RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 DNAH2Q9P225 4427 aa0.33□□□□□ -2.36
HMGB3P31-201ENST00000413333 DNAH17Q9UFH2 4485 aa0.32□□□□□ -2.36
HMGB3P31-201ENST00000413333 NOP10Q9NPE3 64 aaKnown RBP0.31□□□□□ -2.36
HMGB3P31-201ENST00000413333 C9orf92A6NGG3 77 aa0.3□□□□□ -2.36
HMGB3P31-201ENST00000413333 NDUFA1O15239 70 aa0.3□□□□□ -2.36
HMGB3P31-201ENST00000413333 SMR3BP02814 79 aaPredicted RBP0.29□□□□□ -2.36
HMGB3P31-201ENST00000413333 MUC17Q685J3 4493 aa0.28□□□□□ -2.36
HMGB3P31-201ENST00000413333 MMP24-AS1A0A0U1RRL7 71 aa0.28□□□□□ -2.36
HMGB3P31-201ENST00000413333 VPS13DQ5THJ4 4388 aa0.28□□□□□ -2.36
HMGB3P31-201ENST00000413333 DEFB131AP59861 70 aa0.27□□□□□ -2.37
HMGB3P31-201ENST00000413333 DEFB124Q8NES8 71 aa0.27□□□□□ -2.37
HMGB3P31-201ENST00000413333 H3BNG1 76 aa0.25□□□□□ -2.37
HMGB3P31-201ENST00000413333 M0QY20 66 aa0.25□□□□□ -2.37
HMGB3P31-201ENST00000413333 SPRR2FQ96RM1 72 aa0.25□□□□□ -2.37
HMGB3P31-201ENST00000413333 DNAH8Q96JB1 4490 aa0.25□□□□□ -2.37
HMGB3P31-201ENST00000413333 A8MTW9 85 aa0.23□□□□□ -2.37
HMGB3P31-201ENST00000413333 KRTAP6-2Q3LI66 62 aa0.23□□□□□ -2.37
HMGB3P31-201ENST00000413333 DUOX1Q9NRD9 1551 aa0.21□□□□□ -2.38
HMGB3P31-201ENST00000413333 M0QZ58 72 aa0.19□□□□□ -2.38
HMGB3P31-201ENST00000413333 TNP1P09430 55 aa0.19□□□□□ -2.38
HMGB3P31-201ENST00000413333 MT1AP04731 61 aa0.18□□□□□ -2.38
HMGB3P31-201ENST00000413333 DEFB104AQ8WTQ1 72 aa0.18□□□□□ -2.38
HMGB3P31-201ENST00000413333 KRTAP20-2Q3LI61 65 aa0.17□□□□□ -2.38
HMGB3P31-201ENST00000413333 DEFB110Q30KQ9 67 aa0.16□□□□□ -2.38
HMGB3P31-201ENST00000413333 GCC2Q8IWJ2 1684 aa0.16□□□□□ -2.38
HMGB3P31-201ENST00000413333 CLPSL2Q6UWE3 100 aa0.15□□□□□ -2.39
HMGB3P31-201ENST00000413333 SPRR2GQ9BYE4 73 aa0.15□□□□□ -2.39
HMGB3P31-201ENST00000413333 POLR2KP53803 58 aaKnown RBP0.14□□□□□ -2.39
HMGB3P31-201ENST00000413333 SNRPGP62308 76 aaKnown RBP0.12□□□□□ -2.39
HMGB3P31-201ENST00000413333 MT1HP80294 61 aa0.12□□□□□ -2.39
HMGB3P31-201ENST00000413333 KRTAP8-1Q8IUC2 63 aa0.1□□□□□ -2.39
HMGB3P31-201ENST00000413333 MT1HL1P0DM35 61 aa0.08□□□□□ -2.4
HMGB3P31-201ENST00000413333 RPL39P62891 51 aaKnown RBP0.08□□□□□ -2.4
HMGB3P31-201ENST00000413333 KRTAP19-5Q3LI72 72 aa0.08□□□□□ -2.4
HMGB3P31-201ENST00000413333 RPL39LQ96EH5 51 aaKnown RBP0.02□□□□□ -2.41
HMGB3P31-201ENST00000413333 SPART-AS1P0CW21 52 aa0.01□□□□□ -2.41
HMGB3P31-201ENST00000413333 STATHP02808 62 aa-0.01□□□□□ -2.41
HMGB3P31-201ENST00000413333 MT1BP07438 61 aa-0.01□□□□□ -2.41
HMGB3P31-201ENST00000413333 KRTAP6-1Q3LI64 71 aa-0.01□□□□□ -2.41
HMGB3P31-201ENST00000413333 MT2AP02795 61 aa-0.02□□□□□ -2.41
HMGB3P31-201ENST00000413333 MT1FP04733 61 aa-0.02□□□□□ -2.41
HMGB3P31-201ENST00000413333 KRTAP19-2Q3LHN2 52 aa-0.02□□□□□ -2.41
HMGB3P31-201ENST00000413333 TOMM7Q9P0U1 55 aa-0.02□□□□□ -2.41
HMGB3P31-201ENST00000413333 DEFB1P60022 68 aa-0.05□□□□□ -2.42
HMGB3P31-201ENST00000413333 KRTAP19-7Q3SYF9 63 aa-0.05□□□□□ -2.42
HMGB3P31-201ENST00000413333 LEAP2Q969E1 77 aa-0.05□□□□□ -2.42
HMGB3P31-201ENST00000413333 KRTAP19-8Q3LI54 63 aa-0.08□□□□□ -2.42
HMGB3P31-201ENST00000413333 LINC01590Q5TEZ4 76 aa-0.11□□□□□ -2.43
HMGB3P31-201ENST00000413333 MT1GP13640 62 aa-0.12□□□□□ -2.43
HMGB3P31-201ENST00000413333 ARHGAP5-AS1Q96IT6 56 aa-0.13□□□□□ -2.43
HMGB3P31-201ENST00000413333 MT1EP04732 61 aa-0.15□□□□□ -2.43
HMGB3P31-201ENST00000413333 MT1MQ8N339 61 aa-0.15□□□□□ -2.43
HMGB3P31-201ENST00000413333 RPS29P62273 56 aaKnown RBP-0.18□□□□□ -2.44
HMGB3P31-201ENST00000413333 TTTY10Q9BZA0 68 aa-0.18□□□□□ -2.44
HMGB3P31-201ENST00000413333 DEFB108AA8MXU0 73 aa-0.19□□□□□ -2.44
HMGB3P31-201ENST00000413333 MT1XP80297 61 aa-0.19□□□□□ -2.44
HMGB3P31-201ENST00000413333 MT1LQ93083 61 aa-0.19□□□□□ -2.44
HMGB3P31-201ENST00000413333 DEFB136Q30KP8 78 aa-0.2□□□□□ -2.44
HMGB3P31-201ENST00000413333 H3BSH0 61 aa-0.21□□□□□ -2.44
HMGB3P31-201ENST00000413333 Q9Y3F1 56 aa-0.21□□□□□ -2.44
HMGB3P31-201ENST00000413333 PRCDQ00LT1 54 aa-0.22□□□□□ -2.44
HMGB3P31-201ENST00000413333 DEFB4AO15263 64 aa-0.24□□□□□ -2.45
HMGB3P31-201ENST00000413333 DEFB133Q30KQ1 61 aa-0.24□□□□□ -2.45
HMGB3P31-201ENST00000413333 K7EIM0 57 aa-0.25□□□□□ -2.45
HMGB3P31-201ENST00000413333 CD52P31358 61 aa-0.25□□□□□ -2.45
HMGB3P31-201ENST00000413333 RHPN1-AS1Q9BWJ2 59 aa-0.25□□□□□ -2.45
HMGB3P31-201ENST00000413333 A0A096LNI7 61 aa-0.27□□□□□ -2.45
HMGB3P31-201ENST00000413333 DEFB108BQ8NET1 73 aa-0.3□□□□□ -2.46
HMGB3P31-201ENST00000413333 HTN1P15515 57 aa-0.32□□□□□ -2.46
HMGB3P31-201ENST00000413333 HTN3P15516 51 aa-0.33□□□□□ -2.46
HMGB3P31-201ENST00000413333 H3BUX3 64 aa-0.34□□□□□ -2.46
HMGB3P31-201ENST00000413333 TMEM167AQ8TBQ9 72 aa-0.36□□□□□ -2.47
HMGB3P31-201ENST00000413333 COX14Q96I36 57 aa-0.36□□□□□ -2.47
HMGB3P31-201ENST00000413333 RPL39P5Q59GN2 51 aa-0.4□□□□□ -2.47
HMGB3P31-201ENST00000413333 LINC01556Q5JQF7 62 aa-0.41□□□□□ -2.48
HMGB3P31-201ENST00000413333 APELAP0DMC3 54 aa-0.46□□□□□ -2.48
HMGB3P31-201ENST00000413333 A0A096LPF7 62 aa-0.49□□□□□ -2.49
Retrieved 77 of 20,778 RNA–protein pairs in 54.5 ms