RNA–Protein interactions for RNA: ENST00000417641.6

VRK2-203, Transcript of vaccinia related kinase 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene VRK2, Length 2,381 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-203ENST00000417641 KRTAP10-10P60014 251 aa3.01□□□□□ -1.93
VRK2-203ENST00000417641 M0R2T5 61 aa2.98□□□□□ -1.93
VRK2-203ENST00000417641 KRTAP10-7P60409 375 aaPredicted RBP2.98□□□□□ -1.93
VRK2-203ENST00000417641 RNF213Q63HN8 5207 aa2.93□□□□□ -1.94
VRK2-203ENST00000417641 LCE3CQ5T5A8 94 aa2.9□□□□□ -1.94
VRK2-203ENST00000417641 KRTAP19-5Q3LI72 72 aa2.88□□□□□ -1.95
VRK2-203ENST00000417641 KRTAP9-6A8MVA2 160 aa2.85□□□□□ -1.95
VRK2-203ENST00000417641 KRTAP2-3P0C7H8 128 aa2.83□□□□□ -1.96
VRK2-203ENST00000417641 KRTAP2-4Q9BYR9 128 aa2.83□□□□□ -1.96
VRK2-203ENST00000417641 KRTAP2-1Q9BYU5 128 aa2.83□□□□□ -1.96
VRK2-203ENST00000417641 KRTAP19-7Q3SYF9 63 aa2.74□□□□□ -1.97
VRK2-203ENST00000417641 KMT2DO14686 5537 aa2.68□□□□□ -1.98
VRK2-203ENST00000417641 MT1LQ93083 61 aa2.66□□□□□ -1.98
VRK2-203ENST00000417641 LCE1AQ5T7P2 110 aa2.65□□□□□ -1.98
VRK2-203ENST00000417641 MT1EP04732 61 aa2.63□□□□□ -1.99
VRK2-203ENST00000417641 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.6□□□□□ -1.99
VRK2-203ENST00000417641 USH2AO75445 5202 aa2.6□□□□□ -1.99
VRK2-203ENST00000417641 FSIP2Q5CZC0 6907 aa2.6□□□□□ -1.99
VRK2-203ENST00000417641 MT3P25713 68 aa2.59□□□□□ -1.99
VRK2-203ENST00000417641 HMCN1Q96RW7 5635 aa2.54□□□□□ -2
VRK2-203ENST00000417641 KRTAP4-3Q9BYR4 195 aa2.49□□□□□ -2.01
VRK2-203ENST00000417641 KRTAP12-4P60329 112 aa2.49□□□□□ -2.01
VRK2-203ENST00000417641 MT1GP13640 62 aa2.47□□□□□ -2.01
VRK2-203ENST00000417641 SSPOA2VEC9 5147 aa2.46□□□□□ -2.02
VRK2-203ENST00000417641 KRTAP5-11Q6L8G4 156 aa2.44□□□□□ -2.02
VRK2-203ENST00000417641 MT1MQ8N339 61 aa2.44□□□□□ -2.02
VRK2-203ENST00000417641 KRTAP2-2Q9BYT5 123 aa2.42□□□□□ -2.02
VRK2-203ENST00000417641 CRCT1Q9UGL9 99 aa2.42□□□□□ -2.02
VRK2-203ENST00000417641 KRTAP19-6Q3LI70 58 aa2.41□□□□□ -2.02
VRK2-203ENST00000417641 KRTAP19-3Q7Z4W3 81 aa2.4□□□□□ -2.03
VRK2-203ENST00000417641 MT1AP04731 61 aa2.34□□□□□ -2.03
VRK2-203ENST00000417641 KRTAP5-9P26371 169 aa2.34□□□□□ -2.03
VRK2-203ENST00000417641 FCGBPQ9Y6R7 5405 aaPredicted RBP2.31□□□□□ -2.04
VRK2-203ENST00000417641 MUC12Q9UKN1 5478 aa2.3□□□□□ -2.04
VRK2-203ENST00000417641 KRTAP5-5Q701N2 237 aaPredicted RBP2.29□□□□□ -2.04
VRK2-203ENST00000417641 SYNE1Q8NF91 8797 aaKnown RBP2.27□□□□□ -2.05
VRK2-203ENST00000417641 MACF1Q9UPN3 7388 aaKnown RBP2.26□□□□□ -2.05
VRK2-203ENST00000417641 KRTAP6-1Q3LI64 71 aa2.25□□□□□ -2.05
VRK2-203ENST00000417641 LCE1FQ5T754 118 aa2.25□□□□□ -2.05
VRK2-203ENST00000417641 KRTAP5-1Q6L8H4 278 aa2.25□□□□□ -2.05
VRK2-203ENST00000417641 LCE3DQ9BYE3 92 aa2.24□□□□□ -2.05
VRK2-203ENST00000417641 LCE3EQ5T5B0 92 aa2.24□□□□□ -2.05
VRK2-203ENST00000417641 PRM1P04553 51 aa2.22□□□□□ -2.05
VRK2-203ENST00000417641 SYNE2Q8WXH0 6885 aaKnown RBP2.22□□□□□ -2.05
VRK2-203ENST00000417641 KRTAP4-4Q9BYR3 166 aa2.21□□□□□ -2.06
VRK2-203ENST00000417641 KRTAP5-4Q6L8H1 288 aa2.2□□□□□ -2.06
VRK2-203ENST00000417641 GPR98Q8WXG9 6306 aa2.18□□□□□ -2.06
VRK2-203ENST00000417641 SPRR2FQ96RM1 72 aa2.17□□□□□ -2.06
VRK2-203ENST00000417641 DSTQ03001 7570 aaKnown RBP2.14□□□□□ -2.07
VRK2-203ENST00000417641 KRTAP6-3Q3LI67 103 aa2.13□□□□□ -2.07
VRK2-203ENST00000417641 KRTAP6-2Q3LI66 62 aa2.12□□□□□ -2.07
VRK2-203ENST00000417641 LCE1EQ5T753 118 aa2.1□□□□□ -2.07
VRK2-203ENST00000417641 MDN1Q9NU22 5596 aa2.02□□□□□ -2.09
VRK2-203ENST00000417641 OBSCNQ5VST9 7968 aa1.98□□□□□ -2.09
VRK2-203ENST00000417641 NEBP20929 6669 aa1.97□□□□□ -2.09
VRK2-203ENST00000417641 MUC5BQ9HC84 5762 aaPredicted RBP1.94□□□□□ -2.1
VRK2-203ENST00000417641 SPRR2AP35326 72 aa1.94□□□□□ -2.1
VRK2-203ENST00000417641 KRTAP20-1Q3LI63 56 aa1.93□□□□□ -2.1
VRK2-203ENST00000417641 KRTAP5-2Q701N4 177 aa1.93□□□□□ -2.1
VRK2-203ENST00000417641 SPRR2EP22531 72 aa1.93□□□□□ -2.1
VRK2-203ENST00000417641 SPRR2BP35325 72 aa1.93□□□□□ -2.1
VRK2-203ENST00000417641 SPRR2DP22532 72 aa1.86□□□□□ -2.11
VRK2-203ENST00000417641 KRTAP5-8O75690 187 aa1.83□□□□□ -2.12
VRK2-203ENST00000417641 AHNAKQ09666 5890 aaKnown RBP1.79□□□□□ -2.12
VRK2-203ENST00000417641 MUC5ACP98088 5654 aa1.68□□□□□ -2.14
VRK2-203ENST00000417641 MT4P47944 62 aa1.66□□□□□ -2.14
VRK2-203ENST00000417641 KRTAP20-2Q3LI61 65 aa1.66□□□□□ -2.14
VRK2-203ENST00000417641 KRTAP5-10Q6L8G5 202 aa1.66□□□□□ -2.14
VRK2-203ENST00000417641 MUC19Q7Z5P9 8384 aa1.55□□□□□ -2.16
VRK2-203ENST00000417641 AHNAK2Q8IVF2 5795 aa1.53□□□□□ -2.16
VRK2-203ENST00000417641 LCE1BQ5T7P3 118 aa1.52□□□□□ -2.17
VRK2-203ENST00000417641 LCE1CQ5T751 118 aa1.5□□□□□ -2.17
VRK2-203ENST00000417641 KRTAP21-2Q3LI59 83 aa1.47□□□□□ -2.17
VRK2-203ENST00000417641 KRTAP21-1Q3LI58 79 aa1.47□□□□□ -2.17
VRK2-203ENST00000417641 KRTAP5-7Q6L8G8 165 aa1.42□□□□□ -2.18
VRK2-203ENST00000417641 PHGR1C9JFL3 82 aa1.1□□□□□ -2.23
VRK2-203ENST00000417641 MUC16Q8WXI7 14507 aa0.77□□□□□ -2.29
Retrieved 77 of 20,778 RNA–protein pairs in 11.3 ms