RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 LCE3AQ5TA76 89 aa5.9□□□□□ -1.46
LINC00404-201ENST00000418660 PP632Q6XCG6 107 aa5.9□□□□□ -1.46
LINC00404-201ENST00000418660 MT1LQ93083 61 aa5.86□□□□□ -1.47
LINC00404-201ENST00000418660 MT1MQ8N339 61 aa5.84□□□□□ -1.47
LINC00404-201ENST00000418660 UQCR11O14957 56 aa5.83□□□□□ -1.48
LINC00404-201ENST00000418660 KRTAP4-9Q9BYQ8 210 aa5.79□□□□□ -1.48
LINC00404-201ENST00000418660 PSPHP1O15172 72 aa5.75□□□□□ -1.49
LINC00404-201ENST00000418660 MIR22HGQ0VDD5 57 aa5.69□□□□□ -1.5
LINC00404-201ENST00000418660 KRTAP4-3Q9BYR4 195 aa5.69□□□□□ -1.5
LINC00404-201ENST00000418660 KRTAP12-3P60328 96 aa5.68□□□□□ -1.5
LINC00404-201ENST00000418660 LCE4AQ5TA78 99 aa5.68□□□□□ -1.5
LINC00404-201ENST00000418660 A6NED7 52 aa5.67□□□□□ -1.5
LINC00404-201ENST00000418660 PMAIP1Q13794 54 aa5.66□□□□□ -1.5
LINC00404-201ENST00000418660 LCE1DQ5T752 114 aa5.66□□□□□ -1.5
LINC00404-201ENST00000418660 CDC42SE1Q9NRR8 79 aa5.66□□□□□ -1.5
LINC00404-201ENST00000418660 KRTAP25-1Q3LHN0 102 aa5.61□□□□□ -1.51
LINC00404-201ENST00000418660 K7ERS5 55 aa5.6□□□□□ -1.51
LINC00404-201ENST00000418660 MT4P47944 62 aa5.6□□□□□ -1.51
LINC00404-201ENST00000418660 KRTAP5-4Q6L8H1 288 aa5.57□□□□□ -1.52
LINC00404-201ENST00000418660 KTN1-AS1Q86SY8 53 aa5.57□□□□□ -1.52
LINC00404-201ENST00000418660 LOC100996750A0A140TA64 210 aa5.56□□□□□ -1.52
LINC00404-201ENST00000418660 KRTAP4-6Q9BYQ5 205 aa5.56□□□□□ -1.52
LINC00404-201ENST00000418660 KRTAP4-7Q9BYR0 210 aa5.56□□□□□ -1.52
LINC00404-201ENST00000418660 GPR98Q8WXG9 6306 aa5.53□□□□□ -1.52
LINC00404-201ENST00000418660 HMCN1Q96RW7 5635 aa5.46□□□□□ -1.53
LINC00404-201ENST00000418660 KRTAP23-1A1A580 65 aa5.41□□□□□ -1.54
LINC00404-201ENST00000418660 KRTAP19-4Q3LI73 84 aa5.39□□□□□ -1.55
LINC00404-201ENST00000418660 KRTAP5-5Q701N2 237 aaPredicted RBP5.36□□□□□ -1.55
LINC00404-201ENST00000418660 KRTAP15-1Q3LI76 137 aa5.31□□□□□ -1.56
LINC00404-201ENST00000418660 H3BS24 57 aa5.28□□□□□ -1.56
LINC00404-201ENST00000418660 KRTAP5-10Q6L8G5 202 aa5.26□□□□□ -1.57
LINC00404-201ENST00000418660 SPRR5A0A1B0GTR4 108 aa5.25□□□□□ -1.57
LINC00404-201ENST00000418660 KRTAP20-2Q3LI61 65 aa5.25□□□□□ -1.57
LINC00404-201ENST00000418660 AHNAK2Q8IVF2 5795 aa5.25□□□□□ -1.57
LINC00404-201ENST00000418660 LCE3CQ5T5A8 94 aa5.23□□□□□ -1.57
LINC00404-201ENST00000418660 KRTAP12-4P60329 112 aa5.22□□□□□ -1.57
LINC00404-201ENST00000418660 ROMO1P60602 79 aa5.21□□□□□ -1.58
LINC00404-201ENST00000418660 KRTAP5-3Q6L8H2 238 aa5.15□□□□□ -1.59
LINC00404-201ENST00000418660 SYNE1Q8NF91 8797 aaKnown RBP5.13□□□□□ -1.59
LINC00404-201ENST00000418660 PRAC1Q96KF2 57 aa5.09□□□□□ -1.59
LINC00404-201ENST00000418660 KRTAP5-7Q6L8G8 165 aa5.06□□□□□ -1.6
LINC00404-201ENST00000418660 MT1AP04731 61 aa4.99□□□□□ -1.61
LINC00404-201ENST00000418660 KRTAP4-12Q9BQ66 201 aa4.99□□□□□ -1.61
LINC00404-201ENST00000418660 KRTAP6-1Q3LI64 71 aa4.95□□□□□ -1.62
LINC00404-201ENST00000418660 A0A0A0MQY5 61 aa4.92□□□□□ -1.62
LINC00404-201ENST00000418660 KRTAP9-6A8MVA2 160 aa4.92□□□□□ -1.62
LINC00404-201ENST00000418660 KRTAP5-2Q701N4 177 aa4.88□□□□□ -1.63
LINC00404-201ENST00000418660 KRTAP9-4Q9BYQ2 154 aa4.83□□□□□ -1.64
LINC00404-201ENST00000418660 KRTAP4-11Q9BYQ6 195 aa4.79□□□□□ -1.64
LINC00404-201ENST00000418660 KRTAP9-9Q9BYP9 154 aa4.78□□□□□ -1.64
LINC00404-201ENST00000418660 KRTAP6-2Q3LI66 62 aa4.74□□□□□ -1.65
LINC00404-201ENST00000418660 KRTAP5-8O75690 187 aa4.64□□□□□ -1.67
LINC00404-201ENST00000418660 MT3P25713 68 aa4.58□□□□□ -1.68
LINC00404-201ENST00000418660 OBSCNQ5VST9 7968 aa4.51□□□□□ -1.69
LINC00404-201ENST00000418660 KRTAP5-1Q6L8H4 278 aa4.37□□□□□ -1.71
LINC00404-201ENST00000418660 MUC5ACP98088 5654 aa4.36□□□□□ -1.71
LINC00404-201ENST00000418660 NDUFAF8A1L188 74 aa4.35□□□□□ -1.71
LINC00404-201ENST00000418660 KRTAP4-2Q9BYR5 136 aa4.32□□□□□ -1.72
LINC00404-201ENST00000418660 AHNAKQ09666 5890 aaKnown RBP4.29□□□□□ -1.72
LINC00404-201ENST00000418660 MUC5BQ9HC84 5762 aaPredicted RBP4.29□□□□□ -1.72
LINC00404-201ENST00000418660 LUZP6Q538Z0 58 aa4.28□□□□□ -1.72
LINC00404-201ENST00000418660 LCE1EQ5T753 118 aa4.21□□□□□ -1.74
LINC00404-201ENST00000418660 LCE1BQ5T7P3 118 aa3.94□□□□□ -1.78
LINC00404-201ENST00000418660 LCE1CQ5T751 118 aa3.9□□□□□ -1.79
LINC00404-201ENST00000418660 LCE3DQ9BYE3 92 aa3.77□□□□□ -1.81
LINC00404-201ENST00000418660 INE1O15225 51 aa3.75□□□□□ -1.81
LINC00404-201ENST00000418660 LCE3EQ5T5B0 92 aa3.55□□□□□ -1.84
LINC00404-201ENST00000418660 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.55□□□□□ -1.84
LINC00404-201ENST00000418660 KRTAP5-11Q6L8G4 156 aa3.53□□□□□ -1.84
LINC00404-201ENST00000418660 LCE1FQ5T754 118 aa3.45□□□□□ -1.86
LINC00404-201ENST00000418660 KRTAP21-2Q3LI59 83 aa3.27□□□□□ -1.89
LINC00404-201ENST00000418660 PHGR1C9JFL3 82 aa3.06□□□□□ -1.92
LINC00404-201ENST00000418660 KRTAP4-4Q9BYR3 166 aa2.98□□□□□ -1.93
LINC00404-201ENST00000418660 MUC19Q7Z5P9 8384 aa2.79□□□□□ -1.96
LINC00404-201ENST00000418660 PRM1P04553 51 aa2.65□□□□□ -1.99
LINC00404-201ENST00000418660 KRTAP21-1Q3LI58 79 aa2.33□□□□□ -2.04
LINC00404-201ENST00000418660 MUC16Q8WXI7 14507 aa2.02□□□□□ -2.09
Retrieved 77 of 20,778 RNA–protein pairs in 82.5 ms