RNA–Protein interactions for RNA: ENST00000416215.6

PTPN6-203, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 2

Gene PTPN6, Length 2,412 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-203ENST00000416215 MACF1Q9UPN3 7388 aaKnown RBP4.69□□□□□ -1.66
PTPN6-203ENST00000416215 KRTAP9-6A8MVA2 160 aa4.65□□□□□ -1.66
PTPN6-203ENST00000416215 KRTAP19-4Q3LI73 84 aa4.62□□□□□ -1.67
PTPN6-203ENST00000416215 CRCT1Q9UGL9 99 aa4.61□□□□□ -1.67
PTPN6-203ENST00000416215 SPRR2FQ96RM1 72 aa4.58□□□□□ -1.68
PTPN6-203ENST00000416215 KRTAP19-3Q7Z4W3 81 aa4.57□□□□□ -1.68
PTPN6-203ENST00000416215 SYNE2Q8WXH0 6885 aaKnown RBP4.56□□□□□ -1.68
PTPN6-203ENST00000416215 KRTAP4-3Q9BYR4 195 aa4.55□□□□□ -1.68
PTPN6-203ENST00000416215 KRTAP9-6A0A140TA67 174 aa4.54□□□□□ -1.68
PTPN6-203ENST00000416215 MT1GP13640 62 aa4.53□□□□□ -1.68
PTPN6-203ENST00000416215 MT1MQ8N339 61 aa4.52□□□□□ -1.69
PTPN6-203ENST00000416215 LCE5AQ5TCM9 118 aa4.46□□□□□ -1.69
PTPN6-203ENST00000416215 DSTQ03001 7570 aaKnown RBP4.46□□□□□ -1.7
PTPN6-203ENST00000416215 LOC100996750A0A140TA64 210 aa4.45□□□□□ -1.7
PTPN6-203ENST00000416215 MDN1Q9NU22 5596 aa4.43□□□□□ -1.7
PTPN6-203ENST00000416215 KRTAP5-9P26371 169 aa4.38□□□□□ -1.71
PTPN6-203ENST00000416215 LCE1AQ5T7P2 110 aa4.33□□□□□ -1.72
PTPN6-203ENST00000416215 KRTAP2-3P0C7H8 128 aa4.32□□□□□ -1.72
PTPN6-203ENST00000416215 KRTAP2-4Q9BYR9 128 aa4.32□□□□□ -1.72
PTPN6-203ENST00000416215 KRTAP2-1Q9BYU5 128 aa4.32□□□□□ -1.72
PTPN6-203ENST00000416215 SPRR2EP22531 72 aa4.26□□□□□ -1.73
PTPN6-203ENST00000416215 SPRR2BP35325 72 aa4.26□□□□□ -1.73
PTPN6-203ENST00000416215 SPRR2AP35326 72 aa4.26□□□□□ -1.73
PTPN6-203ENST00000416215 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.26□□□□□ -1.73
PTPN6-203ENST00000416215 KRTAP6-3Q3LI67 103 aa4.19□□□□□ -1.74
PTPN6-203ENST00000416215 SPRR2DP22532 72 aa4.09□□□□□ -1.76
PTPN6-203ENST00000416215 KRTAP6-1Q3LI64 71 aa4.04□□□□□ -1.76
PTPN6-203ENST00000416215 KRTAP9-7A8MTY7 169 aa4.03□□□□□ -1.76
PTPN6-203ENST00000416215 KRTAP5-5Q701N2 237 aaPredicted RBP4.03□□□□□ -1.76
PTPN6-203ENST00000416215 MT1AP04731 61 aa4□□□□□ -1.77
PTPN6-203ENST00000416215 LCE3BQ5TA77 95 aa4□□□□□ -1.77
PTPN6-203ENST00000416215 SYNE1Q8NF91 8797 aaKnown RBP3.99□□□□□ -1.77
PTPN6-203ENST00000416215 NEBP20929 6669 aa3.92□□□□□ -1.78
PTPN6-203ENST00000416215 KRTAP4-9Q9BYQ8 210 aa3.87□□□□□ -1.79
PTPN6-203ENST00000416215 KRTAP2-2Q9BYT5 123 aa3.85□□□□□ -1.79
PTPN6-203ENST00000416215 KRTAP9-4Q9BYQ2 154 aa3.8□□□□□ -1.8
PTPN6-203ENST00000416215 KRTAP12-4P60329 112 aa3.76□□□□□ -1.81
PTPN6-203ENST00000416215 KRTAP5-4Q6L8H1 288 aa3.72□□□□□ -1.81
PTPN6-203ENST00000416215 KRTAP6-2Q3LI66 62 aa3.68□□□□□ -1.82
PTPN6-203ENST00000416215 LCE3DQ9BYE3 92 aa3.66□□□□□ -1.82
PTPN6-203ENST00000416215 OBSCNQ5VST9 7968 aa3.62□□□□□ -1.83
PTPN6-203ENST00000416215 KRTAP4-6Q9BYQ5 205 aa3.62□□□□□ -1.83
PTPN6-203ENST00000416215 MT3P25713 68 aa3.61□□□□□ -1.83
PTPN6-203ENST00000416215 MT4P47944 62 aa3.61□□□□□ -1.83
PTPN6-203ENST00000416215 LCE1FQ5T754 118 aa3.59□□□□□ -1.84
PTPN6-203ENST00000416215 LCE3EQ5T5B0 92 aa3.58□□□□□ -1.84
PTPN6-203ENST00000416215 KRTAP20-1Q3LI63 56 aa3.56□□□□□ -1.84
PTPN6-203ENST00000416215 LCE4AQ5TA78 99 aa3.56□□□□□ -1.84
PTPN6-203ENST00000416215 KRTAP20-2Q3LI61 65 aa3.5□□□□□ -1.85
PTPN6-203ENST00000416215 HMCN1Q96RW7 5635 aa3.49□□□□□ -1.85
PTPN6-203ENST00000416215 LCE1DQ5T752 114 aa3.47□□□□□ -1.85
PTPN6-203ENST00000416215 KRTAP9-9Q9BYP9 154 aa3.42□□□□□ -1.86
PTPN6-203ENST00000416215 KRTAP5-2Q701N4 177 aa3.41□□□□□ -1.86
PTPN6-203ENST00000416215 LCE1EQ5T753 118 aa3.39□□□□□ -1.87
PTPN6-203ENST00000416215 KRTAP5-3Q6L8H2 238 aa3.35□□□□□ -1.87
PTPN6-203ENST00000416215 PRM1P04553 51 aa3.27□□□□□ -1.89
PTPN6-203ENST00000416215 MUC5ACP98088 5654 aa3.01□□□□□ -1.93
PTPN6-203ENST00000416215 GPR98Q8WXG9 6306 aa2.98□□□□□ -1.93
PTPN6-203ENST00000416215 LCE1BQ5T7P3 118 aa2.98□□□□□ -1.93
PTPN6-203ENST00000416215 KRTAP4-11Q9BYQ6 195 aa2.98□□□□□ -1.93
PTPN6-203ENST00000416215 KRTAP5-1Q6L8H4 278 aa2.95□□□□□ -1.94
PTPN6-203ENST00000416215 AHNAK2Q8IVF2 5795 aa2.92□□□□□ -1.94
PTPN6-203ENST00000416215 KRTAP5-10Q6L8G5 202 aa2.89□□□□□ -1.95
PTPN6-203ENST00000416215 KRTAP4-2Q9BYR5 136 aa2.89□□□□□ -1.95
PTPN6-203ENST00000416215 KRTAP5-8O75690 187 aa2.87□□□□□ -1.95
PTPN6-203ENST00000416215 LCE1CQ5T751 118 aa2.87□□□□□ -1.95
PTPN6-203ENST00000416215 KRTAP5-7Q6L8G8 165 aa2.82□□□□□ -1.96
PTPN6-203ENST00000416215 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.67□□□□□ -1.98
PTPN6-203ENST00000416215 KRTAP21-2Q3LI59 83 aa2.62□□□□□ -1.99
PTPN6-203ENST00000416215 MUC5BQ9HC84 5762 aaPredicted RBP2.56□□□□□ -2
PTPN6-203ENST00000416215 KRTAP5-11Q6L8G4 156 aa2.49□□□□□ -2.01
PTPN6-203ENST00000416215 AHNAKQ09666 5890 aaKnown RBP2.46□□□□□ -2.02
PTPN6-203ENST00000416215 KRTAP4-12Q9BQ66 201 aa2.42□□□□□ -2.02
PTPN6-203ENST00000416215 KRTAP4-4Q9BYR3 166 aa2.41□□□□□ -2.02
PTPN6-203ENST00000416215 MUC19Q7Z5P9 8384 aa2.29□□□□□ -2.04
PTPN6-203ENST00000416215 PHGR1C9JFL3 82 aa2.16□□□□□ -2.06
PTPN6-203ENST00000416215 KRTAP21-1Q3LI58 79 aa2.06□□□□□ -2.08
PTPN6-203ENST00000416215 MUC16Q8WXI7 14507 aa1.41□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 673 ms