RNA–Protein interactions for RNA: ENST00000415046.6

PTPRK-209, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 1,029 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-209ENST00000415046 Q5VV11 94 aa1.9□□□□□ -2.11
PTPRK-209ENST00000415046 SPTSSBQ8NFR3 76 aa1.9□□□□□ -2.11
PTPRK-209ENST00000415046 SPRR2GQ9BYE4 73 aa1.9□□□□□ -2.11
PTPRK-209ENST00000415046 MT1BP07438 61 aa1.89□□□□□ -2.11
PTPRK-209ENST00000415046 COA5Q86WW8 74 aa1.89□□□□□ -2.11
PTPRK-209ENST00000415046 CRIPTQ9P021 101 aa1.89□□□□□ -2.11
PTPRK-209ENST00000415046 HMCN1Q96RW7 5635 aa1.89□□□□□ -2.11
PTPRK-209ENST00000415046 H7BZZ5 65 aa1.88□□□□□ -2.11
PTPRK-209ENST00000415046 M0QZ58 72 aa1.88□□□□□ -2.11
PTPRK-209ENST00000415046 KRTAP12-4P60329 112 aa1.88□□□□□ -2.11
PTPRK-209ENST00000415046 KRTAP19-8Q3LI54 63 aa1.88□□□□□ -2.11
PTPRK-209ENST00000415046 TMEM258P61165 79 aa1.87□□□□□ -2.11
PTPRK-209ENST00000415046 KRTAP19-6Q3LI70 58 aa1.87□□□□□ -2.11
PTPRK-209ENST00000415046 LINC01554Q52M75 96 aa1.87□□□□□ -2.11
PTPRK-209ENST00000415046 A6NN06 94 aa1.85□□□□□ -2.11
PTPRK-209ENST00000415046 PLAC4Q8WY50 150 aa1.83□□□□□ -2.12
PTPRK-209ENST00000415046 ATP5EP56381 51 aaPredicted RBP1.82□□□□□ -2.12
PTPRK-209ENST00000415046 RPS28P62857 69 aaKnown RBP1.82□□□□□ -2.12
PTPRK-209ENST00000415046 SERP1Q9Y6X1 66 aa1.82□□□□□ -2.12
PTPRK-209ENST00000415046 KRTAP13-4Q3LI77 160 aa1.81□□□□□ -2.12
PTPRK-209ENST00000415046 KRTAP12-3P60328 96 aa1.8□□□□□ -2.12
PTPRK-209ENST00000415046 NEBP20929 6669 aa1.79□□□□□ -2.12
PTPRK-209ENST00000415046 A0A0D9SG42 100 aa1.79□□□□□ -2.12
PTPRK-209ENST00000415046 BRK1Q8WUW1 75 aa1.79□□□□□ -2.12
PTPRK-209ENST00000415046 A0A1B0GU69 56 aa1.78□□□□□ -2.12
PTPRK-209ENST00000415046 MT1XP80297 61 aa1.78□□□□□ -2.12
PTPRK-209ENST00000415046 SPATA8Q6RVD6 105 aa1.78□□□□□ -2.12
PTPRK-209ENST00000415046 KTN1-AS1Q86SY8 53 aa1.78□□□□□ -2.12
PTPRK-209ENST00000415046 PRO2289Q9P1D8 64 aa1.78□□□□□ -2.12
PTPRK-209ENST00000415046 KMT2DO14686 5537 aa1.74□□□□□ -2.13
PTPRK-209ENST00000415046 KRTAP6-3Q3LI67 103 aa1.74□□□□□ -2.13
PTPRK-209ENST00000415046 PRR15LQ9BU68 103 aa1.74□□□□□ -2.13
PTPRK-209ENST00000415046 MDN1Q9NU22 5596 aa1.73□□□□□ -2.13
PTPRK-209ENST00000415046 LINC01558Q9Y6Z2 57 aa1.73□□□□□ -2.13
PTPRK-209ENST00000415046 KRTAP12-1P59990 96 aa1.71□□□□□ -2.14
PTPRK-209ENST00000415046 KRTAP8-1Q8IUC2 63 aa1.7□□□□□ -2.14
PTPRK-209ENST00000415046 MUC12Q9UKN1 5478 aa1.69□□□□□ -2.14
PTPRK-209ENST00000415046 SPRR2FQ96RM1 72 aa1.69□□□□□ -2.14
PTPRK-209ENST00000415046 UQCR11O14957 56 aa1.68□□□□□ -2.14
PTPRK-209ENST00000415046 Q1T7F1 81 aa1.68□□□□□ -2.14
PTPRK-209ENST00000415046 MIR22HGQ0VDD5 57 aa1.66□□□□□ -2.14
PTPRK-209ENST00000415046 SPRR2EP22531 72 aa1.65□□□□□ -2.15
PTPRK-209ENST00000415046 SPRR2BP35325 72 aa1.65□□□□□ -2.15
PTPRK-209ENST00000415046 SPRR2AP35326 72 aa1.65□□□□□ -2.15
PTPRK-209ENST00000415046 C10orf95Q9H7T3 257 aa1.64□□□□□ -2.15
PTPRK-209ENST00000415046 CDC42SE1Q9NRR8 79 aa1.62□□□□□ -2.15
PTPRK-209ENST00000415046 TNP1P09430 55 aa1.61□□□□□ -2.15
PTPRK-209ENST00000415046 SPRR2DP22532 72 aa1.6□□□□□ -2.15
PTPRK-209ENST00000415046 KRTAP20-1Q3LI63 56 aa1.6□□□□□ -2.15
PTPRK-209ENST00000415046 KRTAP19-5Q3LI72 72 aa1.59□□□□□ -2.15
PTPRK-209ENST00000415046 KRTAP19-7Q3SYF9 63 aa1.59□□□□□ -2.15
PTPRK-209ENST00000415046 MT1EP04732 61 aa1.58□□□□□ -2.16
PTPRK-209ENST00000415046 ROMO1P60602 79 aa1.58□□□□□ -2.16
PTPRK-209ENST00000415046 DSTQ03001 7570 aaKnown RBP1.58□□□□□ -2.16
PTPRK-209ENST00000415046 KRTAP2-3P0C7H8 128 aa1.56□□□□□ -2.16
PTPRK-209ENST00000415046 KRTAP2-4Q9BYR9 128 aa1.56□□□□□ -2.16
PTPRK-209ENST00000415046 KRTAP19-3Q7Z4W3 81 aa1.54□□□□□ -2.16
PTPRK-209ENST00000415046 MT1LQ93083 61 aa1.52□□□□□ -2.17
PTPRK-209ENST00000415046 MT1GP13640 62 aa1.51□□□□□ -2.17
PTPRK-209ENST00000415046 MT1MQ8N339 61 aa1.51□□□□□ -2.17
PTPRK-209ENST00000415046 KRTAP2-1Q9BYU5 128 aa1.5□□□□□ -2.17
PTPRK-209ENST00000415046 GPR98Q8WXG9 6306 aa1.5□□□□□ -2.17
PTPRK-209ENST00000415046 AHNAK2Q8IVF2 5795 aa1.41□□□□□ -2.18
PTPRK-209ENST00000415046 MT4P47944 62 aa1.4□□□□□ -2.19
PTPRK-209ENST00000415046 INE1O15225 51 aa1.39□□□□□ -2.19
PTPRK-209ENST00000415046 SYNE1Q8NF91 8797 aaKnown RBP1.38□□□□□ -2.19
PTPRK-209ENST00000415046 MT1AP04731 61 aa1.3□□□□□ -2.2
PTPRK-209ENST00000415046 KRTAP20-2Q3LI61 65 aa1.3□□□□□ -2.2
PTPRK-209ENST00000415046 KRTAP5-10Q6L8G5 202 aa1.3□□□□□ -2.2
PTPRK-209ENST00000415046 KRTAP6-1Q3LI64 71 aa1.29□□□□□ -2.2
PTPRK-209ENST00000415046 KRTAP6-2Q3LI66 62 aa1.22□□□□□ -2.21
PTPRK-209ENST00000415046 AHNAKQ09666 5890 aaKnown RBP1.19□□□□□ -2.22
PTPRK-209ENST00000415046 MUC5ACP98088 5654 aa1.17□□□□□ -2.22
PTPRK-209ENST00000415046 MUC5BQ9HC84 5762 aaPredicted RBP1.15□□□□□ -2.22
PTPRK-209ENST00000415046 MUC16Q8WXI7 14507 aa1.01□□□□□ -2.25
PTPRK-209ENST00000415046 PRM1P04553 51 aa0.8□□□□□ -2.28
PTPRK-209ENST00000415046 PHGR1C9JFL3 82 aa0.75□□□□□ -2.29
PTPRK-209ENST00000415046 KRTAP21-1Q3LI58 79 aa0.56□□□□□ -2.32
Retrieved 78 of 20,778 RNA–protein pairs in 71.4 ms