RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 CRCT1Q9UGL9 99 aa5.02□□□□□ -1.61
NCKIPSD-204ENST00000416649 KRTAP19-6Q3LI70 58 aa4.99□□□□□ -1.61
NCKIPSD-204ENST00000416649 MACF1Q9UPN3 7388 aaKnown RBP4.95□□□□□ -1.62
NCKIPSD-204ENST00000416649 KRTAP19-7Q3SYF9 63 aa4.94□□□□□ -1.62
NCKIPSD-204ENST00000416649 SYNE2Q8WXH0 6885 aaKnown RBP4.94□□□□□ -1.62
NCKIPSD-204ENST00000416649 LOC100996750A0A140TA64 210 aa4.93□□□□□ -1.62
NCKIPSD-204ENST00000416649 KRTAP4-3Q9BYR4 195 aa4.93□□□□□ -1.62
NCKIPSD-204ENST00000416649 LCE2DQ5TA82 110 aaPredicted RBP4.87□□□□□ -1.63
NCKIPSD-204ENST00000416649 KRTAP12-4P60329 112 aa4.86□□□□□ -1.63
NCKIPSD-204ENST00000416649 KRTAP9-2Q9BYQ4 174 aa4.85□□□□□ -1.63
NCKIPSD-204ENST00000416649 MT1LQ93083 61 aa4.83□□□□□ -1.64
NCKIPSD-204ENST00000416649 MT1EP04732 61 aa4.81□□□□□ -1.64
NCKIPSD-204ENST00000416649 MT1GP13640 62 aa4.76□□□□□ -1.65
NCKIPSD-204ENST00000416649 SPRR2FQ96RM1 72 aa4.73□□□□□ -1.65
NCKIPSD-204ENST00000416649 MDN1Q9NU22 5596 aa4.73□□□□□ -1.65
NCKIPSD-204ENST00000416649 KRTAP19-4Q3LI73 84 aa4.63□□□□□ -1.67
NCKIPSD-204ENST00000416649 KRTAP4-9Q9BYQ8 210 aa4.61□□□□□ -1.67
NCKIPSD-204ENST00000416649 KRTAP19-3Q7Z4W3 81 aa4.57□□□□□ -1.68
NCKIPSD-204ENST00000416649 MT1MQ8N339 61 aa4.53□□□□□ -1.68
NCKIPSD-204ENST00000416649 LCE3BQ5TA77 95 aa4.52□□□□□ -1.69
NCKIPSD-204ENST00000416649 LCE5AQ5TCM9 118 aa4.42□□□□□ -1.7
NCKIPSD-204ENST00000416649 KRTAP9-7A8MTY7 169 aa4.39□□□□□ -1.71
NCKIPSD-204ENST00000416649 PRM1P04553 51 aa4.37□□□□□ -1.71
NCKIPSD-204ENST00000416649 SPRR2EP22531 72 aa4.37□□□□□ -1.71
NCKIPSD-204ENST00000416649 SPRR2BP35325 72 aa4.37□□□□□ -1.71
NCKIPSD-204ENST00000416649 SPRR2AP35326 72 aa4.37□□□□□ -1.71
NCKIPSD-204ENST00000416649 LCE1AQ5T7P2 110 aa4.35□□□□□ -1.71
NCKIPSD-204ENST00000416649 KRTAP9-6A0A140TA67 174 aa4.3□□□□□ -1.72
NCKIPSD-204ENST00000416649 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.3□□□□□ -1.72
NCKIPSD-204ENST00000416649 LCE3DQ9BYE3 92 aa4.29□□□□□ -1.72
NCKIPSD-204ENST00000416649 KRTAP5-9P26371 169 aa4.28□□□□□ -1.72
NCKIPSD-204ENST00000416649 LCE3EQ5T5B0 92 aa4.26□□□□□ -1.73
NCKIPSD-204ENST00000416649 KRTAP5-5Q701N2 237 aaPredicted RBP4.22□□□□□ -1.73
NCKIPSD-204ENST00000416649 MT1AP04731 61 aa4.19□□□□□ -1.74
NCKIPSD-204ENST00000416649 KRTAP6-1Q3LI64 71 aa4.19□□□□□ -1.74
NCKIPSD-204ENST00000416649 SPRR2DP22532 72 aa4.17□□□□□ -1.74
NCKIPSD-204ENST00000416649 KRTAP6-3Q3LI67 103 aa4.11□□□□□ -1.75
NCKIPSD-204ENST00000416649 KRTAP6-2Q3LI66 62 aa4.05□□□□□ -1.76
NCKIPSD-204ENST00000416649 NEBP20929 6669 aa4.01□□□□□ -1.77
NCKIPSD-204ENST00000416649 KRTAP2-2Q9BYT5 123 aa3.84□□□□□ -1.79
NCKIPSD-204ENST00000416649 MT4P47944 62 aa3.8□□□□□ -1.8
NCKIPSD-204ENST00000416649 KRTAP9-4Q9BYQ2 154 aa3.76□□□□□ -1.81
NCKIPSD-204ENST00000416649 KRTAP4-6Q9BYQ5 205 aa3.73□□□□□ -1.81
NCKIPSD-204ENST00000416649 LCE1EQ5T753 118 aa3.72□□□□□ -1.81
NCKIPSD-204ENST00000416649 HMCN1Q96RW7 5635 aa3.64□□□□□ -1.83
NCKIPSD-204ENST00000416649 MT3P25713 68 aa3.6□□□□□ -1.83
NCKIPSD-204ENST00000416649 KRTAP5-4Q6L8H1 288 aa3.6□□□□□ -1.83
NCKIPSD-204ENST00000416649 LCE1DQ5T752 114 aa3.56□□□□□ -1.84
NCKIPSD-204ENST00000416649 KRTAP20-1Q3LI63 56 aa3.52□□□□□ -1.85
NCKIPSD-204ENST00000416649 KRTAP20-2Q3LI61 65 aa3.5□□□□□ -1.85
NCKIPSD-204ENST00000416649 LCE4AQ5TA78 99 aa3.46□□□□□ -1.86
NCKIPSD-204ENST00000416649 MUC19Q7Z5P9 8384 aa3.34□□□□□ -1.88
NCKIPSD-204ENST00000416649 KRTAP4-11Q9BYQ6 195 aa3.31□□□□□ -1.88
NCKIPSD-204ENST00000416649 KRTAP5-2Q701N4 177 aa3.29□□□□□ -1.88
NCKIPSD-204ENST00000416649 KRTAP5-3Q6L8H2 238 aa3.28□□□□□ -1.88
NCKIPSD-204ENST00000416649 MUC5ACP98088 5654 aa3.28□□□□□ -1.88
NCKIPSD-204ENST00000416649 LCE1BQ5T7P3 118 aa3.22□□□□□ -1.89
NCKIPSD-204ENST00000416649 KRTAP5-10Q6L8G5 202 aa3.01□□□□□ -1.93
NCKIPSD-204ENST00000416649 AHNAK2Q8IVF2 5795 aa2.98□□□□□ -1.93
NCKIPSD-204ENST00000416649 KRTAP5-1Q6L8H4 278 aa2.92□□□□□ -1.94
NCKIPSD-204ENST00000416649 LCE1FQ5T754 118 aa2.91□□□□□ -1.94
NCKIPSD-204ENST00000416649 KRTAP4-2Q9BYR5 136 aa2.87□□□□□ -1.95
NCKIPSD-204ENST00000416649 KRTAP4-4Q9BYR3 166 aa2.85□□□□□ -1.95
NCKIPSD-204ENST00000416649 KRTAP5-8O75690 187 aa2.84□□□□□ -1.95
NCKIPSD-204ENST00000416649 MUC5BQ9HC84 5762 aaPredicted RBP2.83□□□□□ -1.96
NCKIPSD-204ENST00000416649 LCE1CQ5T751 118 aa2.77□□□□□ -1.97
NCKIPSD-204ENST00000416649 GPR98Q8WXG9 6306 aa2.75□□□□□ -1.97
NCKIPSD-204ENST00000416649 KRTAP21-1Q3LI58 79 aa2.66□□□□□ -1.98
NCKIPSD-204ENST00000416649 KRTAP4-12Q9BQ66 201 aa2.62□□□□□ -1.99
NCKIPSD-204ENST00000416649 KRTAP21-2Q3LI59 83 aa2.59□□□□□ -1.99
NCKIPSD-204ENST00000416649 KRTAP5-7Q6L8G8 165 aa2.57□□□□□ -2
NCKIPSD-204ENST00000416649 KRTAP9-9Q9BYP9 154 aa2.52□□□□□ -2.01
NCKIPSD-204ENST00000416649 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.51□□□□□ -2.01
NCKIPSD-204ENST00000416649 KRTAP5-11Q6L8G4 156 aa2.4□□□□□ -2.02
NCKIPSD-204ENST00000416649 AHNAKQ09666 5890 aaKnown RBP2.21□□□□□ -2.06
NCKIPSD-204ENST00000416649 PHGR1C9JFL3 82 aa2.11□□□□□ -2.07
NCKIPSD-204ENST00000416649 MUC16Q8WXI7 14507 aa1.38□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 120.4 ms