RNA–Protein interactions for RNA: ENST00000419308.6

FOXA2-202, Transcript of forkhead box A2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FOXA2, Length 2,422 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA2-202ENST00000419308 FCGBPQ9Y6R7 5405 aaPredicted RBP8.88□□□□□ -0.99
FOXA2-202ENST00000419308 LCE2DQ5TA82 110 aaPredicted RBP8.85□□□□□ -0.99
FOXA2-202ENST00000419308 MUC12Q9UKN1 5478 aa8.76□□□□□ -1.01
FOXA2-202ENST00000419308 KRTAP4-3Q9BYR4 195 aa8.75□□□□□ -1.01
FOXA2-202ENST00000419308 KRTAP19-3Q7Z4W3 81 aa8.73□□□□□ -1.01
FOXA2-202ENST00000419308 MT1MQ8N339 61 aa8.69□□□□□ -1.02
FOXA2-202ENST00000419308 MT1GP13640 62 aa8.69□□□□□ -1.02
FOXA2-202ENST00000419308 LOC100996750A0A140TA64 210 aa8.66□□□□□ -1.02
FOXA2-202ENST00000419308 SPRR2FQ96RM1 72 aa8.49□□□□□ -1.05
FOXA2-202ENST00000419308 LCE5AQ5TCM9 118 aa8.46□□□□□ -1.05
FOXA2-202ENST00000419308 CRCT1Q9UGL9 99 aa8.38□□□□□ -1.07
FOXA2-202ENST00000419308 MACF1Q9UPN3 7388 aaKnown RBP8.38□□□□□ -1.07
FOXA2-202ENST00000419308 DSTQ03001 7570 aaKnown RBP8.32□□□□□ -1.08
FOXA2-202ENST00000419308 KRTAP9-2Q9BYQ4 174 aa8.1□□□□□ -1.11
FOXA2-202ENST00000419308 SYNE2Q8WXH0 6885 aaKnown RBP8.09□□□□□ -1.11
FOXA2-202ENST00000419308 MDN1Q9NU22 5596 aa8.04□□□□□ -1.12
FOXA2-202ENST00000419308 KRTAP5-9P26371 169 aa7.98□□□□□ -1.13
FOXA2-202ENST00000419308 LCE1AQ5T7P2 110 aa7.96□□□□□ -1.14
FOXA2-202ENST00000419308 LCE3BQ5TA77 95 aa7.9□□□□□ -1.14
FOXA2-202ENST00000419308 KRTAP6-1Q3LI64 71 aa7.85□□□□□ -1.15
FOXA2-202ENST00000419308 KRTAP12-4P60329 112 aa7.83□□□□□ -1.16
FOXA2-202ENST00000419308 MT1AP04731 61 aa7.79□□□□□ -1.16
FOXA2-202ENST00000419308 SPRR2EP22531 72 aa7.76□□□□□ -1.17
FOXA2-202ENST00000419308 SPRR2BP35325 72 aa7.76□□□□□ -1.17
FOXA2-202ENST00000419308 SPRR2AP35326 72 aa7.76□□□□□ -1.17
FOXA2-202ENST00000419308 KRTAP5-5Q701N2 237 aaPredicted RBP7.73□□□□□ -1.17
FOXA2-202ENST00000419308 KRTAP4-9Q9BYQ8 210 aa7.7□□□□□ -1.18
FOXA2-202ENST00000419308 SYNE1Q8NF91 8797 aaKnown RBP7.61□□□□□ -1.19
FOXA2-202ENST00000419308 SPRR2DP22532 72 aa7.43□□□□□ -1.22
FOXA2-202ENST00000419308 LCE3DQ9BYE3 92 aa7.42□□□□□ -1.22
FOXA2-202ENST00000419308 KRTAP6-3Q3LI67 103 aa7.36□□□□□ -1.23
FOXA2-202ENST00000419308 KRTAP9-4Q9BYQ2 154 aa7.35□□□□□ -1.23
FOXA2-202ENST00000419308 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.31□□□□□ -1.24
FOXA2-202ENST00000419308 LCE3EQ5T5B0 92 aa7.31□□□□□ -1.24
FOXA2-202ENST00000419308 KRTAP6-2Q3LI66 62 aa7.07□□□□□ -1.28
FOXA2-202ENST00000419308 KRTAP9-7A8MTY7 169 aa7.01□□□□□ -1.29
FOXA2-202ENST00000419308 MT3P25713 68 aa7□□□□□ -1.29
FOXA2-202ENST00000419308 KRTAP9-6A0A140TA67 174 aa7□□□□□ -1.29
FOXA2-202ENST00000419308 PRM1P04553 51 aa6.89□□□□□ -1.31
FOXA2-202ENST00000419308 KRTAP5-4Q6L8H1 288 aa6.88□□□□□ -1.31
FOXA2-202ENST00000419308 OBSCNQ5VST9 7968 aa6.82□□□□□ -1.32
FOXA2-202ENST00000419308 NEBP20929 6669 aa6.8□□□□□ -1.32
FOXA2-202ENST00000419308 KRTAP4-6Q9BYQ5 205 aa6.61□□□□□ -1.35
FOXA2-202ENST00000419308 MT4P47944 62 aa6.54□□□□□ -1.36
FOXA2-202ENST00000419308 LCE4AQ5TA78 99 aa6.47□□□□□ -1.37
FOXA2-202ENST00000419308 KRTAP20-2Q3LI61 65 aa6.45□□□□□ -1.38
FOXA2-202ENST00000419308 KRTAP5-2Q701N4 177 aa6.41□□□□□ -1.38
FOXA2-202ENST00000419308 HMCN1Q96RW7 5635 aa6.28□□□□□ -1.4
FOXA2-202ENST00000419308 LCE1DQ5T752 114 aa6.2□□□□□ -1.42
FOXA2-202ENST00000419308 KRTAP2-2Q9BYT5 123 aa6.18□□□□□ -1.42
FOXA2-202ENST00000419308 KRTAP5-3Q6L8H2 238 aa6.16□□□□□ -1.42
FOXA2-202ENST00000419308 KRTAP20-1Q3LI63 56 aa6.13□□□□□ -1.43
FOXA2-202ENST00000419308 MUC5ACP98088 5654 aa5.88□□□□□ -1.47
FOXA2-202ENST00000419308 LCE1EQ5T753 118 aa5.79□□□□□ -1.48
FOXA2-202ENST00000419308 LCE1BQ5T7P3 118 aa5.64□□□□□ -1.51
FOXA2-202ENST00000419308 KRTAP5-10Q6L8G5 202 aa5.5□□□□□ -1.53
FOXA2-202ENST00000419308 KRTAP4-2Q9BYR5 136 aa5.48□□□□□ -1.53
FOXA2-202ENST00000419308 LCE1CQ5T751 118 aa5.46□□□□□ -1.53
FOXA2-202ENST00000419308 KRTAP5-1Q6L8H4 278 aa5.46□□□□□ -1.53
FOXA2-202ENST00000419308 KRTAP4-11Q9BYQ6 195 aa5.36□□□□□ -1.55
FOXA2-202ENST00000419308 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.16□□□□□ -1.58
FOXA2-202ENST00000419308 KRTAP5-8O75690 187 aa5.14□□□□□ -1.59
FOXA2-202ENST00000419308 KRTAP21-2Q3LI59 83 aa5.09□□□□□ -1.59
FOXA2-202ENST00000419308 KRTAP5-7Q6L8G8 165 aa5.07□□□□□ -1.6
FOXA2-202ENST00000419308 AHNAK2Q8IVF2 5795 aa5□□□□□ -1.61
FOXA2-202ENST00000419308 KRTAP5-11Q6L8G4 156 aa4.71□□□□□ -1.66
FOXA2-202ENST00000419308 KRTAP4-4Q9BYR3 166 aa4.61□□□□□ -1.67
FOXA2-202ENST00000419308 MUC5BQ9HC84 5762 aaPredicted RBP4.57□□□□□ -1.68
FOXA2-202ENST00000419308 KRTAP4-12Q9BQ66 201 aa4.43□□□□□ -1.7
FOXA2-202ENST00000419308 KRTAP9-9Q9BYP9 154 aa4.36□□□□□ -1.71
FOXA2-202ENST00000419308 KRTAP21-1Q3LI58 79 aa4.33□□□□□ -1.72
FOXA2-202ENST00000419308 MUC19Q7Z5P9 8384 aa4.24□□□□□ -1.73
FOXA2-202ENST00000419308 GPR98Q8WXG9 6306 aa4.24□□□□□ -1.73
FOXA2-202ENST00000419308 PHGR1C9JFL3 82 aa4.07□□□□□ -1.76
FOXA2-202ENST00000419308 LCE1FQ5T754 118 aa3.91□□□□□ -1.78
FOXA2-202ENST00000419308 AHNAKQ09666 5890 aaKnown RBP3.52□□□□□ -1.85
FOXA2-202ENST00000419308 MUC16Q8WXI7 14507 aa2.68□□□□□ -1.98
Retrieved 77 of 20,778 RNA–protein pairs in 49.8 ms