RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 MT1GP13640 62 aa5.6□□□□□ -1.51
SDCBP-202ENST00000413219 KRTAP4-3Q9BYR4 195 aa5.6□□□□□ -1.51
SDCBP-202ENST00000413219 MT1MQ8N339 61 aa5.59□□□□□ -1.51
SDCBP-202ENST00000413219 LCE2DQ5TA82 110 aaPredicted RBP5.57□□□□□ -1.52
SDCBP-202ENST00000413219 KRTAP19-3Q7Z4W3 81 aa5.57□□□□□ -1.52
SDCBP-202ENST00000413219 KRTAP12-4P60329 112 aa5.47□□□□□ -1.53
SDCBP-202ENST00000413219 CRCT1Q9UGL9 99 aa5.39□□□□□ -1.55
SDCBP-202ENST00000413219 LCE5AQ5TCM9 118 aa5.35□□□□□ -1.55
SDCBP-202ENST00000413219 FCGBPQ9Y6R7 5405 aaPredicted RBP5.33□□□□□ -1.56
SDCBP-202ENST00000413219 MUC12Q9UKN1 5478 aa5.26□□□□□ -1.57
SDCBP-202ENST00000413219 MT1AP04731 61 aa5.25□□□□□ -1.57
SDCBP-202ENST00000413219 LCE3BQ5TA77 95 aa5.22□□□□□ -1.57
SDCBP-202ENST00000413219 SPRR2FQ96RM1 72 aa5.19□□□□□ -1.58
SDCBP-202ENST00000413219 KRTAP4-9Q9BYQ8 210 aa5.11□□□□□ -1.59
SDCBP-202ENST00000413219 KRTAP6-1Q3LI64 71 aa5.09□□□□□ -1.59
SDCBP-202ENST00000413219 LCE3DQ9BYE3 92 aa5.06□□□□□ -1.6
SDCBP-202ENST00000413219 KRTAP9-2Q9BYQ4 174 aa5.04□□□□□ -1.6
SDCBP-202ENST00000413219 FSIP2Q5CZC0 6907 aa5.04□□□□□ -1.6
SDCBP-202ENST00000413219 LCE3EQ5T5B0 92 aa5.03□□□□□ -1.6
SDCBP-202ENST00000413219 DSTQ03001 7570 aaKnown RBP4.95□□□□□ -1.62
SDCBP-202ENST00000413219 KRTAP5-5Q701N2 237 aaPredicted RBP4.95□□□□□ -1.62
SDCBP-202ENST00000413219 SYNE1Q8NF91 8797 aaKnown RBP4.92□□□□□ -1.62
SDCBP-202ENST00000413219 KRTAP9-7A8MTY7 169 aa4.87□□□□□ -1.63
SDCBP-202ENST00000413219 PRM1P04553 51 aa4.87□□□□□ -1.63
SDCBP-202ENST00000413219 LCE1AQ5T7P2 110 aa4.83□□□□□ -1.64
SDCBP-202ENST00000413219 KRTAP5-9P26371 169 aa4.78□□□□□ -1.64
SDCBP-202ENST00000413219 KRTAP9-4Q9BYQ2 154 aa4.76□□□□□ -1.65
SDCBP-202ENST00000413219 MACF1Q9UPN3 7388 aaKnown RBP4.74□□□□□ -1.65
SDCBP-202ENST00000413219 KRTAP6-2Q3LI66 62 aa4.67□□□□□ -1.66
SDCBP-202ENST00000413219 SPRR2EP22531 72 aa4.65□□□□□ -1.66
SDCBP-202ENST00000413219 SPRR2BP35325 72 aa4.65□□□□□ -1.66
SDCBP-202ENST00000413219 SPRR2AP35326 72 aa4.65□□□□□ -1.66
SDCBP-202ENST00000413219 MDN1Q9NU22 5596 aa4.64□□□□□ -1.67
SDCBP-202ENST00000413219 MT3P25713 68 aa4.56□□□□□ -1.68
SDCBP-202ENST00000413219 SYNE2Q8WXH0 6885 aaKnown RBP4.5□□□□□ -1.69
SDCBP-202ENST00000413219 KRTAP6-3Q3LI67 103 aa4.49□□□□□ -1.69
SDCBP-202ENST00000413219 SPRR2DP22532 72 aa4.45□□□□□ -1.7
SDCBP-202ENST00000413219 KRTAP9-6A0A140TA67 174 aa4.44□□□□□ -1.7
SDCBP-202ENST00000413219 KRTAP2-2Q9BYT5 123 aa4.34□□□□□ -1.71
SDCBP-202ENST00000413219 KRTAP4-6Q9BYQ5 205 aa4.32□□□□□ -1.72
SDCBP-202ENST00000413219 KRTAP5-4Q6L8H1 288 aa4.23□□□□□ -1.73
SDCBP-202ENST00000413219 OBSCNQ5VST9 7968 aa4.13□□□□□ -1.75
SDCBP-202ENST00000413219 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.02□□□□□ -1.77
SDCBP-202ENST00000413219 KRTAP5-2Q701N4 177 aa4.01□□□□□ -1.77
SDCBP-202ENST00000413219 KRTAP20-2Q3LI61 65 aa3.94□□□□□ -1.78
SDCBP-202ENST00000413219 LCE4AQ5TA78 99 aa3.9□□□□□ -1.78
SDCBP-202ENST00000413219 MT4P47944 62 aa3.88□□□□□ -1.79
SDCBP-202ENST00000413219 MUC5ACP98088 5654 aa3.79□□□□□ -1.8
SDCBP-202ENST00000413219 KRTAP5-3Q6L8H2 238 aa3.75□□□□□ -1.81
SDCBP-202ENST00000413219 NEBP20929 6669 aa3.72□□□□□ -1.81
SDCBP-202ENST00000413219 LCE1DQ5T752 114 aa3.7□□□□□ -1.82
SDCBP-202ENST00000413219 LCE1EQ5T753 118 aa3.69□□□□□ -1.82
SDCBP-202ENST00000413219 KRTAP5-10Q6L8G5 202 aa3.67□□□□□ -1.82
SDCBP-202ENST00000413219 KRTAP20-1Q3LI63 56 aa3.66□□□□□ -1.82
SDCBP-202ENST00000413219 KRTAP5-1Q6L8H4 278 aa3.63□□□□□ -1.83
SDCBP-202ENST00000413219 HMCN1Q96RW7 5635 aa3.62□□□□□ -1.83
SDCBP-202ENST00000413219 KRTAP4-11Q9BYQ6 195 aa3.62□□□□□ -1.83
SDCBP-202ENST00000413219 LCE1BQ5T7P3 118 aa3.56□□□□□ -1.84
SDCBP-202ENST00000413219 KRTAP9-9Q9BYP9 154 aa3.54□□□□□ -1.84
SDCBP-202ENST00000413219 KRTAP4-12Q9BQ66 201 aa3.51□□□□□ -1.85
SDCBP-202ENST00000413219 LCE1CQ5T751 118 aa3.48□□□□□ -1.85
SDCBP-202ENST00000413219 KRTAP4-2Q9BYR5 136 aa3.46□□□□□ -1.86
SDCBP-202ENST00000413219 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.34□□□□□ -1.88
SDCBP-202ENST00000413219 KRTAP21-2Q3LI59 83 aa3.3□□□□□ -1.88
SDCBP-202ENST00000413219 KRTAP21-1Q3LI58 79 aa3.14□□□□□ -1.91
SDCBP-202ENST00000413219 KRTAP5-8O75690 187 aa3.1□□□□□ -1.91
SDCBP-202ENST00000413219 KRTAP5-7Q6L8G8 165 aa3.1□□□□□ -1.91
SDCBP-202ENST00000413219 KRTAP5-11Q6L8G4 156 aa2.97□□□□□ -1.93
SDCBP-202ENST00000413219 KRTAP4-4Q9BYR3 166 aa2.92□□□□□ -1.94
SDCBP-202ENST00000413219 MUC5BQ9HC84 5762 aaPredicted RBP2.81□□□□□ -1.96
SDCBP-202ENST00000413219 AHNAK2Q8IVF2 5795 aa2.73□□□□□ -1.97
SDCBP-202ENST00000413219 MUC19Q7Z5P9 8384 aa2.72□□□□□ -1.97
SDCBP-202ENST00000413219 PHGR1C9JFL3 82 aa2.55□□□□□ -2
SDCBP-202ENST00000413219 LCE1FQ5T754 118 aa2.44□□□□□ -2.02
SDCBP-202ENST00000413219 GPR98Q8WXG9 6306 aa2.27□□□□□ -2.05
SDCBP-202ENST00000413219 AHNAKQ09666 5890 aaKnown RBP1.92□□□□□ -2.1
SDCBP-202ENST00000413219 MUC16Q8WXI7 14507 aa1.73□□□□□ -2.13
Retrieved 77 of 20,778 RNA–protein pairs in 9.2 ms