RNA–Protein interactions for RNA: ENST00000417799.2

NIFKP3-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 3, humanhuman

BASIC

Gene NIFKP3, Length 865 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP3-201ENST00000417799 Q5VV11 94 aa2.54□□□□□ -2
NIFKP3-201ENST00000417799 UQCR11O14957 56 aa2.53□□□□□ -2
NIFKP3-201ENST00000417799 KRTAP19-8Q3LI54 63 aa2.53□□□□□ -2
NIFKP3-201ENST00000417799 LINC01554Q52M75 96 aa2.53□□□□□ -2
NIFKP3-201ENST00000417799 SPATA8Q6RVD6 105 aa2.53□□□□□ -2
NIFKP3-201ENST00000417799 A0A0D9SG42 100 aa2.5□□□□□ -2.01
NIFKP3-201ENST00000417799 MT1BP07438 61 aa2.5□□□□□ -2.01
NIFKP3-201ENST00000417799 A6NN06 94 aa2.49□□□□□ -2.01
NIFKP3-201ENST00000417799 A6NED7 52 aa2.48□□□□□ -2.01
NIFKP3-201ENST00000417799 MIR22HGQ0VDD5 57 aa2.48□□□□□ -2.01
NIFKP3-201ENST00000417799 PLAC4Q8WY50 150 aa2.48□□□□□ -2.01
NIFKP3-201ENST00000417799 USH2AO75445 5202 aa2.48□□□□□ -2.01
NIFKP3-201ENST00000417799 K7ERS5 55 aa2.47□□□□□ -2.01
NIFKP3-201ENST00000417799 KRTAP12-1P59990 96 aa2.44□□□□□ -2.02
NIFKP3-201ENST00000417799 CDC42SE1Q9NRR8 79 aa2.43□□□□□ -2.02
NIFKP3-201ENST00000417799 KRTAP25-1Q3LHN0 102 aa2.42□□□□□ -2.02
NIFKP3-201ENST00000417799 KRTAP19-6Q3LI70 58 aa2.42□□□□□ -2.02
NIFKP3-201ENST00000417799 CRCT1Q9UGL9 99 aa2.42□□□□□ -2.02
NIFKP3-201ENST00000417799 SSPOA2VEC9 5147 aa2.41□□□□□ -2.02
NIFKP3-201ENST00000417799 MT1XP80297 61 aa2.4□□□□□ -2.03
NIFKP3-201ENST00000417799 PRO2289Q9P1D8 64 aa2.39□□□□□ -2.03
NIFKP3-201ENST00000417799 FSIP2Q5CZC0 6907 aa2.38□□□□□ -2.03
NIFKP3-201ENST00000417799 BRK1Q8WUW1 75 aa2.37□□□□□ -2.03
NIFKP3-201ENST00000417799 C10orf95Q9H7T3 257 aa2.33□□□□□ -2.04
NIFKP3-201ENST00000417799 FCGBPQ9Y6R7 5405 aaPredicted RBP2.32□□□□□ -2.04
NIFKP3-201ENST00000417799 TNP1P09430 55 aa2.28□□□□□ -2.04
NIFKP3-201ENST00000417799 ROMO1P60602 79 aa2.28□□□□□ -2.04
NIFKP3-201ENST00000417799 KRTAP6-3Q3LI67 103 aa2.26□□□□□ -2.05
NIFKP3-201ENST00000417799 PMAIP1Q13794 54 aa2.25□□□□□ -2.05
NIFKP3-201ENST00000417799 KRTAP12-3P60328 96 aa2.21□□□□□ -2.06
NIFKP3-201ENST00000417799 KRTAP8-1Q8IUC2 63 aa2.2□□□□□ -2.06
NIFKP3-201ENST00000417799 KMT2DO14686 5537 aa2.17□□□□□ -2.06
NIFKP3-201ENST00000417799 MACF1Q9UPN3 7388 aaKnown RBP2.17□□□□□ -2.06
NIFKP3-201ENST00000417799 MUC19Q7Z5P9 8384 aa2.15□□□□□ -2.07
NIFKP3-201ENST00000417799 KRTAP19-5Q3LI72 72 aa2.14□□□□□ -2.07
NIFKP3-201ENST00000417799 KRTAP19-7Q3SYF9 63 aa2.14□□□□□ -2.07
NIFKP3-201ENST00000417799 SPRR2FQ96RM1 72 aa2.14□□□□□ -2.07
NIFKP3-201ENST00000417799 SYNE2Q8WXH0 6885 aaKnown RBP2.12□□□□□ -2.07
NIFKP3-201ENST00000417799 KRTAP12-4P60329 112 aa2.12□□□□□ -2.07
NIFKP3-201ENST00000417799 MT1EP04732 61 aa2.11□□□□□ -2.07
NIFKP3-201ENST00000417799 KTN1-AS1Q86SY8 53 aa2.11□□□□□ -2.07
NIFKP3-201ENST00000417799 KRTAP5-7Q6L8G8 165 aa2.07□□□□□ -2.08
NIFKP3-201ENST00000417799 SPRR2EP22531 72 aa2.05□□□□□ -2.08
NIFKP3-201ENST00000417799 SPRR2BP35325 72 aa2.05□□□□□ -2.08
NIFKP3-201ENST00000417799 SPRR2AP35326 72 aa2.05□□□□□ -2.08
NIFKP3-201ENST00000417799 MT1LQ93083 61 aa2.05□□□□□ -2.08
NIFKP3-201ENST00000417799 KRTAP19-3Q7Z4W3 81 aa2.04□□□□□ -2.08
NIFKP3-201ENST00000417799 MUC12Q9UKN1 5478 aa2.04□□□□□ -2.08
NIFKP3-201ENST00000417799 MT1GP13640 62 aa2.03□□□□□ -2.08
NIFKP3-201ENST00000417799 MDN1Q9NU22 5596 aa2.01□□□□□ -2.09
NIFKP3-201ENST00000417799 SPRR2DP22532 72 aa1.99□□□□□ -2.09
NIFKP3-201ENST00000417799 MT1MQ8N339 61 aa1.99□□□□□ -2.09
NIFKP3-201ENST00000417799 NEBP20929 6669 aa1.99□□□□□ -2.09
NIFKP3-201ENST00000417799 KRTAP2-3P0C7H8 128 aa1.92□□□□□ -2.1
NIFKP3-201ENST00000417799 KRTAP2-4Q9BYR9 128 aa1.92□□□□□ -2.1
NIFKP3-201ENST00000417799 KRTAP20-1Q3LI63 56 aa1.91□□□□□ -2.1
NIFKP3-201ENST00000417799 KRTAP2-1Q9BYU5 128 aa1.87□□□□□ -2.11
NIFKP3-201ENST00000417799 KRTAP21-2Q3LI59 83 aa1.86□□□□□ -2.11
NIFKP3-201ENST00000417799 DSTQ03001 7570 aaKnown RBP1.84□□□□□ -2.12
NIFKP3-201ENST00000417799 MT1AP04731 61 aa1.75□□□□□ -2.13
NIFKP3-201ENST00000417799 MT4P47944 62 aa1.72□□□□□ -2.13
NIFKP3-201ENST00000417799 KRTAP6-1Q3LI64 71 aa1.72□□□□□ -2.13
NIFKP3-201ENST00000417799 SYNE1Q8NF91 8797 aaKnown RBP1.68□□□□□ -2.14
NIFKP3-201ENST00000417799 KRTAP20-2Q3LI61 65 aa1.66□□□□□ -2.14
NIFKP3-201ENST00000417799 HMCN1Q96RW7 5635 aa1.64□□□□□ -2.15
NIFKP3-201ENST00000417799 KRTAP6-2Q3LI66 62 aa1.61□□□□□ -2.15
NIFKP3-201ENST00000417799 AHNAK2Q8IVF2 5795 aa1.48□□□□□ -2.17
NIFKP3-201ENST00000417799 KRTAP5-10Q6L8G5 202 aa1.48□□□□□ -2.17
NIFKP3-201ENST00000417799 GPR98Q8WXG9 6306 aa1.45□□□□□ -2.18
NIFKP3-201ENST00000417799 INE1O15225 51 aa1.34□□□□□ -2.19
NIFKP3-201ENST00000417799 MUC5ACP98088 5654 aa1.32□□□□□ -2.2
NIFKP3-201ENST00000417799 MUC5BQ9HC84 5762 aaPredicted RBP1.22□□□□□ -2.21
NIFKP3-201ENST00000417799 PRM1P04553 51 aa1.17□□□□□ -2.22
NIFKP3-201ENST00000417799 AHNAKQ09666 5890 aaKnown RBP1.16□□□□□ -2.22
NIFKP3-201ENST00000417799 PHGR1C9JFL3 82 aa1□□□□□ -2.25
NIFKP3-201ENST00000417799 MUC16Q8WXI7 14507 aa0.95□□□□□ -2.26
NIFKP3-201ENST00000417799 KRTAP21-1Q3LI58 79 aa0.7□□□□□ -2.3
Retrieved 77 of 20,778 RNA–protein pairs in 7.9 ms