RNA–Protein interactions for RNA: ENST00000415993.5

HDAC10-203, Transcript of histone deacetylase 10, humanhuman

TSL 1 (best)

Gene HDAC10, Length 2,375 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC10-203ENST00000415993 KRTAP4-7Q9BYR0 210 aa6.02□□□□□ -1.45
HDAC10-203ENST00000415993 MUC12Q9UKN1 5478 aa6.01□□□□□ -1.45
HDAC10-203ENST00000415993 INE1O15225 51 aa6□□□□□ -1.45
HDAC10-203ENST00000415993 SYNE2Q8WXH0 6885 aaKnown RBP5.94□□□□□ -1.46
HDAC10-203ENST00000415993 KRTAP9-6A8MVA2 160 aa5.92□□□□□ -1.46
HDAC10-203ENST00000415993 KRTAP19-3Q7Z4W3 81 aa5.91□□□□□ -1.46
HDAC10-203ENST00000415993 SPRR2FQ96RM1 72 aa5.9□□□□□ -1.46
HDAC10-203ENST00000415993 MT1GP13640 62 aa5.86□□□□□ -1.47
HDAC10-203ENST00000415993 MT1MQ8N339 61 aa5.82□□□□□ -1.48
HDAC10-203ENST00000415993 LCE5AQ5TCM9 118 aa5.8□□□□□ -1.48
HDAC10-203ENST00000415993 KRTAP5-9P26371 169 aa5.78□□□□□ -1.48
HDAC10-203ENST00000415993 KRTAP4-3Q9BYR4 195 aa5.78□□□□□ -1.48
HDAC10-203ENST00000415993 MDN1Q9NU22 5596 aa5.71□□□□□ -1.5
HDAC10-203ENST00000415993 LOC100996750A0A140TA64 210 aa5.64□□□□□ -1.51
HDAC10-203ENST00000415993 LCE1AQ5T7P2 110 aa5.64□□□□□ -1.51
HDAC10-203ENST00000415993 KRTAP9-6A0A140TA67 174 aa5.63□□□□□ -1.51
HDAC10-203ENST00000415993 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.61□□□□□ -1.51
HDAC10-203ENST00000415993 DSTQ03001 7570 aaKnown RBP5.61□□□□□ -1.51
HDAC10-203ENST00000415993 KRTAP6-3Q3LI67 103 aa5.53□□□□□ -1.52
HDAC10-203ENST00000415993 KRTAP2-3P0C7H8 128 aa5.52□□□□□ -1.53
HDAC10-203ENST00000415993 KRTAP2-4Q9BYR9 128 aa5.52□□□□□ -1.53
HDAC10-203ENST00000415993 KRTAP2-1Q9BYU5 128 aa5.52□□□□□ -1.53
HDAC10-203ENST00000415993 SPRR2EP22531 72 aa5.52□□□□□ -1.53
HDAC10-203ENST00000415993 SPRR2BP35325 72 aa5.52□□□□□ -1.53
HDAC10-203ENST00000415993 SPRR2AP35326 72 aa5.52□□□□□ -1.53
HDAC10-203ENST00000415993 SPRR2DP22532 72 aa5.3□□□□□ -1.56
HDAC10-203ENST00000415993 KRTAP5-5Q701N2 237 aaPredicted RBP5.26□□□□□ -1.57
HDAC10-203ENST00000415993 NEBP20929 6669 aa5.23□□□□□ -1.57
HDAC10-203ENST00000415993 KRTAP9-7A8MTY7 169 aa5.2□□□□□ -1.58
HDAC10-203ENST00000415993 KRTAP6-1Q3LI64 71 aa5.17□□□□□ -1.58
HDAC10-203ENST00000415993 MT1AP04731 61 aa5.16□□□□□ -1.58
HDAC10-203ENST00000415993 LCE3BQ5TA77 95 aa5.08□□□□□ -1.6
HDAC10-203ENST00000415993 SYNE1Q8NF91 8797 aaKnown RBP5.03□□□□□ -1.6
HDAC10-203ENST00000415993 KRTAP9-4Q9BYQ2 154 aa4.9□□□□□ -1.62
HDAC10-203ENST00000415993 KRTAP5-4Q6L8H1 288 aa4.89□□□□□ -1.63
HDAC10-203ENST00000415993 KRTAP4-9Q9BYQ8 210 aa4.86□□□□□ -1.63
HDAC10-203ENST00000415993 KRTAP12-4P60329 112 aa4.84□□□□□ -1.63
HDAC10-203ENST00000415993 KRTAP6-2Q3LI66 62 aa4.71□□□□□ -1.65
HDAC10-203ENST00000415993 KRTAP2-2Q9BYT5 123 aa4.69□□□□□ -1.66
HDAC10-203ENST00000415993 LCE4AQ5TA78 99 aa4.68□□□□□ -1.66
HDAC10-203ENST00000415993 KRTAP4-6Q9BYQ5 205 aa4.67□□□□□ -1.66
HDAC10-203ENST00000415993 MT3P25713 68 aa4.65□□□□□ -1.66
HDAC10-203ENST00000415993 LCE3DQ9BYE3 92 aa4.65□□□□□ -1.66
HDAC10-203ENST00000415993 MT4P47944 62 aa4.63□□□□□ -1.67
HDAC10-203ENST00000415993 KRTAP20-1Q3LI63 56 aa4.6□□□□□ -1.67
HDAC10-203ENST00000415993 KRTAP20-2Q3LI61 65 aa4.56□□□□□ -1.68
HDAC10-203ENST00000415993 HMCN1Q96RW7 5635 aa4.56□□□□□ -1.68
HDAC10-203ENST00000415993 LCE3EQ5T5B0 92 aa4.54□□□□□ -1.68
HDAC10-203ENST00000415993 LCE1DQ5T752 114 aa4.51□□□□□ -1.69
HDAC10-203ENST00000415993 KRTAP5-2Q701N4 177 aa4.48□□□□□ -1.69
HDAC10-203ENST00000415993 OBSCNQ5VST9 7968 aa4.45□□□□□ -1.7
HDAC10-203ENST00000415993 KRTAP5-3Q6L8H2 238 aa4.4□□□□□ -1.71
HDAC10-203ENST00000415993 PRM1P04553 51 aa4.29□□□□□ -1.72
HDAC10-203ENST00000415993 LCE1EQ5T753 118 aa4□□□□□ -1.77
HDAC10-203ENST00000415993 KRTAP4-11Q9BYQ6 195 aa3.89□□□□□ -1.79
HDAC10-203ENST00000415993 AHNAK2Q8IVF2 5795 aa3.87□□□□□ -1.79
HDAC10-203ENST00000415993 KRTAP5-1Q6L8H4 278 aa3.85□□□□□ -1.79
HDAC10-203ENST00000415993 MUC5ACP98088 5654 aa3.85□□□□□ -1.79
HDAC10-203ENST00000415993 KRTAP5-10Q6L8G5 202 aa3.8□□□□□ -1.8
HDAC10-203ENST00000415993 LCE1BQ5T7P3 118 aa3.77□□□□□ -1.81
HDAC10-203ENST00000415993 KRTAP5-8O75690 187 aa3.76□□□□□ -1.81
HDAC10-203ENST00000415993 KRTAP4-2Q9BYR5 136 aa3.76□□□□□ -1.81
HDAC10-203ENST00000415993 LCE1CQ5T751 118 aa3.75□□□□□ -1.81
HDAC10-203ENST00000415993 KRTAP5-7Q6L8G8 165 aa3.67□□□□□ -1.82
HDAC10-203ENST00000415993 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.53□□□□□ -1.84
HDAC10-203ENST00000415993 GPR98Q8WXG9 6306 aa3.45□□□□□ -1.86
HDAC10-203ENST00000415993 KRTAP21-2Q3LI59 83 aa3.39□□□□□ -1.87
HDAC10-203ENST00000415993 MUC5BQ9HC84 5762 aaPredicted RBP3.29□□□□□ -1.88
HDAC10-203ENST00000415993 KRTAP5-11Q6L8G4 156 aa3.27□□□□□ -1.89
HDAC10-203ENST00000415993 KRTAP9-9Q9BYP9 154 aa3.27□□□□□ -1.89
HDAC10-203ENST00000415993 KRTAP4-12Q9BQ66 201 aa3.07□□□□□ -1.92
HDAC10-203ENST00000415993 KRTAP4-4Q9BYR3 166 aa3.01□□□□□ -1.93
HDAC10-203ENST00000415993 LCE1FQ5T754 118 aa2.86□□□□□ -1.95
HDAC10-203ENST00000415993 PHGR1C9JFL3 82 aa2.82□□□□□ -1.96
HDAC10-203ENST00000415993 AHNAKQ09666 5890 aaKnown RBP2.81□□□□□ -1.96
HDAC10-203ENST00000415993 KRTAP21-1Q3LI58 79 aa2.74□□□□□ -1.97
HDAC10-203ENST00000415993 MUC19Q7Z5P9 8384 aa2.69□□□□□ -1.98
HDAC10-203ENST00000415993 MUC16Q8WXI7 14507 aa1.81□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 503.6 ms