RNA–Protein interactions for RNA: ENST00000421127.6

CCDC17-202, Transcript of coiled-coil domain containing 17, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC17, Length 2,216 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC17-202ENST00000421127 KRTAP4-7Q9BYR0 210 aa6.42□□□□□ -1.38
CCDC17-202ENST00000421127 MACF1Q9UPN3 7388 aaKnown RBP6.41□□□□□ -1.38
CCDC17-202ENST00000421127 MT1LQ93083 61 aa6.36□□□□□ -1.39
CCDC17-202ENST00000421127 CRCT1Q9UGL9 99 aa6.34□□□□□ -1.39
CCDC17-202ENST00000421127 MT1EP04732 61 aa6.33□□□□□ -1.4
CCDC17-202ENST00000421127 SYNE2Q8WXH0 6885 aaKnown RBP6.27□□□□□ -1.41
CCDC17-202ENST00000421127 MUC12Q9UKN1 5478 aa6.22□□□□□ -1.41
CCDC17-202ENST00000421127 KRTAP9-6A0A140TA67 174 aa6.02□□□□□ -1.45
CCDC17-202ENST00000421127 MDN1Q9NU22 5596 aa6.02□□□□□ -1.45
CCDC17-202ENST00000421127 LOC100996750A0A140TA64 210 aa5.98□□□□□ -1.45
CCDC17-202ENST00000421127 SPRR2FQ96RM1 72 aa5.98□□□□□ -1.45
CCDC17-202ENST00000421127 KRTAP4-3Q9BYR4 195 aa5.97□□□□□ -1.45
CCDC17-202ENST00000421127 MT1GP13640 62 aa5.94□□□□□ -1.46
CCDC17-202ENST00000421127 MT1MQ8N339 61 aa5.9□□□□□ -1.46
CCDC17-202ENST00000421127 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.89□□□□□ -1.47
CCDC17-202ENST00000421127 KRTAP19-3Q7Z4W3 81 aa5.87□□□□□ -1.47
CCDC17-202ENST00000421127 DSTQ03001 7570 aaKnown RBP5.84□□□□□ -1.48
CCDC17-202ENST00000421127 KRTAP5-9P26371 169 aa5.82□□□□□ -1.48
CCDC17-202ENST00000421127 KRTAP12-4P60329 112 aa5.74□□□□□ -1.49
CCDC17-202ENST00000421127 LCE5AQ5TCM9 118 aa5.72□□□□□ -1.49
CCDC17-202ENST00000421127 LCE1AQ5T7P2 110 aa5.69□□□□□ -1.5
CCDC17-202ENST00000421127 KRTAP6-3Q3LI67 103 aa5.67□□□□□ -1.5
CCDC17-202ENST00000421127 SPRR2EP22531 72 aa5.63□□□□□ -1.51
CCDC17-202ENST00000421127 SPRR2BP35325 72 aa5.63□□□□□ -1.51
CCDC17-202ENST00000421127 SPRR2AP35326 72 aa5.63□□□□□ -1.51
CCDC17-202ENST00000421127 LCE3BQ5TA77 95 aa5.55□□□□□ -1.52
CCDC17-202ENST00000421127 KRTAP9-7A8MTY7 169 aa5.54□□□□□ -1.52
CCDC17-202ENST00000421127 NEBP20929 6669 aa5.52□□□□□ -1.53
CCDC17-202ENST00000421127 MT1AP04731 61 aa5.47□□□□□ -1.53
CCDC17-202ENST00000421127 KRTAP4-9Q9BYQ8 210 aa5.43□□□□□ -1.54
CCDC17-202ENST00000421127 SPRR2DP22532 72 aa5.41□□□□□ -1.54
CCDC17-202ENST00000421127 KRTAP6-1Q3LI64 71 aa5.38□□□□□ -1.55
CCDC17-202ENST00000421127 LCE3DQ9BYE3 92 aa5.31□□□□□ -1.56
CCDC17-202ENST00000421127 LCE3EQ5T5B0 92 aa5.27□□□□□ -1.57
CCDC17-202ENST00000421127 SYNE1Q8NF91 8797 aaKnown RBP5.2□□□□□ -1.58
CCDC17-202ENST00000421127 KRTAP5-5Q701N2 237 aaPredicted RBP5.18□□□□□ -1.58
CCDC17-202ENST00000421127 PRM1P04553 51 aa5.11□□□□□ -1.59
CCDC17-202ENST00000421127 KRTAP9-4Q9BYQ2 154 aa5.01□□□□□ -1.61
CCDC17-202ENST00000421127 KRTAP6-2Q3LI66 62 aa4.91□□□□□ -1.62
CCDC17-202ENST00000421127 KRTAP5-4Q6L8H1 288 aa4.87□□□□□ -1.63
CCDC17-202ENST00000421127 KRTAP20-1Q3LI63 56 aa4.87□□□□□ -1.63
CCDC17-202ENST00000421127 KRTAP2-2Q9BYT5 123 aa4.85□□□□□ -1.63
CCDC17-202ENST00000421127 MT3P25713 68 aa4.8□□□□□ -1.64
CCDC17-202ENST00000421127 MT4P47944 62 aa4.78□□□□□ -1.64
CCDC17-202ENST00000421127 KRTAP4-6Q9BYQ5 205 aa4.77□□□□□ -1.65
CCDC17-202ENST00000421127 HMCN1Q96RW7 5635 aa4.76□□□□□ -1.65
CCDC17-202ENST00000421127 OBSCNQ5VST9 7968 aa4.71□□□□□ -1.66
CCDC17-202ENST00000421127 LCE4AQ5TA78 99 aa4.7□□□□□ -1.66
CCDC17-202ENST00000421127 LCE1DQ5T752 114 aa4.66□□□□□ -1.66
CCDC17-202ENST00000421127 KRTAP20-2Q3LI61 65 aa4.59□□□□□ -1.67
CCDC17-202ENST00000421127 KRTAP5-2Q701N4 177 aa4.42□□□□□ -1.7
CCDC17-202ENST00000421127 KRTAP5-3Q6L8H2 238 aa4.42□□□□□ -1.7
CCDC17-202ENST00000421127 AHNAK2Q8IVF2 5795 aa4.17□□□□□ -1.74
CCDC17-202ENST00000421127 LCE1EQ5T753 118 aa4.05□□□□□ -1.76
CCDC17-202ENST00000421127 LCE1FQ5T754 118 aa4.01□□□□□ -1.77
CCDC17-202ENST00000421127 MUC5ACP98088 5654 aa4□□□□□ -1.77
CCDC17-202ENST00000421127 KRTAP4-11Q9BYQ6 195 aa3.97□□□□□ -1.77
CCDC17-202ENST00000421127 KRTAP5-1Q6L8H4 278 aa3.87□□□□□ -1.79
CCDC17-202ENST00000421127 KRTAP5-10Q6L8G5 202 aa3.85□□□□□ -1.79
CCDC17-202ENST00000421127 KRTAP5-8O75690 187 aa3.83□□□□□ -1.8
CCDC17-202ENST00000421127 LCE1BQ5T7P3 118 aa3.82□□□□□ -1.8
CCDC17-202ENST00000421127 GPR98Q8WXG9 6306 aa3.76□□□□□ -1.81
CCDC17-202ENST00000421127 KRTAP4-2Q9BYR5 136 aa3.72□□□□□ -1.81
CCDC17-202ENST00000421127 LCE1CQ5T751 118 aa3.65□□□□□ -1.83
CCDC17-202ENST00000421127 KRTAP5-7Q6L8G8 165 aa3.63□□□□□ -1.83
CCDC17-202ENST00000421127 MUC5BQ9HC84 5762 aaPredicted RBP3.52□□□□□ -1.85
CCDC17-202ENST00000421127 KRTAP21-2Q3LI59 83 aa3.47□□□□□ -1.85
CCDC17-202ENST00000421127 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.47□□□□□ -1.85
CCDC17-202ENST00000421127 KRTAP9-9Q9BYP9 154 aa3.43□□□□□ -1.86
CCDC17-202ENST00000421127 KRTAP21-1Q3LI58 79 aa3.24□□□□□ -1.89
CCDC17-202ENST00000421127 KRTAP5-11Q6L8G4 156 aa3.21□□□□□ -1.89
CCDC17-202ENST00000421127 KRTAP4-12Q9BQ66 201 aa3.19□□□□□ -1.9
CCDC17-202ENST00000421127 KRTAP4-4Q9BYR3 166 aa3.15□□□□□ -1.9
CCDC17-202ENST00000421127 AHNAKQ09666 5890 aaKnown RBP3.09□□□□□ -1.91
CCDC17-202ENST00000421127 MUC19Q7Z5P9 8384 aa2.9□□□□□ -1.94
CCDC17-202ENST00000421127 PHGR1C9JFL3 82 aa2.79□□□□□ -1.96
CCDC17-202ENST00000421127 MUC16Q8WXI7 14507 aa1.81□□□□□ -2.12
Retrieved 77 of 20,778 RNA–protein pairs in 112.5 ms