RNA–Protein interactions for RNA: ENST00000411482.1

LMO2-203, Transcript of LIM domain only 2, humanhuman

TSL 1 (best)

Gene LMO2, Length 1,519 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO2-203ENST00000411482 MUC12Q9UKN1 5478 aa7.11□□□□□ -1.27
LMO2-203ENST00000411482 LUZP6Q538Z0 58 aa7.07□□□□□ -1.28
LMO2-203ENST00000411482 KRTAP19-7Q3SYF9 63 aa7.06□□□□□ -1.28
LMO2-203ENST00000411482 NEBP20929 6669 aa7.03□□□□□ -1.28
LMO2-203ENST00000411482 SPRR2FQ96RM1 72 aa7.03□□□□□ -1.28
LMO2-203ENST00000411482 MDN1Q9NU22 5596 aa6.97□□□□□ -1.29
LMO2-203ENST00000411482 KRTAP19-4Q3LI73 84 aa6.96□□□□□ -1.3
LMO2-203ENST00000411482 MT1EP04732 61 aa6.91□□□□□ -1.3
LMO2-203ENST00000411482 LCE3CQ5T5A8 94 aa6.91□□□□□ -1.3
LMO2-203ENST00000411482 LCE1AQ5T7P2 110 aa6.86□□□□□ -1.31
LMO2-203ENST00000411482 SPRR2EP22531 72 aa6.84□□□□□ -1.31
LMO2-203ENST00000411482 SPRR2BP35325 72 aa6.84□□□□□ -1.31
LMO2-203ENST00000411482 SPRR2AP35326 72 aa6.84□□□□□ -1.31
LMO2-203ENST00000411482 MT1LQ93083 61 aa6.82□□□□□ -1.32
LMO2-203ENST00000411482 H3BS24 57 aa6.76□□□□□ -1.33
LMO2-203ENST00000411482 KRTAP20-1Q3LI63 56 aa6.65□□□□□ -1.35
LMO2-203ENST00000411482 LCE3BQ5TA77 95 aa6.64□□□□□ -1.35
LMO2-203ENST00000411482 KRTAP2-3P0C7H8 128 aa6.6□□□□□ -1.35
LMO2-203ENST00000411482 SPRR2DP22532 72 aa6.6□□□□□ -1.35
LMO2-203ENST00000411482 KRTAP4-7Q9BYR0 210 aa6.6□□□□□ -1.35
LMO2-203ENST00000411482 KRTAP2-4Q9BYR9 128 aa6.6□□□□□ -1.35
LMO2-203ENST00000411482 KRTAP9-6A8MVA2 160 aa6.56□□□□□ -1.36
LMO2-203ENST00000411482 LCE5AQ5TCM9 118 aa6.56□□□□□ -1.36
LMO2-203ENST00000411482 KRTAP19-3Q7Z4W3 81 aa6.56□□□□□ -1.36
LMO2-203ENST00000411482 MT1GP13640 62 aa6.55□□□□□ -1.36
LMO2-203ENST00000411482 KRTAP4-12Q9BQ66 201 aa6.53□□□□□ -1.36
LMO2-203ENST00000411482 KRTAP9-9Q9BYP9 154 aa6.5□□□□□ -1.37
LMO2-203ENST00000411482 KRTAP9-4Q9BYQ2 154 aa6.5□□□□□ -1.37
LMO2-203ENST00000411482 MT1MQ8N339 61 aa6.48□□□□□ -1.37
LMO2-203ENST00000411482 KRTAP2-2Q9BYT5 123 aa6.4□□□□□ -1.38
LMO2-203ENST00000411482 KRTAP2-1Q9BYU5 128 aa6.4□□□□□ -1.38
LMO2-203ENST00000411482 A0A0A0MQY5 61 aa6.35□□□□□ -1.39
LMO2-203ENST00000411482 DSTQ03001 7570 aaKnown RBP6.33□□□□□ -1.4
LMO2-203ENST00000411482 KRTAP4-3Q9BYR4 195 aa6.33□□□□□ -1.4
LMO2-203ENST00000411482 LCE1DQ5T752 114 aa6.18□□□□□ -1.42
LMO2-203ENST00000411482 KRTAP4-9Q9BYQ8 210 aa6.04□□□□□ -1.44
LMO2-203ENST00000411482 KRTAP4-2Q9BYR5 136 aa6□□□□□ -1.45
LMO2-203ENST00000411482 INE1O15225 51 aa5.96□□□□□ -1.46
LMO2-203ENST00000411482 KRTAP5-4Q6L8H1 288 aa5.89□□□□□ -1.47
LMO2-203ENST00000411482 LCE4AQ5TA78 99 aa5.87□□□□□ -1.47
LMO2-203ENST00000411482 KRTAP5-5Q701N2 237 aaPredicted RBP5.86□□□□□ -1.47
LMO2-203ENST00000411482 MT1AP04731 61 aa5.79□□□□□ -1.48
LMO2-203ENST00000411482 MT4P47944 62 aa5.76□□□□□ -1.49
LMO2-203ENST00000411482 KRTAP4-11Q9BYQ6 195 aa5.76□□□□□ -1.49
LMO2-203ENST00000411482 KRTAP6-1Q3LI64 71 aa5.72□□□□□ -1.49
LMO2-203ENST00000411482 HMCN1Q96RW7 5635 aa5.68□□□□□ -1.5
LMO2-203ENST00000411482 KRTAP5-3Q6L8H2 238 aa5.64□□□□□ -1.51
LMO2-203ENST00000411482 SYNE1Q8NF91 8797 aaKnown RBP5.56□□□□□ -1.52
LMO2-203ENST00000411482 KRTAP20-2Q3LI61 65 aa5.51□□□□□ -1.53
LMO2-203ENST00000411482 KRTAP12-4P60329 112 aa5.5□□□□□ -1.53
LMO2-203ENST00000411482 AHNAK2Q8IVF2 5795 aa5.38□□□□□ -1.55
LMO2-203ENST00000411482 GPR98Q8WXG9 6306 aa5.37□□□□□ -1.55
LMO2-203ENST00000411482 KRTAP5-10Q6L8G5 202 aa5.24□□□□□ -1.57
LMO2-203ENST00000411482 MT3P25713 68 aa5.23□□□□□ -1.57
LMO2-203ENST00000411482 KRTAP5-2Q701N4 177 aa5.23□□□□□ -1.57
LMO2-203ENST00000411482 LCE3DQ9BYE3 92 aa5.22□□□□□ -1.57
LMO2-203ENST00000411482 KRTAP6-2Q3LI66 62 aa5.2□□□□□ -1.58
LMO2-203ENST00000411482 LCE3EQ5T5B0 92 aa5.12□□□□□ -1.59
LMO2-203ENST00000411482 KRTAP5-7Q6L8G8 165 aa4.97□□□□□ -1.61
LMO2-203ENST00000411482 OBSCNQ5VST9 7968 aa4.87□□□□□ -1.63
LMO2-203ENST00000411482 KRTAP5-8O75690 187 aa4.8□□□□□ -1.64
LMO2-203ENST00000411482 KRTAP5-1Q6L8H4 278 aa4.63□□□□□ -1.67
LMO2-203ENST00000411482 PRM1P04553 51 aa4.57□□□□□ -1.68
LMO2-203ENST00000411482 LCE1EQ5T753 118 aa4.52□□□□□ -1.69
LMO2-203ENST00000411482 MUC5ACP98088 5654 aa4.48□□□□□ -1.69
LMO2-203ENST00000411482 MUC5BQ9HC84 5762 aaPredicted RBP4.34□□□□□ -1.71
LMO2-203ENST00000411482 AHNAKQ09666 5890 aaKnown RBP4.29□□□□□ -1.72
LMO2-203ENST00000411482 LCE1CQ5T751 118 aa4.2□□□□□ -1.74
LMO2-203ENST00000411482 LCE1BQ5T7P3 118 aa4.2□□□□□ -1.74
LMO2-203ENST00000411482 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.12□□□□□ -1.75
LMO2-203ENST00000411482 KRTAP5-11Q6L8G4 156 aa3.89□□□□□ -1.79
LMO2-203ENST00000411482 KRTAP21-2Q3LI59 83 aa3.78□□□□□ -1.8
LMO2-203ENST00000411482 LCE1FQ5T754 118 aa3.57□□□□□ -1.84
LMO2-203ENST00000411482 KRTAP4-4Q9BYR3 166 aa3.44□□□□□ -1.86
LMO2-203ENST00000411482 PHGR1C9JFL3 82 aa3.25□□□□□ -1.89
LMO2-203ENST00000411482 MUC19Q7Z5P9 8384 aa3□□□□□ -1.93
LMO2-203ENST00000411482 KRTAP21-1Q3LI58 79 aa2.92□□□□□ -1.94
LMO2-203ENST00000411482 MUC16Q8WXI7 14507 aa2.12□□□□□ -2.07
Retrieved 78 of 20,778 RNA–protein pairs in 177.1 ms