KRTAP20-2Q3LI61 65 aa1.2□□□□□ -2.22
CKS1BP6-201ENST00000424932 KRTAP4-2Q9BYR5 136 aa1.19□□□□□ -2.22
CKS1BP6-201ENST00000424932 KRTAP4-6Q9BYQ5 205 aa1.18□□□□□ -2.22
CKS1BP6-201ENST00000424932 OBSCNQ5VST9 7968 aa1.18□□□□□ -2.22
CKS1BP6-201ENST00000424932 MT4P47944 62 aa1.16□□□□□ -2.22
CKS1BP6-201ENST00000424932 LCE1DQ5T752 114 aa1.16□□□□□ -2.22
CKS1BP6-201ENST00000424932 LCE1EQ5T753 118 aa1.11□□□□□ -2.23
CKS1BP6-201ENST00000424932 KRTAP9-9Q9BYP9 154 aa1.05□□□□□ -2.24
CKS1BP6-201ENST00000424932 KRTAP5-1Q6L8H4 278 aa1.04□□□□□ -2.24
CKS1BP6-201ENST00000424932 LCE1CQ5T751 118 aa1.03□□□□□ -2.24
CKS1BP6-201ENST00000424932 LCE1BQ5T7P3 118 aa1.03□□□□□ -2.24
CKS1BP6-201ENST00000424932 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.01□□□□□ -2.25
CKS1BP6-201ENST00000424932 KRTAP5-8O75690 187 aa0.99□□□□□ -2.25
CKS1BP6-201ENST00000424932 KRTAP4-11Q9BYQ6 195 aa0.99□□□□□ -2.25
CKS1BP6-201ENST00000424932 KRTAP21-2Q3LI59 83 aa0.94□□□□□ -2.26
CKS1BP6-201ENST00000424932 KRTAP5-11Q6L8G4 156 aa0.91□□□□□ -2.26
CKS1BP6-201ENST00000424932 PHGR1C9JFL3 82 aa0.86□□□□□ -2.27
CKS1BP6-201ENST00000424932 KRTAP21-1Q3LI58 79 aa0.8□□□□□ -2.28
CKS1BP6-201ENST00000424932 LCE1FQ5T754 118 aa0.78□□□□□ -2.28
CKS1BP6-201ENST00000424932 KRTAP4-4Q9BYR3 166 aa0.77□□□□□ -2.29
CKS1BP6-201ENST00000424932 KRTAP4-12Q9BQ66 201 aa0.75□□□□□ -2.29
CKS1BP6-201ENST00000424932 MUC19Q7Z5P9 8384 aa0.68□□□□□ -2.3
CKS1BP6-201ENST00000424932 MUC16Q8WXI7 14507 aa0.55□□□□□ -2.32
Retrieved 77 of 20,778 RNA–protein pairs in 72.4 ms