RNA–Protein interactions for RNA: ENST00000414480.1

LINC01048-201, Transcript of long intergenic non-protein coding RNA 1048, humanhuman

TSL 2 BASIC

Gene LINC01048, Length 511 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01048-201ENST00000414480 LINC01556Q5JQF7 62 aa1.91□□□□□ -2.1
LINC01048-201ENST00000414480 KRTAP4-1Q9BYQ7 146 aa1.9□□□□□ -2.11
LINC01048-201ENST00000414480 KRTAP19-2Q3LHN2 52 aa1.89□□□□□ -2.11
LINC01048-201ENST00000414480 SPINK6Q6UWN8 80 aa1.89□□□□□ -2.11
LINC01048-201ENST00000414480 A0A0D9SG42 100 aa1.88□□□□□ -2.11
LINC01048-201ENST00000414480 MT1HP80294 61 aa1.88□□□□□ -2.11
LINC01048-201ENST00000414480 S4R3F8 94 aa1.87□□□□□ -2.11
LINC01048-201ENST00000414480 LCE3EQ5T5B0 92 aa1.86□□□□□ -2.11
LINC01048-201ENST00000414480 KRTAP6-3Q3LI67 103 aa1.85□□□□□ -2.11
LINC01048-201ENST00000414480 KRTAP5-5Q701N2 237 aaPredicted RBP1.84□□□□□ -2.11
LINC01048-201ENST00000414480 KRTAP1-4P0C5Y4 121 aa1.83□□□□□ -2.12
LINC01048-201ENST00000414480 KRTAP20-1Q3LI63 56 aa1.83□□□□□ -2.12
LINC01048-201ENST00000414480 KRTAP13-1Q8IUC0 172 aa1.82□□□□□ -2.12
LINC01048-201ENST00000414480 KRTAP13-4Q3LI77 160 aa1.81□□□□□ -2.12
LINC01048-201ENST00000414480 A0A096LNI7 61 aa1.8□□□□□ -2.12
LINC01048-201ENST00000414480 LCE1CQ5T751 118 aa1.78□□□□□ -2.12
LINC01048-201ENST00000414480 LCE1BQ5T7P3 118 aa1.78□□□□□ -2.12
LINC01048-201ENST00000414480 FLGP20930 4061 aaPredicted RBP1.77□□□□□ -2.13
LINC01048-201ENST00000414480 MUC12Q9UKN1 5478 aa1.76□□□□□ -2.13
LINC01048-201ENST00000414480 GPR98Q8WXG9 6306 aa1.76□□□□□ -2.13
LINC01048-201ENST00000414480 KRTAP5-8O75690 187 aa1.75□□□□□ -2.13
LINC01048-201ENST00000414480 KRTAP19-6Q3LI70 58 aa1.74□□□□□ -2.13
LINC01048-201ENST00000414480 KMT2DO14686 5537 aa1.74□□□□□ -2.13
LINC01048-201ENST00000414480 SPRR5A0A1B0GTR4 108 aa1.72□□□□□ -2.13
LINC01048-201ENST00000414480 M0R2T5 61 aa1.71□□□□□ -2.14
LINC01048-201ENST00000414480 KRTAP2-3P0C7H8 128 aa1.71□□□□□ -2.14
LINC01048-201ENST00000414480 KRTAP2-4Q9BYR9 128 aa1.71□□□□□ -2.14
LINC01048-201ENST00000414480 KRTAP12-1P59990 96 aa1.7□□□□□ -2.14
LINC01048-201ENST00000414480 M0QZ58 72 aa1.67□□□□□ -2.14
LINC01048-201ENST00000414480 MT2AP02795 61 aa1.67□□□□□ -2.14
LINC01048-201ENST00000414480 MT1FP04733 61 aa1.67□□□□□ -2.14
LINC01048-201ENST00000414480 MDN1Q9NU22 5596 aa1.64□□□□□ -2.15
LINC01048-201ENST00000414480 KRTAP2-1Q9BYU5 128 aa1.63□□□□□ -2.15
LINC01048-201ENST00000414480 RPS29P62273 56 aaKnown RBP1.62□□□□□ -2.15
LINC01048-201ENST00000414480 KRTAP10-10P60014 251 aa1.58□□□□□ -2.16
LINC01048-201ENST00000414480 TNP1P09430 55 aa1.55□□□□□ -2.16
LINC01048-201ENST00000414480 SPRR2EP22531 72 aa1.53□□□□□ -2.16
LINC01048-201ENST00000414480 SPRR2BP35325 72 aa1.53□□□□□ -2.16
LINC01048-201ENST00000414480 SPRR2AP35326 72 aa1.53□□□□□ -2.16
LINC01048-201ENST00000414480 C9orf92A6NGG3 77 aa1.52□□□□□ -2.17
LINC01048-201ENST00000414480 DSTQ03001 7570 aaKnown RBP1.52□□□□□ -2.17
LINC01048-201ENST00000414480 KRTAP5-10Q6L8G5 202 aa1.49□□□□□ -2.17
LINC01048-201ENST00000414480 MUC19Q7Z5P9 8384 aa1.48□□□□□ -2.17
LINC01048-201ENST00000414480 SPRR2DP22532 72 aa1.48□□□□□ -2.17
LINC01048-201ENST00000414480 SPRR2FQ96RM1 72 aa1.48□□□□□ -2.17
LINC01048-201ENST00000414480 KRTAP5-7Q6L8G8 165 aa1.47□□□□□ -2.17
LINC01048-201ENST00000414480 MT1BP07438 61 aa1.46□□□□□ -2.18
LINC01048-201ENST00000414480 KRTAP12-4P60329 112 aa1.46□□□□□ -2.18
LINC01048-201ENST00000414480 AHNAK2Q8IVF2 5795 aa1.45□□□□□ -2.18
LINC01048-201ENST00000414480 LCE3DQ9BYE3 92 aa1.41□□□□□ -2.18
LINC01048-201ENST00000414480 HMCN1Q96RW7 5635 aa1.4□□□□□ -2.18
LINC01048-201ENST00000414480 KRTAP19-8Q3LI54 63 aa1.39□□□□□ -2.19
LINC01048-201ENST00000414480 KRTAP8-1Q8IUC2 63 aa1.36□□□□□ -2.19
LINC01048-201ENST00000414480 SPRR2GQ9BYE4 73 aa1.34□□□□□ -2.19
LINC01048-201ENST00000414480 MT4P47944 62 aa1.33□□□□□ -2.2
LINC01048-201ENST00000414480 KRTAP12-3P60328 96 aa1.31□□□□□ -2.2
LINC01048-201ENST00000414480 MT1XP80297 61 aa1.28□□□□□ -2.2
LINC01048-201ENST00000414480 KRTAP21-2Q3LI59 83 aa1.28□□□□□ -2.2
LINC01048-201ENST00000414480 AHNAKQ09666 5890 aaKnown RBP1.27□□□□□ -2.21
LINC01048-201ENST00000414480 MUC5ACP98088 5654 aa1.25□□□□□ -2.21
LINC01048-201ENST00000414480 MUC5BQ9HC84 5762 aaPredicted RBP1.24□□□□□ -2.21
LINC01048-201ENST00000414480 KRTAP20-2Q3LI61 65 aa1.2□□□□□ -2.22
LINC01048-201ENST00000414480 PRM1P04553 51 aa1.19□□□□□ -2.22
LINC01048-201ENST00000414480 KRTAP19-3Q7Z4W3 81 aa1.19□□□□□ -2.22
LINC01048-201ENST00000414480 KRTAP19-7Q3SYF9 63 aa1.17□□□□□ -2.22
LINC01048-201ENST00000414480 MT1EP04732 61 aa1.15□□□□□ -2.23
LINC01048-201ENST00000414480 MT1GP13640 62 aa1.12□□□□□ -2.23
LINC01048-201ENST00000414480 KRTAP19-5Q3LI72 72 aa1.12□□□□□ -2.23
LINC01048-201ENST00000414480 MT1MQ8N339 61 aa1.11□□□□□ -2.23
LINC01048-201ENST00000414480 SYNE1Q8NF91 8797 aaKnown RBP1.06□□□□□ -2.24
LINC01048-201ENST00000414480 MT1LQ93083 61 aa1.04□□□□□ -2.24
LINC01048-201ENST00000414480 MT1AP04731 61 aa1.01□□□□□ -2.25
LINC01048-201ENST00000414480 KRTAP6-2Q3LI66 62 aa0.95□□□□□ -2.26
LINC01048-201ENST00000414480 KRTAP6-1Q3LI64 71 aa0.91□□□□□ -2.26
LINC01048-201ENST00000414480 PHGR1C9JFL3 82 aa0.84□□□□□ -2.27
LINC01048-201ENST00000414480 KRTAP21-1Q3LI58 79 aa0.78□□□□□ -2.28
LINC01048-201ENST00000414480 MUC16Q8WXI7 14507 aa0.58□□□□□ -2.32
Retrieved 77 of 20,778 RNA–protein pairs in 6.6 ms