RNA–Protein interactions for RNA: ENST00000416918.5

TRAPPC12-205, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 473 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-205ENST00000416918 KMT2DO14686 5537 aa3.75□□□□□ -1.81
TRAPPC12-205ENST00000416918 SPRR2FQ96RM1 72 aa3.72□□□□□ -1.81
TRAPPC12-205ENST00000416918 LCE5AQ5TCM9 118 aa3.7□□□□□ -1.82
TRAPPC12-205ENST00000416918 MT1MQ8N339 61 aa3.7□□□□□ -1.82
TRAPPC12-205ENST00000416918 KRTAP5-9P26371 169 aa3.69□□□□□ -1.82
TRAPPC12-205ENST00000416918 KRTAP9-6A8MVA2 160 aa3.66□□□□□ -1.82
TRAPPC12-205ENST00000416918 KRTAP4-7Q9BYR0 210 aa3.66□□□□□ -1.82
TRAPPC12-205ENST00000416918 KRTAP9-6A0A140TA67 174 aa3.63□□□□□ -1.83
TRAPPC12-205ENST00000416918 INE1O15225 51 aa3.61□□□□□ -1.83
TRAPPC12-205ENST00000416918 LCE1AQ5T7P2 110 aa3.6□□□□□ -1.83
TRAPPC12-205ENST00000416918 KRTAP2-3P0C7H8 128 aa3.59□□□□□ -1.83
TRAPPC12-205ENST00000416918 KRTAP2-4Q9BYR9 128 aa3.59□□□□□ -1.83
TRAPPC12-205ENST00000416918 KRTAP2-1Q9BYU5 128 aa3.59□□□□□ -1.83
TRAPPC12-205ENST00000416918 MACF1Q9UPN3 7388 aaKnown RBP3.58□□□□□ -1.84
TRAPPC12-205ENST00000416918 KRTAP6-3Q3LI67 103 aa3.57□□□□□ -1.84
TRAPPC12-205ENST00000416918 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.5□□□□□ -1.85
TRAPPC12-205ENST00000416918 SPRR2EP22531 72 aa3.5□□□□□ -1.85
TRAPPC12-205ENST00000416918 SPRR2BP35325 72 aa3.5□□□□□ -1.85
TRAPPC12-205ENST00000416918 SPRR2AP35326 72 aa3.5□□□□□ -1.85
TRAPPC12-205ENST00000416918 KRTAP4-3Q9BYR4 195 aa3.5□□□□□ -1.85
TRAPPC12-205ENST00000416918 MUC12Q9UKN1 5478 aa3.5□□□□□ -1.85
TRAPPC12-205ENST00000416918 LOC100996750A0A140TA64 210 aa3.48□□□□□ -1.85
TRAPPC12-205ENST00000416918 KRTAP4-6Q9BYQ5 205 aa3.48□□□□□ -1.85
TRAPPC12-205ENST00000416918 SYNE2Q8WXH0 6885 aaKnown RBP3.4□□□□□ -1.86
TRAPPC12-205ENST00000416918 SPRR2DP22532 72 aa3.38□□□□□ -1.87
TRAPPC12-205ENST00000416918 MT1AP04731 61 aa3.36□□□□□ -1.87
TRAPPC12-205ENST00000416918 KRTAP5-5Q701N2 237 aaPredicted RBP3.32□□□□□ -1.88
TRAPPC12-205ENST00000416918 MDN1Q9NU22 5596 aa3.31□□□□□ -1.88
TRAPPC12-205ENST00000416918 KRTAP9-7A8MTY7 169 aa3.31□□□□□ -1.88
TRAPPC12-205ENST00000416918 KRTAP6-1Q3LI64 71 aa3.23□□□□□ -1.89
TRAPPC12-205ENST00000416918 LCE3BQ5TA77 95 aa3.23□□□□□ -1.89
TRAPPC12-205ENST00000416918 DSTQ03001 7570 aaKnown RBP3.22□□□□□ -1.89
TRAPPC12-205ENST00000416918 NEBP20929 6669 aa3.19□□□□□ -1.9
TRAPPC12-205ENST00000416918 KRTAP9-4Q9BYQ2 154 aa3.17□□□□□ -1.9
TRAPPC12-205ENST00000416918 KRTAP12-4P60329 112 aa3.15□□□□□ -1.91
TRAPPC12-205ENST00000416918 KRTAP5-4Q6L8H1 288 aa3.13□□□□□ -1.91
TRAPPC12-205ENST00000416918 LCE4AQ5TA78 99 aa3.1□□□□□ -1.91
TRAPPC12-205ENST00000416918 MT3P25713 68 aa3.08□□□□□ -1.92
TRAPPC12-205ENST00000416918 LCE3DQ9BYE3 92 aa3.06□□□□□ -1.92
TRAPPC12-205ENST00000416918 SYNE1Q8NF91 8797 aaKnown RBP3.05□□□□□ -1.92
TRAPPC12-205ENST00000416918 KRTAP2-2Q9BYT5 123 aa3.04□□□□□ -1.92
TRAPPC12-205ENST00000416918 LCE3EQ5T5B0 92 aa3.01□□□□□ -1.93
TRAPPC12-205ENST00000416918 KRTAP9-9Q9BYP9 154 aa2.97□□□□□ -1.93
TRAPPC12-205ENST00000416918 KRTAP6-2Q3LI66 62 aa2.96□□□□□ -1.94
TRAPPC12-205ENST00000416918 KRTAP20-1Q3LI63 56 aa2.95□□□□□ -1.94
TRAPPC12-205ENST00000416918 KRTAP4-12Q9BQ66 201 aa2.95□□□□□ -1.94
TRAPPC12-205ENST00000416918 KRTAP4-9Q9BYQ8 210 aa2.94□□□□□ -1.94
TRAPPC12-205ENST00000416918 KRTAP20-2Q3LI61 65 aa2.88□□□□□ -1.95
TRAPPC12-205ENST00000416918 KRTAP5-2Q701N4 177 aa2.86□□□□□ -1.95
TRAPPC12-205ENST00000416918 MT4P47944 62 aa2.85□□□□□ -1.95
TRAPPC12-205ENST00000416918 LCE1DQ5T752 114 aa2.8□□□□□ -1.96
TRAPPC12-205ENST00000416918 KRTAP5-3Q6L8H2 238 aa2.77□□□□□ -1.97
TRAPPC12-205ENST00000416918 HMCN1Q96RW7 5635 aa2.73□□□□□ -1.97
TRAPPC12-205ENST00000416918 KRTAP4-2Q9BYR5 136 aa2.72□□□□□ -1.97
TRAPPC12-205ENST00000416918 LCE1EQ5T753 118 aa2.68□□□□□ -1.98
TRAPPC12-205ENST00000416918 OBSCNQ5VST9 7968 aa2.65□□□□□ -1.99
TRAPPC12-205ENST00000416918 PRM1P04553 51 aa2.62□□□□□ -1.99
TRAPPC12-205ENST00000416918 KRTAP4-11Q9BYQ6 195 aa2.61□□□□□ -1.99
TRAPPC12-205ENST00000416918 LCE1CQ5T751 118 aa2.46□□□□□ -2.02
TRAPPC12-205ENST00000416918 LCE1BQ5T7P3 118 aa2.46□□□□□ -2.02
TRAPPC12-205ENST00000416918 KRTAP5-10Q6L8G5 202 aa2.44□□□□□ -2.02
TRAPPC12-205ENST00000416918 KRTAP5-1Q6L8H4 278 aa2.41□□□□□ -2.02
TRAPPC12-205ENST00000416918 KRTAP5-8O75690 187 aa2.4□□□□□ -2.03
TRAPPC12-205ENST00000416918 KRTAP5-7Q6L8G8 165 aa2.4□□□□□ -2.03
TRAPPC12-205ENST00000416918 AHNAK2Q8IVF2 5795 aa2.34□□□□□ -2.03
TRAPPC12-205ENST00000416918 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.33□□□□□ -2.04
TRAPPC12-205ENST00000416918 MUC5ACP98088 5654 aa2.33□□□□□ -2.04
TRAPPC12-205ENST00000416918 GPR98Q8WXG9 6306 aa2.19□□□□□ -2.06
TRAPPC12-205ENST00000416918 KRTAP5-11Q6L8G4 156 aa2.14□□□□□ -2.07
TRAPPC12-205ENST00000416918 KRTAP21-2Q3LI59 83 aa2.13□□□□□ -2.07
TRAPPC12-205ENST00000416918 MUC5BQ9HC84 5762 aaPredicted RBP2□□□□□ -2.09
TRAPPC12-205ENST00000416918 LCE1FQ5T754 118 aa1.97□□□□□ -2.09
TRAPPC12-205ENST00000416918 PHGR1C9JFL3 82 aa1.82□□□□□ -2.12
TRAPPC12-205ENST00000416918 AHNAKQ09666 5890 aaKnown RBP1.78□□□□□ -2.13
TRAPPC12-205ENST00000416918 KRTAP4-4Q9BYR3 166 aa1.77□□□□□ -2.13
TRAPPC12-205ENST00000416918 KRTAP21-1Q3LI58 79 aa1.68□□□□□ -2.14
TRAPPC12-205ENST00000416918 MUC19Q7Z5P9 8384 aa1.54□□□□□ -2.16
TRAPPC12-205ENST00000416918 MUC16Q8WXI7 14507 aa1.2□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 6 ms