RNA–Protein interactions for RNA: ENST00000419007.5

SEMA3B-203, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 3,283 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-203ENST00000419007 MT1LQ93083 61 aa5.19□□□□□ -1.58
SEMA3B-203ENST00000419007 KRTAP2-3P0C7H8 128 aa5.17□□□□□ -1.58
SEMA3B-203ENST00000419007 KRTAP2-4Q9BYR9 128 aa5.17□□□□□ -1.58
SEMA3B-203ENST00000419007 KRTAP2-1Q9BYU5 128 aa5.17□□□□□ -1.58
SEMA3B-203ENST00000419007 MT1EP04732 61 aa5.17□□□□□ -1.58
SEMA3B-203ENST00000419007 SYNE2Q8WXH0 6885 aaKnown RBP5.15□□□□□ -1.59
SEMA3B-203ENST00000419007 MUC12Q9UKN1 5478 aa5.06□□□□□ -1.6
SEMA3B-203ENST00000419007 KRTAP19-4Q3LI73 84 aa5.03□□□□□ -1.6
SEMA3B-203ENST00000419007 LOC100996750A0A140TA64 210 aa5.02□□□□□ -1.61
SEMA3B-203ENST00000419007 KRTAP4-3Q9BYR4 195 aa5.02□□□□□ -1.61
SEMA3B-203ENST00000419007 KRTAP9-6A0A140TA67 174 aa4.99□□□□□ -1.61
SEMA3B-203ENST00000419007 MT1GP13640 62 aa4.96□□□□□ -1.62
SEMA3B-203ENST00000419007 DSTQ03001 7570 aaKnown RBP4.92□□□□□ -1.62
SEMA3B-203ENST00000419007 SPRR2FQ96RM1 72 aa4.9□□□□□ -1.62
SEMA3B-203ENST00000419007 MDN1Q9NU22 5596 aa4.89□□□□□ -1.63
SEMA3B-203ENST00000419007 MT1MQ8N339 61 aa4.83□□□□□ -1.64
SEMA3B-203ENST00000419007 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.81□□□□□ -1.64
SEMA3B-203ENST00000419007 KRTAP19-3Q7Z4W3 81 aa4.81□□□□□ -1.64
SEMA3B-203ENST00000419007 KRTAP12-4P60329 112 aa4.74□□□□□ -1.65
SEMA3B-203ENST00000419007 LCE3BQ5TA77 95 aa4.65□□□□□ -1.66
SEMA3B-203ENST00000419007 SYNE1Q8NF91 8797 aaKnown RBP4.64□□□□□ -1.67
SEMA3B-203ENST00000419007 SPRR2EP22531 72 aa4.62□□□□□ -1.67
SEMA3B-203ENST00000419007 SPRR2BP35325 72 aa4.62□□□□□ -1.67
SEMA3B-203ENST00000419007 SPRR2AP35326 72 aa4.62□□□□□ -1.67
SEMA3B-203ENST00000419007 KRTAP5-9P26371 169 aa4.61□□□□□ -1.67
SEMA3B-203ENST00000419007 KRTAP9-7A8MTY7 169 aa4.6□□□□□ -1.67
SEMA3B-203ENST00000419007 LCE5AQ5TCM9 118 aa4.59□□□□□ -1.67
SEMA3B-203ENST00000419007 KRTAP4-9Q9BYQ8 210 aa4.59□□□□□ -1.67
SEMA3B-203ENST00000419007 KRTAP6-3Q3LI67 103 aa4.58□□□□□ -1.68
SEMA3B-203ENST00000419007 LCE1AQ5T7P2 110 aa4.57□□□□□ -1.68
SEMA3B-203ENST00000419007 OBSCNQ5VST9 7968 aa4.54□□□□□ -1.68
SEMA3B-203ENST00000419007 KRTAP6-1Q3LI64 71 aa4.45□□□□□ -1.7
SEMA3B-203ENST00000419007 SPRR2DP22532 72 aa4.43□□□□□ -1.7
SEMA3B-203ENST00000419007 NEBP20929 6669 aa4.38□□□□□ -1.71
SEMA3B-203ENST00000419007 LCE3DQ9BYE3 92 aa4.36□□□□□ -1.71
SEMA3B-203ENST00000419007 KRTAP2-2Q9BYT5 123 aa4.36□□□□□ -1.71
SEMA3B-203ENST00000419007 MT1AP04731 61 aa4.34□□□□□ -1.72
SEMA3B-203ENST00000419007 LCE3EQ5T5B0 92 aa4.29□□□□□ -1.72
SEMA3B-203ENST00000419007 LCE1EQ5T753 118 aa4.28□□□□□ -1.72
SEMA3B-203ENST00000419007 PRM1P04553 51 aa4.21□□□□□ -1.74
SEMA3B-203ENST00000419007 KRTAP5-5Q701N2 237 aaPredicted RBP4.18□□□□□ -1.74
SEMA3B-203ENST00000419007 KRTAP9-4Q9BYQ2 154 aa4.06□□□□□ -1.76
SEMA3B-203ENST00000419007 LCE1DQ5T752 114 aa4.05□□□□□ -1.76
SEMA3B-203ENST00000419007 KRTAP20-1Q3LI63 56 aa4.03□□□□□ -1.76
SEMA3B-203ENST00000419007 KRTAP6-2Q3LI66 62 aa4.03□□□□□ -1.76
SEMA3B-203ENST00000419007 LCE1FQ5T754 118 aa4.02□□□□□ -1.77
SEMA3B-203ENST00000419007 MT4P47944 62 aa3.97□□□□□ -1.77
SEMA3B-203ENST00000419007 MT3P25713 68 aa3.91□□□□□ -1.78
SEMA3B-203ENST00000419007 KRTAP4-6Q9BYQ5 205 aa3.87□□□□□ -1.79
SEMA3B-203ENST00000419007 HMCN1Q96RW7 5635 aa3.85□□□□□ -1.79
SEMA3B-203ENST00000419007 KRTAP5-4Q6L8H1 288 aa3.8□□□□□ -1.8
SEMA3B-203ENST00000419007 LCE4AQ5TA78 99 aa3.76□□□□□ -1.81
SEMA3B-203ENST00000419007 KRTAP20-2Q3LI61 65 aa3.67□□□□□ -1.82
SEMA3B-203ENST00000419007 MUC19Q7Z5P9 8384 aa3.55□□□□□ -1.84
SEMA3B-203ENST00000419007 KRTAP5-3Q6L8H2 238 aa3.47□□□□□ -1.85
SEMA3B-203ENST00000419007 KRTAP5-2Q701N4 177 aa3.42□□□□□ -1.86
SEMA3B-203ENST00000419007 MUC5ACP98088 5654 aa3.35□□□□□ -1.87
SEMA3B-203ENST00000419007 AHNAK2Q8IVF2 5795 aa3.31□□□□□ -1.88
SEMA3B-203ENST00000419007 LCE1BQ5T7P3 118 aa3.28□□□□□ -1.88
SEMA3B-203ENST00000419007 KRTAP4-11Q9BYQ6 195 aa3.23□□□□□ -1.89
SEMA3B-203ENST00000419007 KRTAP9-9Q9BYP9 154 aa3.21□□□□□ -1.9
SEMA3B-203ENST00000419007 GPR98Q8WXG9 6306 aa3.15□□□□□ -1.91
SEMA3B-203ENST00000419007 KRTAP5-10Q6L8G5 202 aa3.11□□□□□ -1.91
SEMA3B-203ENST00000419007 KRTAP5-8O75690 187 aa3.06□□□□□ -1.92
SEMA3B-203ENST00000419007 KRTAP5-1Q6L8H4 278 aa3.05□□□□□ -1.92
SEMA3B-203ENST00000419007 KRTAP4-2Q9BYR5 136 aa2.96□□□□□ -1.94
SEMA3B-203ENST00000419007 MUC5BQ9HC84 5762 aaPredicted RBP2.94□□□□□ -1.94
SEMA3B-203ENST00000419007 LCE1CQ5T751 118 aa2.92□□□□□ -1.94
SEMA3B-203ENST00000419007 KRTAP21-2Q3LI59 83 aa2.81□□□□□ -1.96
SEMA3B-203ENST00000419007 KRTAP5-7Q6L8G8 165 aa2.78□□□□□ -1.96
SEMA3B-203ENST00000419007 KRTAP4-4Q9BYR3 166 aa2.74□□□□□ -1.97
SEMA3B-203ENST00000419007 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.71□□□□□ -1.98
SEMA3B-203ENST00000419007 KRTAP4-12Q9BQ66 201 aa2.67□□□□□ -1.98
SEMA3B-203ENST00000419007 KRTAP21-1Q3LI58 79 aa2.55□□□□□ -2
SEMA3B-203ENST00000419007 KRTAP5-11Q6L8G4 156 aa2.51□□□□□ -2.01
SEMA3B-203ENST00000419007 AHNAKQ09666 5890 aaKnown RBP2.5□□□□□ -2.01
SEMA3B-203ENST00000419007 PHGR1C9JFL3 82 aa2.19□□□□□ -2.06
SEMA3B-203ENST00000419007 MUC16Q8WXI7 14507 aa1.46□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 70.7 ms