RNA–Protein interactions for RNA: ENST00000415409.5

HDAC8-211, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 913 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-211ENST00000415409 PRO2289Q9P1D8 64 aa2.91□□□□□ -1.94
HDAC8-211ENST00000415409 KRTAP9-6A8MVA2 160 aa2.89□□□□□ -1.95
HDAC8-211ENST00000415409 KRTAP5-4Q6L8H1 288 aa2.88□□□□□ -1.95
HDAC8-211ENST00000415409 KRTAP4-4Q9BYR3 166 aa2.88□□□□□ -1.95
HDAC8-211ENST00000415409 KRTAP10-12P60413 245 aa2.86□□□□□ -1.95
HDAC8-211ENST00000415409 KRTAP19-8Q3LI54 63 aa2.86□□□□□ -1.95
HDAC8-211ENST00000415409 KRTAP5-9P26371 169 aa2.84□□□□□ -1.95
HDAC8-211ENST00000415409 FSIP2Q5CZC0 6907 aa2.83□□□□□ -1.96
HDAC8-211ENST00000415409 C10orf95Q9H7T3 257 aa2.82□□□□□ -1.96
HDAC8-211ENST00000415409 MT1BP07438 61 aa2.8□□□□□ -1.96
HDAC8-211ENST00000415409 LCE1FQ5T754 118 aa2.8□□□□□ -1.96
HDAC8-211ENST00000415409 TNP1P09430 55 aa2.77□□□□□ -1.97
HDAC8-211ENST00000415409 INE1O15225 51 aa2.74□□□□□ -1.97
HDAC8-211ENST00000415409 USH2AO75445 5202 aa2.72□□□□□ -1.97
HDAC8-211ENST00000415409 MT1XP80297 61 aa2.72□□□□□ -1.97
HDAC8-211ENST00000415409 PP632Q6XCG6 107 aa2.72□□□□□ -1.97
HDAC8-211ENST00000415409 KRTAP19-6Q3LI70 58 aa2.7□□□□□ -1.98
HDAC8-211ENST00000415409 FCGBPQ9Y6R7 5405 aaPredicted RBP2.69□□□□□ -1.98
HDAC8-211ENST00000415409 SSPOA2VEC9 5147 aa2.69□□□□□ -1.98
HDAC8-211ENST00000415409 LCE3CQ5T5A8 94 aa2.69□□□□□ -1.98
HDAC8-211ENST00000415409 KRTAP6-3Q3LI67 103 aa2.65□□□□□ -1.99
HDAC8-211ENST00000415409 OBSCNQ5VST9 7968 aa2.64□□□□□ -1.99
HDAC8-211ENST00000415409 LCE3AQ5TA76 89 aa2.61□□□□□ -1.99
HDAC8-211ENST00000415409 KRTAP4-3Q9BYR4 195 aa2.57□□□□□ -2
HDAC8-211ENST00000415409 KRTAP8-1Q8IUC2 63 aa2.56□□□□□ -2
HDAC8-211ENST00000415409 KRTAP12-3P60328 96 aa2.52□□□□□ -2.01
HDAC8-211ENST00000415409 MACF1Q9UPN3 7388 aaKnown RBP2.51□□□□□ -2.01
HDAC8-211ENST00000415409 KRTAP20-1Q3LI63 56 aa2.48□□□□□ -2.01
HDAC8-211ENST00000415409 KRTAP19-5Q3LI72 72 aa2.48□□□□□ -2.01
HDAC8-211ENST00000415409 SYNE2Q8WXH0 6885 aaKnown RBP2.46□□□□□ -2.02
HDAC8-211ENST00000415409 LCE3EQ5T5B0 92 aa2.45□□□□□ -2.02
HDAC8-211ENST00000415409 KMT2DO14686 5537 aa2.44□□□□□ -2.02
HDAC8-211ENST00000415409 SPRR5A0A1B0GTR4 108 aa2.42□□□□□ -2.02
HDAC8-211ENST00000415409 KRTAP2-3P0C7H8 128 aa2.42□□□□□ -2.02
HDAC8-211ENST00000415409 KRTAP19-7Q3SYF9 63 aa2.42□□□□□ -2.02
HDAC8-211ENST00000415409 KRTAP2-4Q9BYR9 128 aa2.42□□□□□ -2.02
HDAC8-211ENST00000415409 MT1EP04732 61 aa2.4□□□□□ -2.03
HDAC8-211ENST00000415409 MUC12Q9UKN1 5478 aa2.4□□□□□ -2.03
HDAC8-211ENST00000415409 KRTAP5-2Q701N4 177 aa2.37□□□□□ -2.03
HDAC8-211ENST00000415409 MT1LQ93083 61 aa2.35□□□□□ -2.03
HDAC8-211ENST00000415409 SPRR2FQ96RM1 72 aa2.34□□□□□ -2.03
HDAC8-211ENST00000415409 KRTAP2-1Q9BYU5 128 aa2.34□□□□□ -2.03
HDAC8-211ENST00000415409 NEBP20929 6669 aa2.34□□□□□ -2.03
HDAC8-211ENST00000415409 SPRR2EP22531 72 aa2.33□□□□□ -2.04
HDAC8-211ENST00000415409 SPRR2BP35325 72 aa2.33□□□□□ -2.04
HDAC8-211ENST00000415409 SPRR2AP35326 72 aa2.33□□□□□ -2.04
HDAC8-211ENST00000415409 KRTAP19-3Q7Z4W3 81 aa2.3□□□□□ -2.04
HDAC8-211ENST00000415409 MDN1Q9NU22 5596 aa2.29□□□□□ -2.04
HDAC8-211ENST00000415409 MT1GP13640 62 aa2.29□□□□□ -2.04
HDAC8-211ENST00000415409 SPRR2DP22532 72 aa2.25□□□□□ -2.05
HDAC8-211ENST00000415409 MT1MQ8N339 61 aa2.25□□□□□ -2.05
HDAC8-211ENST00000415409 KRTAP5-5Q701N2 237 aaPredicted RBP2.23□□□□□ -2.05
HDAC8-211ENST00000415409 LCE1CQ5T751 118 aa2.16□□□□□ -2.06
HDAC8-211ENST00000415409 LCE1BQ5T7P3 118 aa2.16□□□□□ -2.06
HDAC8-211ENST00000415409 DSTQ03001 7570 aaKnown RBP2.03□□□□□ -2.08
HDAC8-211ENST00000415409 MT1AP04731 61 aa2.01□□□□□ -2.09
HDAC8-211ENST00000415409 KRTAP5-8O75690 187 aa1.99□□□□□ -2.09
HDAC8-211ENST00000415409 KRTAP6-1Q3LI64 71 aa1.97□□□□□ -2.09
HDAC8-211ENST00000415409 MT4P47944 62 aa1.95□□□□□ -2.1
HDAC8-211ENST00000415409 KRTAP5-10Q6L8G5 202 aa1.95□□□□□ -2.1
HDAC8-211ENST00000415409 KRTAP5-7Q6L8G8 165 aa1.92□□□□□ -2.1
HDAC8-211ENST00000415409 GPR98Q8WXG9 6306 aa1.91□□□□□ -2.1
HDAC8-211ENST00000415409 KRTAP12-4P60329 112 aa1.91□□□□□ -2.1
HDAC8-211ENST00000415409 LCE3DQ9BYE3 92 aa1.91□□□□□ -2.1
HDAC8-211ENST00000415409 SYNE1Q8NF91 8797 aaKnown RBP1.9□□□□□ -2.1
HDAC8-211ENST00000415409 HMCN1Q96RW7 5635 aa1.89□□□□□ -2.11
HDAC8-211ENST00000415409 AHNAK2Q8IVF2 5795 aa1.87□□□□□ -2.11
HDAC8-211ENST00000415409 KRTAP20-2Q3LI61 65 aa1.84□□□□□ -2.11
HDAC8-211ENST00000415409 KRTAP6-2Q3LI66 62 aa1.82□□□□□ -2.12
HDAC8-211ENST00000415409 MUC19Q7Z5P9 8384 aa1.77□□□□□ -2.13
HDAC8-211ENST00000415409 KRTAP21-2Q3LI59 83 aa1.55□□□□□ -2.16
HDAC8-211ENST00000415409 MUC5ACP98088 5654 aa1.54□□□□□ -2.16
HDAC8-211ENST00000415409 MUC5BQ9HC84 5762 aaPredicted RBP1.53□□□□□ -2.16
HDAC8-211ENST00000415409 PRM1P04553 51 aa1.52□□□□□ -2.17
HDAC8-211ENST00000415409 AHNAKQ09666 5890 aaKnown RBP1.5□□□□□ -2.17
HDAC8-211ENST00000415409 PHGR1C9JFL3 82 aa1.12□□□□□ -2.23
HDAC8-211ENST00000415409 KRTAP21-1Q3LI58 79 aa1.09□□□□□ -2.23
HDAC8-211ENST00000415409 MUC16Q8WXI7 14507 aa0.75□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 11.6 ms