RNA–Protein interactions for RNA: ENST00000412145.5

PTPN3-203, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-203ENST00000412145 MT1AP04731 61 aa2.2□□□□□ -2.06
PTPN3-203ENST00000412145 LCE2AQ5TA79 106 aaPredicted RBP2.19□□□□□ -2.06
PTPN3-203ENST00000412145 KRTAP9-7A8MTY7 169 aa2.17□□□□□ -2.06
PTPN3-203ENST00000412145 KRTAP20-1Q3LI63 56 aa2.15□□□□□ -2.06
PTPN3-203ENST00000412145 KRTAP2-3P0C7H8 128 aa2.14□□□□□ -2.07
PTPN3-203ENST00000412145 KRTAP2-4Q9BYR9 128 aa2.14□□□□□ -2.07
PTPN3-203ENST00000412145 KRTAP2-1Q9BYU5 128 aa2.14□□□□□ -2.07
PTPN3-203ENST00000412145 LCE1DQ5T752 114 aa2.13□□□□□ -2.07
PTPN3-203ENST00000412145 LCE1BQ5T7P3 118 aa2.12□□□□□ -2.07
PTPN3-203ENST00000412145 KRTAP4-3Q9BYR4 195 aa2.12□□□□□ -2.07
PTPN3-203ENST00000412145 LOC100996750A0A140TA64 210 aa2.11□□□□□ -2.07
PTPN3-203ENST00000412145 KMT2CQ8NEZ4 4911 aaKnown RBP2.1□□□□□ -2.07
PTPN3-203ENST00000412145 LCE1AQ5T7P2 110 aa2.09□□□□□ -2.07
PTPN3-203ENST00000412145 ABCA13Q86UQ4 5058 aa2.09□□□□□ -2.07
PTPN3-203ENST00000412145 PCLOQ9Y6V0 5065 aa2.08□□□□□ -2.08
PTPN3-203ENST00000412145 EPPK1P58107 5090 aaKnown RBP2.06□□□□□ -2.08
PTPN3-203ENST00000412145 KRTAP6-3Q3LI67 103 aa2.06□□□□□ -2.08
PTPN3-203ENST00000412145 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.05□□□□□ -2.08
PTPN3-203ENST00000412145 SYNE1Q8NF91 8797 aaKnown RBP2.05□□□□□ -2.08
PTPN3-203ENST00000412145 FSIP2Q5CZC0 6907 aa2.05□□□□□ -2.08
PTPN3-203ENST00000412145 LCE4AQ5TA78 99 aa2.04□□□□□ -2.08
PTPN3-203ENST00000412145 LCE5AQ5TCM9 118 aa2.02□□□□□ -2.09
PTPN3-203ENST00000412145 FAT4Q6V0I7 4981 aa2.02□□□□□ -2.09
PTPN3-203ENST00000412145 HMCN2Q8NDA2 5059 aa2.02□□□□□ -2.09
PTPN3-203ENST00000412145 OBSCNQ5VST9 7968 aa2□□□□□ -2.09
PTPN3-203ENST00000412145 KRTAP4-9Q9BYQ8 210 aa1.99□□□□□ -2.09
PTPN3-203ENST00000412145 KRTAP19-7Q3SYF9 63 aa1.99□□□□□ -2.09
PTPN3-203ENST00000412145 KRTAP2-2Q9BYT5 123 aa1.99□□□□□ -2.09
PTPN3-203ENST00000412145 KRTAP6-2Q3LI66 62 aa1.96□□□□□ -2.1
PTPN3-203ENST00000412145 KRTAP9-4Q9BYQ2 154 aa1.95□□□□□ -2.1
PTPN3-203ENST00000412145 SYNE2Q8WXH0 6885 aaKnown RBP1.93□□□□□ -2.1
PTPN3-203ENST00000412145 UBR4Q5T4S7 5183 aa1.92□□□□□ -2.1
PTPN3-203ENST00000412145 LCE1CQ5T751 118 aa1.89□□□□□ -2.11
PTPN3-203ENST00000412145 LCE1EQ5T753 118 aa1.89□□□□□ -2.11
PTPN3-203ENST00000412145 LCE1FQ5T754 118 aa1.89□□□□□ -2.11
PTPN3-203ENST00000412145 MUC2Q02817 5179 aa1.89□□□□□ -2.11
PTPN3-203ENST00000412145 RNF213Q63HN8 5207 aa1.86□□□□□ -2.11
PTPN3-203ENST00000412145 KRTAP6-1Q3LI64 71 aa1.85□□□□□ -2.11
PTPN3-203ENST00000412145 KRTAP9-9Q9BYP9 154 aa1.79□□□□□ -2.12
PTPN3-203ENST00000412145 DSTQ03001 7570 aaKnown RBP1.76□□□□□ -2.13
PTPN3-203ENST00000412145 KRTAP9-6A8MVA2 160 aa1.72□□□□□ -2.13
PTPN3-203ENST00000412145 MACF1Q9UPN3 7388 aaKnown RBP1.72□□□□□ -2.13
PTPN3-203ENST00000412145 KRTAP5-9P26371 169 aa1.66□□□□□ -2.14
PTPN3-203ENST00000412145 FCGBPQ9Y6R7 5405 aaPredicted RBP1.65□□□□□ -2.15
PTPN3-203ENST00000412145 KRTAP4-6Q9BYQ5 205 aa1.65□□□□□ -2.15
PTPN3-203ENST00000412145 KMT2DO14686 5537 aa1.6□□□□□ -2.15
PTPN3-203ENST00000412145 KRTAP20-2Q3LI61 65 aa1.59□□□□□ -2.15
PTPN3-203ENST00000412145 USH2AO75445 5202 aa1.57□□□□□ -2.16
PTPN3-203ENST00000412145 MUC12Q9UKN1 5478 aa1.55□□□□□ -2.16
PTPN3-203ENST00000412145 NEBP20929 6669 aa1.55□□□□□ -2.16
PTPN3-203ENST00000412145 KRTAP4-11Q9BYQ6 195 aa1.54□□□□□ -2.16
PTPN3-203ENST00000412145 SSPOA2VEC9 5147 aa1.52□□□□□ -2.17
PTPN3-203ENST00000412145 KRTAP4-12Q9BQ66 201 aa1.51□□□□□ -2.17
PTPN3-203ENST00000412145 KRTAP4-2Q9BYR5 136 aa1.51□□□□□ -2.17
PTPN3-203ENST00000412145 KRTAP5-4Q6L8H1 288 aa1.48□□□□□ -2.17
PTPN3-203ENST00000412145 KRTAP4-4Q9BYR3 166 aa1.47□□□□□ -2.17
PTPN3-203ENST00000412145 MUC19Q7Z5P9 8384 aa1.46□□□□□ -2.17
PTPN3-203ENST00000412145 GPR98Q8WXG9 6306 aa1.42□□□□□ -2.18
PTPN3-203ENST00000412145 MDN1Q9NU22 5596 aa1.39□□□□□ -2.19
PTPN3-203ENST00000412145 KRTAP5-3Q6L8H2 238 aa1.38□□□□□ -2.19
PTPN3-203ENST00000412145 KRTAP5-5Q701N2 237 aaPredicted RBP1.33□□□□□ -2.2
PTPN3-203ENST00000412145 MUC5ACP98088 5654 aa1.32□□□□□ -2.2
PTPN3-203ENST00000412145 AHNAK2Q8IVF2 5795 aa1.29□□□□□ -2.2
PTPN3-203ENST00000412145 MUC5BQ9HC84 5762 aaPredicted RBP1.25□□□□□ -2.21
PTPN3-203ENST00000412145 KRTAP5-8O75690 187 aa1.25□□□□□ -2.21
PTPN3-203ENST00000412145 HMCN1Q96RW7 5635 aa1.18□□□□□ -2.22
PTPN3-203ENST00000412145 PHGR1C9JFL3 82 aa1.17□□□□□ -2.22
PTPN3-203ENST00000412145 KRTAP5-10Q6L8G5 202 aa1.13□□□□□ -2.23
PTPN3-203ENST00000412145 AHNAKQ09666 5890 aaKnown RBP1.09□□□□□ -2.24
PTPN3-203ENST00000412145 KRTAP5-2Q701N4 177 aa1.08□□□□□ -2.24
PTPN3-203ENST00000412145 KRTAP5-11Q6L8G4 156 aa1.08□□□□□ -2.24
PTPN3-203ENST00000412145 KRTAP5-7Q6L8G8 165 aa1.06□□□□□ -2.24
PTPN3-203ENST00000412145 KRTAP5-6Q6L8G9 129 aaPredicted RBP1□□□□□ -2.25
PTPN3-203ENST00000412145 KRTAP5-1Q6L8H4 278 aa0.99□□□□□ -2.25
PTPN3-203ENST00000412145 KRTAP21-1Q3LI58 79 aa0.97□□□□□ -2.25
PTPN3-203ENST00000412145 KRTAP21-2Q3LI59 83 aa0.9□□□□□ -2.27
PTPN3-203ENST00000412145 MUC16Q8WXI7 14507 aa0.7□□□□□ -2.3
Retrieved 77 of 20,778 RNA–protein pairs in 6 ms