RNA–Protein interactions for RNA: ENST00000422760.1

LSM8-203, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

TSL 1 (best) BASIC

Gene LSM8, Length 1,920 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-203ENST00000422760 KRTAP4-7Q9BYR0 210 aa7.96□□□□□ -1.13
LSM8-203ENST00000422760 MUC12Q9UKN1 5478 aa7.94□□□□□ -1.14
LSM8-203ENST00000422760 KRTAP9-6A8MVA2 160 aa7.89□□□□□ -1.15
LSM8-203ENST00000422760 SPRR2FQ96RM1 72 aa7.86□□□□□ -1.15
LSM8-203ENST00000422760 KRTAP19-3Q7Z4W3 81 aa7.84□□□□□ -1.16
LSM8-203ENST00000422760 KRTAP2-3P0C7H8 128 aa7.81□□□□□ -1.16
LSM8-203ENST00000422760 KRTAP2-4Q9BYR9 128 aa7.81□□□□□ -1.16
LSM8-203ENST00000422760 KRTAP2-1Q9BYU5 128 aa7.81□□□□□ -1.16
LSM8-203ENST00000422760 MT1GP13640 62 aa7.76□□□□□ -1.17
LSM8-203ENST00000422760 SYNE2Q8WXH0 6885 aaKnown RBP7.74□□□□□ -1.17
LSM8-203ENST00000422760 MT1MQ8N339 61 aa7.73□□□□□ -1.17
LSM8-203ENST00000422760 KRTAP9-6A0A140TA67 174 aa7.68□□□□□ -1.18
LSM8-203ENST00000422760 KRTAP4-3Q9BYR4 195 aa7.66□□□□□ -1.18
LSM8-203ENST00000422760 LCE5AQ5TCM9 118 aa7.66□□□□□ -1.18
LSM8-203ENST00000422760 KRTAP5-9P26371 169 aa7.63□□□□□ -1.19
LSM8-203ENST00000422760 MDN1Q9NU22 5596 aa7.52□□□□□ -1.2
LSM8-203ENST00000422760 LOC100996750A0A140TA64 210 aa7.5□□□□□ -1.21
LSM8-203ENST00000422760 KRTAP4-6Q9BYQ5 205 aa7.5□□□□□ -1.21
LSM8-203ENST00000422760 LCE1AQ5T7P2 110 aa7.46□□□□□ -1.22
LSM8-203ENST00000422760 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.43□□□□□ -1.22
LSM8-203ENST00000422760 DSTQ03001 7570 aaKnown RBP7.39□□□□□ -1.23
LSM8-203ENST00000422760 SPRR2EP22531 72 aa7.36□□□□□ -1.23
LSM8-203ENST00000422760 SPRR2BP35325 72 aa7.36□□□□□ -1.23
LSM8-203ENST00000422760 SPRR2AP35326 72 aa7.36□□□□□ -1.23
LSM8-203ENST00000422760 KRTAP6-3Q3LI67 103 aa7.31□□□□□ -1.24
LSM8-203ENST00000422760 SPRR2DP22532 72 aa7.07□□□□□ -1.28
LSM8-203ENST00000422760 KRTAP9-7A8MTY7 169 aa7□□□□□ -1.29
LSM8-203ENST00000422760 KRTAP5-5Q701N2 237 aaPredicted RBP6.93□□□□□ -1.3
LSM8-203ENST00000422760 MT1AP04731 61 aa6.86□□□□□ -1.31
LSM8-203ENST00000422760 NEBP20929 6669 aa6.86□□□□□ -1.31
LSM8-203ENST00000422760 KRTAP6-1Q3LI64 71 aa6.86□□□□□ -1.31
LSM8-203ENST00000422760 KRTAP12-4P60329 112 aa6.78□□□□□ -1.32
LSM8-203ENST00000422760 LCE3BQ5TA77 95 aa6.76□□□□□ -1.33
LSM8-203ENST00000422760 SYNE1Q8NF91 8797 aaKnown RBP6.66□□□□□ -1.34
LSM8-203ENST00000422760 KRTAP9-4Q9BYQ2 154 aa6.48□□□□□ -1.37
LSM8-203ENST00000422760 LCE3DQ9BYE3 92 aa6.46□□□□□ -1.38
LSM8-203ENST00000422760 KRTAP4-9Q9BYQ8 210 aa6.46□□□□□ -1.38
LSM8-203ENST00000422760 KRTAP5-4Q6L8H1 288 aa6.44□□□□□ -1.38
LSM8-203ENST00000422760 LCE3EQ5T5B0 92 aa6.4□□□□□ -1.39
LSM8-203ENST00000422760 KRTAP6-2Q3LI66 62 aa6.25□□□□□ -1.41
LSM8-203ENST00000422760 LCE4AQ5TA78 99 aa6.22□□□□□ -1.41
LSM8-203ENST00000422760 KRTAP2-2Q9BYT5 123 aa6.21□□□□□ -1.42
LSM8-203ENST00000422760 MT3P25713 68 aa6.18□□□□□ -1.42
LSM8-203ENST00000422760 MT4P47944 62 aa6.17□□□□□ -1.42
LSM8-203ENST00000422760 KRTAP20-1Q3LI63 56 aa6.17□□□□□ -1.42
LSM8-203ENST00000422760 KRTAP9-9Q9BYP9 154 aa6.07□□□□□ -1.44
LSM8-203ENST00000422760 KRTAP20-2Q3LI61 65 aa6.04□□□□□ -1.44
LSM8-203ENST00000422760 HMCN1Q96RW7 5635 aa6□□□□□ -1.45
LSM8-203ENST00000422760 LCE1DQ5T752 114 aa5.99□□□□□ -1.45
LSM8-203ENST00000422760 PRM1P04553 51 aa5.93□□□□□ -1.46
LSM8-203ENST00000422760 KRTAP4-12Q9BQ66 201 aa5.91□□□□□ -1.46
LSM8-203ENST00000422760 KRTAP5-2Q701N4 177 aa5.91□□□□□ -1.46
LSM8-203ENST00000422760 OBSCNQ5VST9 7968 aa5.88□□□□□ -1.47
LSM8-203ENST00000422760 KRTAP5-3Q6L8H2 238 aa5.79□□□□□ -1.48
LSM8-203ENST00000422760 KRTAP4-2Q9BYR5 136 aa5.76□□□□□ -1.49
LSM8-203ENST00000422760 KRTAP4-11Q9BYQ6 195 aa5.36□□□□□ -1.55
LSM8-203ENST00000422760 LCE1EQ5T753 118 aa5.27□□□□□ -1.57
LSM8-203ENST00000422760 AHNAK2Q8IVF2 5795 aa5.13□□□□□ -1.59
LSM8-203ENST00000422760 MUC5ACP98088 5654 aa5.11□□□□□ -1.59
LSM8-203ENST00000422760 KRTAP5-1Q6L8H4 278 aa5.08□□□□□ -1.6
LSM8-203ENST00000422760 LCE1BQ5T7P3 118 aa5.03□□□□□ -1.6
LSM8-203ENST00000422760 KRTAP5-10Q6L8G5 202 aa5.01□□□□□ -1.61
LSM8-203ENST00000422760 KRTAP5-8O75690 187 aa4.95□□□□□ -1.62
LSM8-203ENST00000422760 LCE1CQ5T751 118 aa4.93□□□□□ -1.62
LSM8-203ENST00000422760 KRTAP5-7Q6L8G8 165 aa4.82□□□□□ -1.64
LSM8-203ENST00000422760 GPR98Q8WXG9 6306 aa4.81□□□□□ -1.64
LSM8-203ENST00000422760 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.64□□□□□ -1.67
LSM8-203ENST00000422760 KRTAP21-2Q3LI59 83 aa4.47□□□□□ -1.69
LSM8-203ENST00000422760 KRTAP5-11Q6L8G4 156 aa4.34□□□□□ -1.71
LSM8-203ENST00000422760 MUC5BQ9HC84 5762 aaPredicted RBP4.31□□□□□ -1.72
LSM8-203ENST00000422760 KRTAP4-4Q9BYR3 166 aa4.01□□□□□ -1.77
LSM8-203ENST00000422760 AHNAKQ09666 5890 aaKnown RBP3.89□□□□□ -1.79
LSM8-203ENST00000422760 KRTAP21-1Q3LI58 79 aa3.83□□□□□ -1.8
LSM8-203ENST00000422760 LCE1FQ5T754 118 aa3.77□□□□□ -1.81
LSM8-203ENST00000422760 PHGR1C9JFL3 82 aa3.73□□□□□ -1.81
LSM8-203ENST00000422760 MUC19Q7Z5P9 8384 aa3.5□□□□□ -1.85
LSM8-203ENST00000422760 MUC16Q8WXI7 14507 aa2.44□□□□□ -2.02
Retrieved 77 of 20,778 RNA–protein pairs in 129.8 ms