RNA–Protein interactions for RNA: ENST00000423335.2

SHISA9-201, Transcript of shisa family member 9, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHISA9, Length 4,043 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA9-201ENST00000423335 SYNE2Q8WXH0 6885 aaKnown RBP5.2□□□□□ -1.58
SHISA9-201ENST00000423335 MT1GP13640 62 aa5.2□□□□□ -1.58
SHISA9-201ENST00000423335 KRTAP19-6Q3LI70 58 aa5.15□□□□□ -1.59
SHISA9-201ENST00000423335 SSPOA2VEC9 5147 aa5.07□□□□□ -1.6
SHISA9-201ENST00000423335 MUC12Q9UKN1 5478 aa5.07□□□□□ -1.6
SHISA9-201ENST00000423335 SPRR2DP22532 72 aa5.06□□□□□ -1.6
SHISA9-201ENST00000423335 MT1EP04732 61 aa5.05□□□□□ -1.6
SHISA9-201ENST00000423335 KRTAP4-3Q9BYR4 195 aa5.04□□□□□ -1.6
SHISA9-201ENST00000423335 KRTAP12-4P60329 112 aa5.03□□□□□ -1.6
SHISA9-201ENST00000423335 LCE3BQ5TA77 95 aa5.03□□□□□ -1.6
SHISA9-201ENST00000423335 MT1LQ93083 61 aa5.02□□□□□ -1.61
SHISA9-201ENST00000423335 LCE2DQ5TA82 110 aaPredicted RBP5.01□□□□□ -1.61
SHISA9-201ENST00000423335 KRTAP19-3Q7Z4W3 81 aa5□□□□□ -1.61
SHISA9-201ENST00000423335 MACF1Q9UPN3 7388 aaKnown RBP4.99□□□□□ -1.61
SHISA9-201ENST00000423335 KRTAP19-7Q3SYF9 63 aa4.96□□□□□ -1.62
SHISA9-201ENST00000423335 KRTAP9-6A0A140TA67 174 aa4.95□□□□□ -1.62
SHISA9-201ENST00000423335 LOC100996750A0A140TA64 210 aa4.92□□□□□ -1.62
SHISA9-201ENST00000423335 KRTAP19-4Q3LI73 84 aa4.92□□□□□ -1.62
SHISA9-201ENST00000423335 KRTAP9-6A8MVA2 160 aa4.86□□□□□ -1.63
SHISA9-201ENST00000423335 MT1MQ8N339 61 aa4.85□□□□□ -1.63
SHISA9-201ENST00000423335 KRTAP9-7A8MTY7 169 aa4.69□□□□□ -1.66
SHISA9-201ENST00000423335 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.68□□□□□ -1.66
SHISA9-201ENST00000423335 MT4P47944 62 aa4.67□□□□□ -1.66
SHISA9-201ENST00000423335 LCE3DQ9BYE3 92 aa4.67□□□□□ -1.66
SHISA9-201ENST00000423335 KRTAP2-3P0C7H8 128 aa4.65□□□□□ -1.66
SHISA9-201ENST00000423335 KRTAP2-4Q9BYR9 128 aa4.65□□□□□ -1.66
SHISA9-201ENST00000423335 KRTAP2-1Q9BYU5 128 aa4.65□□□□□ -1.66
SHISA9-201ENST00000423335 KRTAP4-9Q9BYQ8 210 aa4.62□□□□□ -1.67
SHISA9-201ENST00000423335 MDN1Q9NU22 5596 aa4.6□□□□□ -1.67
SHISA9-201ENST00000423335 LCE3EQ5T5B0 92 aa4.58□□□□□ -1.68
SHISA9-201ENST00000423335 LCE1AQ5T7P2 110 aa4.55□□□□□ -1.68
SHISA9-201ENST00000423335 KRTAP6-3Q3LI67 103 aa4.48□□□□□ -1.69
SHISA9-201ENST00000423335 LCE5AQ5TCM9 118 aa4.48□□□□□ -1.69
SHISA9-201ENST00000423335 PRM1P04553 51 aa4.42□□□□□ -1.7
SHISA9-201ENST00000423335 KRTAP6-1Q3LI64 71 aa4.33□□□□□ -1.72
SHISA9-201ENST00000423335 MT1AP04731 61 aa4.3□□□□□ -1.72
SHISA9-201ENST00000423335 MT3P25713 68 aa4.29□□□□□ -1.72
SHISA9-201ENST00000423335 KRTAP20-1Q3LI63 56 aa4.29□□□□□ -1.72
SHISA9-201ENST00000423335 NEBP20929 6669 aa4.26□□□□□ -1.73
SHISA9-201ENST00000423335 LCE1DQ5T752 114 aa4.19□□□□□ -1.74
SHISA9-201ENST00000423335 KRTAP6-2Q3LI66 62 aa4.17□□□□□ -1.74
SHISA9-201ENST00000423335 LCE1BQ5T7P3 118 aa4.16□□□□□ -1.74
SHISA9-201ENST00000423335 KRTAP5-9P26371 169 aa4.15□□□□□ -1.74
SHISA9-201ENST00000423335 KRTAP2-2Q9BYT5 123 aa4.12□□□□□ -1.75
SHISA9-201ENST00000423335 MUC19Q7Z5P9 8384 aa4.05□□□□□ -1.76
SHISA9-201ENST00000423335 KRTAP9-4Q9BYQ2 154 aa4□□□□□ -1.77
SHISA9-201ENST00000423335 KRTAP4-6Q9BYQ5 205 aa3.96□□□□□ -1.78
SHISA9-201ENST00000423335 LCE4AQ5TA78 99 aa3.92□□□□□ -1.78
SHISA9-201ENST00000423335 GPR98Q8WXG9 6306 aa3.85□□□□□ -1.79
SHISA9-201ENST00000423335 MUC5ACP98088 5654 aa3.68□□□□□ -1.82
SHISA9-201ENST00000423335 KRTAP20-2Q3LI61 65 aa3.68□□□□□ -1.82
SHISA9-201ENST00000423335 KRTAP5-5Q701N2 237 aaPredicted RBP3.62□□□□□ -1.83
SHISA9-201ENST00000423335 LCE1EQ5T753 118 aa3.56□□□□□ -1.84
SHISA9-201ENST00000423335 HMCN1Q96RW7 5635 aa3.56□□□□□ -1.84
SHISA9-201ENST00000423335 KRTAP4-11Q9BYQ6 195 aa3.37□□□□□ -1.87
SHISA9-201ENST00000423335 LCE1CQ5T751 118 aa3.32□□□□□ -1.88
SHISA9-201ENST00000423335 LCE1FQ5T754 118 aa3.32□□□□□ -1.88
SHISA9-201ENST00000423335 KRTAP5-4Q6L8H1 288 aa3.32□□□□□ -1.88
SHISA9-201ENST00000423335 KRTAP9-9Q9BYP9 154 aa3.29□□□□□ -1.88
SHISA9-201ENST00000423335 AHNAK2Q8IVF2 5795 aa3.26□□□□□ -1.89
SHISA9-201ENST00000423335 KRTAP4-12Q9BQ66 201 aa3.23□□□□□ -1.89
SHISA9-201ENST00000423335 KRTAP4-2Q9BYR5 136 aa3.23□□□□□ -1.89
SHISA9-201ENST00000423335 KRTAP5-3Q6L8H2 238 aa3.2□□□□□ -1.9
SHISA9-201ENST00000423335 KRTAP4-4Q9BYR3 166 aa3.17□□□□□ -1.9
SHISA9-201ENST00000423335 MUC5BQ9HC84 5762 aaPredicted RBP2.98□□□□□ -1.93
SHISA9-201ENST00000423335 KRTAP5-8O75690 187 aa2.97□□□□□ -1.93
SHISA9-201ENST00000423335 KRTAP5-2Q701N4 177 aa2.92□□□□□ -1.94
SHISA9-201ENST00000423335 AHNAKQ09666 5890 aaKnown RBP2.78□□□□□ -1.96
SHISA9-201ENST00000423335 KRTAP5-10Q6L8G5 202 aa2.76□□□□□ -1.97
SHISA9-201ENST00000423335 KRTAP5-1Q6L8H4 278 aa2.69□□□□□ -1.98
SHISA9-201ENST00000423335 KRTAP21-2Q3LI59 83 aa2.41□□□□□ -2.02
SHISA9-201ENST00000423335 KRTAP5-11Q6L8G4 156 aa2.37□□□□□ -2.03
SHISA9-201ENST00000423335 PHGR1C9JFL3 82 aa2.24□□□□□ -2.05
SHISA9-201ENST00000423335 KRTAP5-7Q6L8G8 165 aa2.24□□□□□ -2.05
SHISA9-201ENST00000423335 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.18□□□□□ -2.06
SHISA9-201ENST00000423335 KRTAP21-1Q3LI58 79 aa2.15□□□□□ -2.06
SHISA9-201ENST00000423335 MUC16Q8WXI7 14507 aa1.49□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 139.3 ms