RNA–Protein interactions for RNA: ENST00000417996.2

KRT3-201, Transcript of keratin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT3, Length 2,319 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3-201ENST00000417996 KRTAP2-3P0C7H8 128 aa6.91□□□□□ -1.3
KRT3-201ENST00000417996 KRTAP2-4Q9BYR9 128 aa6.91□□□□□ -1.3
KRT3-201ENST00000417996 KRTAP2-1Q9BYU5 128 aa6.91□□□□□ -1.3
KRT3-201ENST00000417996 CRCT1Q9UGL9 99 aa6.77□□□□□ -1.33
KRT3-201ENST00000417996 KRTAP4-3Q9BYR4 195 aa6.75□□□□□ -1.33
KRT3-201ENST00000417996 LOC100996750A0A140TA64 210 aa6.71□□□□□ -1.34
KRT3-201ENST00000417996 MACF1Q9UPN3 7388 aaKnown RBP6.67□□□□□ -1.34
KRT3-201ENST00000417996 MT1GP13640 62 aa6.64□□□□□ -1.35
KRT3-201ENST00000417996 MUC12Q9UKN1 5478 aa6.64□□□□□ -1.35
KRT3-201ENST00000417996 KRTAP19-3Q7Z4W3 81 aa6.6□□□□□ -1.35
KRT3-201ENST00000417996 MT1MQ8N339 61 aa6.6□□□□□ -1.35
KRT3-201ENST00000417996 SYNE2Q8WXH0 6885 aaKnown RBP6.55□□□□□ -1.36
KRT3-201ENST00000417996 KRTAP9-6A0A140TA67 174 aa6.48□□□□□ -1.37
KRT3-201ENST00000417996 SPRR2FQ96RM1 72 aa6.41□□□□□ -1.38
KRT3-201ENST00000417996 LCE5AQ5TCM9 118 aa6.37□□□□□ -1.39
KRT3-201ENST00000417996 DSTQ03001 7570 aaKnown RBP6.31□□□□□ -1.4
KRT3-201ENST00000417996 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.28□□□□□ -1.4
KRT3-201ENST00000417996 MDN1Q9NU22 5596 aa6.21□□□□□ -1.42
KRT3-201ENST00000417996 KRTAP12-4P60329 112 aa6.15□□□□□ -1.43
KRT3-201ENST00000417996 LCE3BQ5TA77 95 aa6.15□□□□□ -1.43
KRT3-201ENST00000417996 KRTAP5-9P26371 169 aa6.14□□□□□ -1.43
KRT3-201ENST00000417996 KRTAP6-3Q3LI67 103 aa6.03□□□□□ -1.44
KRT3-201ENST00000417996 KRTAP4-9Q9BYQ8 210 aa6.03□□□□□ -1.44
KRT3-201ENST00000417996 KRTAP6-1Q3LI64 71 aa6.02□□□□□ -1.45
KRT3-201ENST00000417996 LCE1AQ5T7P2 110 aa5.99□□□□□ -1.45
KRT3-201ENST00000417996 SPRR2EP22531 72 aa5.95□□□□□ -1.46
KRT3-201ENST00000417996 SPRR2BP35325 72 aa5.95□□□□□ -1.46
KRT3-201ENST00000417996 SPRR2AP35326 72 aa5.95□□□□□ -1.46
KRT3-201ENST00000417996 KRTAP9-7A8MTY7 169 aa5.94□□□□□ -1.46
KRT3-201ENST00000417996 MT1AP04731 61 aa5.92□□□□□ -1.46
KRT3-201ENST00000417996 SYNE1Q8NF91 8797 aaKnown RBP5.84□□□□□ -1.47
KRT3-201ENST00000417996 KRTAP5-5Q701N2 237 aaPredicted RBP5.81□□□□□ -1.48
KRT3-201ENST00000417996 NEBP20929 6669 aa5.77□□□□□ -1.49
KRT3-201ENST00000417996 LCE3DQ9BYE3 92 aa5.75□□□□□ -1.49
KRT3-201ENST00000417996 SPRR2DP22532 72 aa5.71□□□□□ -1.49
KRT3-201ENST00000417996 LCE3EQ5T5B0 92 aa5.67□□□□□ -1.5
KRT3-201ENST00000417996 KRTAP9-4Q9BYQ2 154 aa5.58□□□□□ -1.52
KRT3-201ENST00000417996 PRM1P04553 51 aa5.45□□□□□ -1.54
KRT3-201ENST00000417996 KRTAP6-2Q3LI66 62 aa5.4□□□□□ -1.54
KRT3-201ENST00000417996 MT3P25713 68 aa5.32□□□□□ -1.56
KRT3-201ENST00000417996 OBSCNQ5VST9 7968 aa5.22□□□□□ -1.57
KRT3-201ENST00000417996 KRTAP20-1Q3LI63 56 aa5.22□□□□□ -1.57
KRT3-201ENST00000417996 KRTAP2-2Q9BYT5 123 aa5.17□□□□□ -1.58
KRT3-201ENST00000417996 KRTAP5-4Q6L8H1 288 aa5.11□□□□□ -1.59
KRT3-201ENST00000417996 MT4P47944 62 aa5.06□□□□□ -1.6
KRT3-201ENST00000417996 KRTAP4-6Q9BYQ5 205 aa5.02□□□□□ -1.61
KRT3-201ENST00000417996 LCE4AQ5TA78 99 aa4.96□□□□□ -1.61
KRT3-201ENST00000417996 HMCN1Q96RW7 5635 aa4.94□□□□□ -1.62
KRT3-201ENST00000417996 LCE1DQ5T752 114 aa4.93□□□□□ -1.62
KRT3-201ENST00000417996 KRTAP20-2Q3LI61 65 aa4.83□□□□□ -1.64
KRT3-201ENST00000417996 KRTAP5-2Q701N4 177 aa4.77□□□□□ -1.65
KRT3-201ENST00000417996 KRTAP5-3Q6L8H2 238 aa4.64□□□□□ -1.67
KRT3-201ENST00000417996 MUC5ACP98088 5654 aa4.49□□□□□ -1.69
KRT3-201ENST00000417996 LCE1BQ5T7P3 118 aa4.35□□□□□ -1.71
KRT3-201ENST00000417996 AHNAK2Q8IVF2 5795 aa4.34□□□□□ -1.71
KRT3-201ENST00000417996 LCE1EQ5T753 118 aa4.3□□□□□ -1.72
KRT3-201ENST00000417996 KRTAP5-10Q6L8G5 202 aa4.2□□□□□ -1.74
KRT3-201ENST00000417996 KRTAP4-11Q9BYQ6 195 aa4.2□□□□□ -1.74
KRT3-201ENST00000417996 KRTAP5-1Q6L8H4 278 aa4.13□□□□□ -1.75
KRT3-201ENST00000417996 KRTAP4-2Q9BYR5 136 aa4.12□□□□□ -1.75
KRT3-201ENST00000417996 LCE1CQ5T751 118 aa4.09□□□□□ -1.76
KRT3-201ENST00000417996 KRTAP5-8O75690 187 aa4.05□□□□□ -1.76
KRT3-201ENST00000417996 GPR98Q8WXG9 6306 aa3.94□□□□□ -1.78
KRT3-201ENST00000417996 KRTAP21-2Q3LI59 83 aa3.87□□□□□ -1.79
KRT3-201ENST00000417996 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.83□□□□□ -1.8
KRT3-201ENST00000417996 KRTAP5-7Q6L8G8 165 aa3.81□□□□□ -1.8
KRT3-201ENST00000417996 MUC5BQ9HC84 5762 aaPredicted RBP3.64□□□□□ -1.83
KRT3-201ENST00000417996 KRTAP9-9Q9BYP9 154 aa3.61□□□□□ -1.83
KRT3-201ENST00000417996 KRTAP4-4Q9BYR3 166 aa3.6□□□□□ -1.83
KRT3-201ENST00000417996 KRTAP5-11Q6L8G4 156 aa3.5□□□□□ -1.85
KRT3-201ENST00000417996 KRTAP4-12Q9BQ66 201 aa3.39□□□□□ -1.87
KRT3-201ENST00000417996 KRTAP21-1Q3LI58 79 aa3.38□□□□□ -1.87
KRT3-201ENST00000417996 MUC19Q7Z5P9 8384 aa3.31□□□□□ -1.88
KRT3-201ENST00000417996 AHNAKQ09666 5890 aaKnown RBP3.22□□□□□ -1.89
KRT3-201ENST00000417996 PHGR1C9JFL3 82 aa3.04□□□□□ -1.92
KRT3-201ENST00000417996 LCE1FQ5T754 118 aa3.04□□□□□ -1.92
KRT3-201ENST00000417996 MUC16Q8WXI7 14507 aa2.02□□□□□ -2.09
Retrieved 77 of 20,778 RNA–protein pairs in 9.9 ms