RNA–Protein interactions for RNA: ENST00000412894.5

FAM3A-206, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 832 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-206ENST00000412894 KRTAP2-2Q9BYT5 123 aa5.72□□□□□ -1.49
FAM3A-206ENST00000412894 KRTAP2-1Q9BYU5 128 aa5.72□□□□□ -1.49
FAM3A-206ENST00000412894 LCE5AQ5TCM9 118 aa5.71□□□□□ -1.5
FAM3A-206ENST00000412894 KRTAP25-1Q3LHN0 102 aa5.63□□□□□ -1.51
FAM3A-206ENST00000412894 MT1GP13640 62 aa5.62□□□□□ -1.51
FAM3A-206ENST00000412894 MT1LQ93083 61 aa5.6□□□□□ -1.51
FAM3A-206ENST00000412894 PP632Q6XCG6 107 aa5.58□□□□□ -1.52
FAM3A-206ENST00000412894 KRTAP12-3P60328 96 aa5.55□□□□□ -1.52
FAM3A-206ENST00000412894 MT1MQ8N339 61 aa5.54□□□□□ -1.52
FAM3A-206ENST00000412894 CDC42SE1Q9NRR8 79 aa5.5□□□□□ -1.53
FAM3A-206ENST00000412894 DSTQ03001 7570 aaKnown RBP5.46□□□□□ -1.54
FAM3A-206ENST00000412894 ROMO1P60602 79 aa5.41□□□□□ -1.54
FAM3A-206ENST00000412894 KRTAP4-3Q9BYR4 195 aa5.41□□□□□ -1.54
FAM3A-206ENST00000412894 KRTAP23-1A1A580 65 aa5.4□□□□□ -1.54
FAM3A-206ENST00000412894 KRTAP4-7Q9BYR0 210 aa5.35□□□□□ -1.55
FAM3A-206ENST00000412894 KRTAP4-9Q9BYQ8 210 aa5.27□□□□□ -1.57
FAM3A-206ENST00000412894 KRTAP15-1Q3LI76 137 aa5.25□□□□□ -1.57
FAM3A-206ENST00000412894 KRTAP19-4Q3LI73 84 aa5.21□□□□□ -1.58
FAM3A-206ENST00000412894 LCE4AQ5TA78 99 aa5.21□□□□□ -1.58
FAM3A-206ENST00000412894 LCE1DQ5T752 114 aa5.17□□□□□ -1.58
FAM3A-206ENST00000412894 MT4P47944 62 aa5.15□□□□□ -1.59
FAM3A-206ENST00000412894 BRK1Q8WUW1 75 aa5.15□□□□□ -1.59
FAM3A-206ENST00000412894 KRTAP5-4Q6L8H1 288 aa5.14□□□□□ -1.59
FAM3A-206ENST00000412894 LCE3CQ5T5A8 94 aa5.12□□□□□ -1.59
FAM3A-206ENST00000412894 LOC100996750A0A140TA64 210 aa5.06□□□□□ -1.6
FAM3A-206ENST00000412894 KRTAP5-5Q701N2 237 aaPredicted RBP5.04□□□□□ -1.6
FAM3A-206ENST00000412894 HMCN1Q96RW7 5635 aa5.03□□□□□ -1.6
FAM3A-206ENST00000412894 KRTAP4-6Q9BYQ5 205 aa5.01□□□□□ -1.61
FAM3A-206ENST00000412894 KRTAP12-4P60329 112 aa4.88□□□□□ -1.63
FAM3A-206ENST00000412894 KRTAP20-2Q3LI61 65 aa4.86□□□□□ -1.63
FAM3A-206ENST00000412894 SPRR5A0A1B0GTR4 108 aa4.84□□□□□ -1.63
FAM3A-206ENST00000412894 KRTAP9-6A8MVA2 160 aa4.83□□□□□ -1.64
FAM3A-206ENST00000412894 PMAIP1Q13794 54 aa4.83□□□□□ -1.64
FAM3A-206ENST00000412894 AHNAK2Q8IVF2 5795 aa4.79□□□□□ -1.64
FAM3A-206ENST00000412894 GPR98Q8WXG9 6306 aa4.79□□□□□ -1.64
FAM3A-206ENST00000412894 MT1AP04731 61 aa4.77□□□□□ -1.65
FAM3A-206ENST00000412894 SYNE1Q8NF91 8797 aaKnown RBP4.75□□□□□ -1.65
FAM3A-206ENST00000412894 KRTAP6-1Q3LI64 71 aa4.74□□□□□ -1.65
FAM3A-206ENST00000412894 KRTAP5-3Q6L8H2 238 aa4.69□□□□□ -1.66
FAM3A-206ENST00000412894 KRTAP5-10Q6L8G5 202 aa4.68□□□□□ -1.66
FAM3A-206ENST00000412894 PRAC1Q96KF2 57 aa4.63□□□□□ -1.67
FAM3A-206ENST00000412894 PRO0628Q9UI54 55 aa4.62□□□□□ -1.67
FAM3A-206ENST00000412894 KRTAP9-4Q9BYQ2 154 aa4.58□□□□□ -1.68
FAM3A-206ENST00000412894 KRTAP5-2Q701N4 177 aa4.54□□□□□ -1.68
FAM3A-206ENST00000412894 KRTAP6-2Q3LI66 62 aa4.48□□□□□ -1.69
FAM3A-206ENST00000412894 KRTAP5-7Q6L8G8 165 aa4.47□□□□□ -1.69
FAM3A-206ENST00000412894 KTN1-AS1Q86SY8 53 aa4.39□□□□□ -1.71
FAM3A-206ENST00000412894 KRTAP4-11Q9BYQ6 195 aa4.37□□□□□ -1.71
FAM3A-206ENST00000412894 MT3P25713 68 aa4.35□□□□□ -1.71
FAM3A-206ENST00000412894 H3BS24 57 aa4.32□□□□□ -1.72
FAM3A-206ENST00000412894 A0A0A0MQY5 61 aa4.26□□□□□ -1.73
FAM3A-206ENST00000412894 KRTAP5-8O75690 187 aa4.22□□□□□ -1.73
FAM3A-206ENST00000412894 OBSCNQ5VST9 7968 aa4.15□□□□□ -1.75
FAM3A-206ENST00000412894 KRTAP5-1Q6L8H4 278 aa4.03□□□□□ -1.76
FAM3A-206ENST00000412894 KRTAP9-9Q9BYP9 154 aa3.98□□□□□ -1.77
FAM3A-206ENST00000412894 LCE1EQ5T753 118 aa3.93□□□□□ -1.78
FAM3A-206ENST00000412894 MUC5ACP98088 5654 aa3.9□□□□□ -1.79
FAM3A-206ENST00000412894 MUC5BQ9HC84 5762 aaPredicted RBP3.88□□□□□ -1.79
FAM3A-206ENST00000412894 LUZP6Q538Z0 58 aa3.87□□□□□ -1.79
FAM3A-206ENST00000412894 AHNAKQ09666 5890 aaKnown RBP3.83□□□□□ -1.8
FAM3A-206ENST00000412894 LCE3DQ9BYE3 92 aa3.74□□□□□ -1.81
FAM3A-206ENST00000412894 LCE1BQ5T7P3 118 aa3.72□□□□□ -1.81
FAM3A-206ENST00000412894 KRTAP4-2Q9BYR5 136 aa3.71□□□□□ -1.82
FAM3A-206ENST00000412894 LCE1CQ5T751 118 aa3.65□□□□□ -1.83
FAM3A-206ENST00000412894 LCE3EQ5T5B0 92 aa3.55□□□□□ -1.84
FAM3A-206ENST00000412894 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.34□□□□□ -1.87
FAM3A-206ENST00000412894 KRTAP4-12Q9BQ66 201 aa3.31□□□□□ -1.88
FAM3A-206ENST00000412894 KRTAP5-11Q6L8G4 156 aa3.29□□□□□ -1.88
FAM3A-206ENST00000412894 NDUFAF8A1L188 74 aa3.28□□□□□ -1.88
FAM3A-206ENST00000412894 LCE1FQ5T754 118 aa3.14□□□□□ -1.91
FAM3A-206ENST00000412894 KRTAP21-2Q3LI59 83 aa3.1□□□□□ -1.91
FAM3A-206ENST00000412894 KRTAP4-4Q9BYR3 166 aa2.84□□□□□ -1.95
FAM3A-206ENST00000412894 PHGR1C9JFL3 82 aa2.83□□□□□ -1.96
FAM3A-206ENST00000412894 PRM1P04553 51 aa2.79□□□□□ -1.96
FAM3A-206ENST00000412894 INE1O15225 51 aa2.64□□□□□ -1.99
FAM3A-206ENST00000412894 MUC19Q7Z5P9 8384 aa2.55□□□□□ -2
FAM3A-206ENST00000412894 KRTAP21-1Q3LI58 79 aa2.06□□□□□ -2.08
FAM3A-206ENST00000412894 MUC16Q8WXI7 14507 aa1.87□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 9.3 ms