RNA–Protein interactions for RNA: ENST00000410007.5

PBRM1-208, Transcript of polybromo 1, humanhuman

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Gene PBRM1, Length 4,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-208ENST00000410007 UBR4Q5T4S7 5183 aa2.92□□□□□ -1.94
PBRM1-208ENST00000410007 LCE3EQ5T5B0 92 aa2.91□□□□□ -1.94
PBRM1-208ENST00000410007 MT1MQ8N339 61 aa2.9□□□□□ -1.94
PBRM1-208ENST00000410007 RNF213Q63HN8 5207 aa2.88□□□□□ -1.95
PBRM1-208ENST00000410007 KRTAP9-7A8MTY7 169 aa2.88□□□□□ -1.95
PBRM1-208ENST00000410007 FAT4Q6V0I7 4981 aa2.87□□□□□ -1.95
PBRM1-208ENST00000410007 SYNE1Q8NF91 8797 aaKnown RBP2.85□□□□□ -1.95
PBRM1-208ENST00000410007 MT3P25713 68 aa2.83□□□□□ -1.96
PBRM1-208ENST00000410007 FSIP2Q5CZC0 6907 aa2.82□□□□□ -1.96
PBRM1-208ENST00000410007 KRTAP20-1Q3LI63 56 aa2.8□□□□□ -1.96
PBRM1-208ENST00000410007 MT4P47944 62 aa2.79□□□□□ -1.96
PBRM1-208ENST00000410007 KRTAP19-7Q3SYF9 63 aa2.78□□□□□ -1.96
PBRM1-208ENST00000410007 HMCN2Q8NDA2 5059 aa2.76□□□□□ -1.97
PBRM1-208ENST00000410007 KRTAP4-3Q9BYR4 195 aa2.75□□□□□ -1.97
PBRM1-208ENST00000410007 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.75□□□□□ -1.97
PBRM1-208ENST00000410007 KRTAP6-3Q3LI67 103 aa2.75□□□□□ -1.97
PBRM1-208ENST00000410007 LOC100996750A0A140TA64 210 aa2.74□□□□□ -1.97
PBRM1-208ENST00000410007 MT1AP04731 61 aa2.71□□□□□ -1.98
PBRM1-208ENST00000410007 MUC2Q02817 5179 aa2.7□□□□□ -1.98
PBRM1-208ENST00000410007 LCE1AQ5T7P2 110 aa2.69□□□□□ -1.98
PBRM1-208ENST00000410007 KRTAP2-3P0C7H8 128 aa2.67□□□□□ -1.98
PBRM1-208ENST00000410007 KRTAP2-4Q9BYR9 128 aa2.67□□□□□ -1.98
PBRM1-208ENST00000410007 LCE1DQ5T752 114 aa2.63□□□□□ -1.99
PBRM1-208ENST00000410007 LCE1BQ5T7P3 118 aa2.63□□□□□ -1.99
PBRM1-208ENST00000410007 SYNE2Q8WXH0 6885 aaKnown RBP2.61□□□□□ -1.99
PBRM1-208ENST00000410007 KRTAP2-1Q9BYU5 128 aa2.6□□□□□ -1.99
PBRM1-208ENST00000410007 PRM1P04553 51 aa2.59□□□□□ -1.99
PBRM1-208ENST00000410007 LCE5AQ5TCM9 118 aa2.57□□□□□ -2
PBRM1-208ENST00000410007 KRTAP2-2Q9BYT5 123 aa2.57□□□□□ -2
PBRM1-208ENST00000410007 LCE4AQ5TA78 99 aa2.53□□□□□ -2
PBRM1-208ENST00000410007 OBSCNQ5VST9 7968 aa2.53□□□□□ -2
PBRM1-208ENST00000410007 KRTAP4-9Q9BYQ8 210 aa2.51□□□□□ -2.01
PBRM1-208ENST00000410007 KRTAP6-1Q3LI64 71 aa2.5□□□□□ -2.01
PBRM1-208ENST00000410007 KRTAP9-4Q9BYQ2 154 aa2.48□□□□□ -2.01
PBRM1-208ENST00000410007 KRTAP9-6A8MVA2 160 aa2.47□□□□□ -2.01
PBRM1-208ENST00000410007 KRTAP6-2Q3LI66 62 aa2.47□□□□□ -2.01
PBRM1-208ENST00000410007 USH2AO75445 5202 aa2.41□□□□□ -2.02
PBRM1-208ENST00000410007 FCGBPQ9Y6R7 5405 aaPredicted RBP2.34□□□□□ -2.03
PBRM1-208ENST00000410007 NEBP20929 6669 aa2.33□□□□□ -2.04
PBRM1-208ENST00000410007 KRTAP5-9P26371 169 aa2.3□□□□□ -2.04
PBRM1-208ENST00000410007 SSPOA2VEC9 5147 aa2.3□□□□□ -2.04
PBRM1-208ENST00000410007 KMT2DO14686 5537 aa2.29□□□□□ -2.04
PBRM1-208ENST00000410007 DSTQ03001 7570 aaKnown RBP2.28□□□□□ -2.04
PBRM1-208ENST00000410007 MACF1Q9UPN3 7388 aaKnown RBP2.25□□□□□ -2.05
PBRM1-208ENST00000410007 LCE1CQ5T751 118 aa2.22□□□□□ -2.05
PBRM1-208ENST00000410007 LCE1EQ5T753 118 aa2.22□□□□□ -2.05
PBRM1-208ENST00000410007 LCE1FQ5T754 118 aa2.22□□□□□ -2.05
PBRM1-208ENST00000410007 GPR98Q8WXG9 6306 aa2.18□□□□□ -2.06
PBRM1-208ENST00000410007 KRTAP9-9Q9BYP9 154 aa2.16□□□□□ -2.06
PBRM1-208ENST00000410007 MDN1Q9NU22 5596 aa2.15□□□□□ -2.06
PBRM1-208ENST00000410007 KRTAP20-2Q3LI61 65 aa2.12□□□□□ -2.07
PBRM1-208ENST00000410007 KRTAP4-6Q9BYQ5 205 aa2.12□□□□□ -2.07
PBRM1-208ENST00000410007 MUC12Q9UKN1 5478 aa2.11□□□□□ -2.07
PBRM1-208ENST00000410007 MUC19Q7Z5P9 8384 aa2.03□□□□□ -2.08
PBRM1-208ENST00000410007 KRTAP5-4Q6L8H1 288 aa1.99□□□□□ -2.09
PBRM1-208ENST00000410007 KRTAP4-11Q9BYQ6 195 aa1.91□□□□□ -2.1
PBRM1-208ENST00000410007 KRTAP5-5Q701N2 237 aaPredicted RBP1.89□□□□□ -2.11
PBRM1-208ENST00000410007 KRTAP5-3Q6L8H2 238 aa1.84□□□□□ -2.12
PBRM1-208ENST00000410007 AHNAK2Q8IVF2 5795 aa1.82□□□□□ -2.12
PBRM1-208ENST00000410007 KRTAP4-12Q9BQ66 201 aa1.81□□□□□ -2.12
PBRM1-208ENST00000410007 KRTAP4-2Q9BYR5 136 aa1.81□□□□□ -2.12
PBRM1-208ENST00000410007 KRTAP4-4Q9BYR3 166 aa1.8□□□□□ -2.12
PBRM1-208ENST00000410007 HMCN1Q96RW7 5635 aa1.76□□□□□ -2.13
PBRM1-208ENST00000410007 MUC5ACP98088 5654 aa1.74□□□□□ -2.13
PBRM1-208ENST00000410007 KRTAP5-8O75690 187 aa1.61□□□□□ -2.15
PBRM1-208ENST00000410007 KRTAP5-2Q701N4 177 aa1.58□□□□□ -2.16
PBRM1-208ENST00000410007 AHNAKQ09666 5890 aaKnown RBP1.56□□□□□ -2.16
PBRM1-208ENST00000410007 KRTAP5-10Q6L8G5 202 aa1.5□□□□□ -2.17
PBRM1-208ENST00000410007 KRTAP5-7Q6L8G8 165 aa1.5□□□□□ -2.17
PBRM1-208ENST00000410007 MUC5BQ9HC84 5762 aaPredicted RBP1.45□□□□□ -2.18
PBRM1-208ENST00000410007 PHGR1C9JFL3 82 aa1.44□□□□□ -2.18
PBRM1-208ENST00000410007 KRTAP5-11Q6L8G4 156 aa1.42□□□□□ -2.18
PBRM1-208ENST00000410007 KRTAP5-1Q6L8H4 278 aa1.38□□□□□ -2.19
PBRM1-208ENST00000410007 KRTAP21-2Q3LI59 83 aa1.3□□□□□ -2.2
PBRM1-208ENST00000410007 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.27□□□□□ -2.21
PBRM1-208ENST00000410007 KRTAP21-1Q3LI58 79 aa1.11□□□□□ -2.23
PBRM1-208ENST00000410007 MUC16Q8WXI7 14507 aa0.83□□□□□ -2.28
Retrieved 77 of 20,778 RNA–protein pairs in 102.4 ms