RNA–Protein interactions for RNA: ENST00000409985.5

PMS1-205, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 1,882 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-205ENST00000409985 KRTAP4-8Q9BYQ9 185 aa8.6□□□□□ -1.03
PMS1-205ENST00000409985 KRTAP19-7Q3SYF9 63 aa8.53□□□□□ -1.04
PMS1-205ENST00000409985 INE1O15225 51 aa8.5□□□□□ -1.05
PMS1-205ENST00000409985 KRTAP9-7A8MTY7 169 aa8.4□□□□□ -1.07
PMS1-205ENST00000409985 MUC12Q9UKN1 5478 aa8.34□□□□□ -1.07
PMS1-205ENST00000409985 KRTAP6-3Q3LI67 103 aa8.34□□□□□ -1.07
PMS1-205ENST00000409985 MT1EP04732 61 aa8.31□□□□□ -1.08
PMS1-205ENST00000409985 KRTAP5-9P26371 169 aa8.3□□□□□ -1.08
PMS1-205ENST00000409985 MT1LQ93083 61 aa8.28□□□□□ -1.08
PMS1-205ENST00000409985 KRTAP9-6A8MVA2 160 aa8.25□□□□□ -1.09
PMS1-205ENST00000409985 MDN1Q9NU22 5596 aa8.21□□□□□ -1.1
PMS1-205ENST00000409985 SPRR2FQ96RM1 72 aa8.2□□□□□ -1.1
PMS1-205ENST00000409985 KRTAP2-3P0C7H8 128 aa8.1□□□□□ -1.11
PMS1-205ENST00000409985 KRTAP2-4Q9BYR9 128 aa8.1□□□□□ -1.11
PMS1-205ENST00000409985 KRTAP2-1Q9BYU5 128 aa8.1□□□□□ -1.11
PMS1-205ENST00000409985 KRTAP4-7Q9BYR0 210 aa8.09□□□□□ -1.11
PMS1-205ENST00000409985 NEBP20929 6669 aa7.98□□□□□ -1.13
PMS1-205ENST00000409985 LCE1AQ5T7P2 110 aa7.95□□□□□ -1.14
PMS1-205ENST00000409985 SPRR2EP22531 72 aa7.89□□□□□ -1.15
PMS1-205ENST00000409985 SPRR2BP35325 72 aa7.89□□□□□ -1.15
PMS1-205ENST00000409985 SPRR2AP35326 72 aa7.89□□□□□ -1.15
PMS1-205ENST00000409985 LCE3BQ5TA77 95 aa7.85□□□□□ -1.15
PMS1-205ENST00000409985 MT1GP13640 62 aa7.85□□□□□ -1.15
PMS1-205ENST00000409985 KRTAP19-3Q7Z4W3 81 aa7.82□□□□□ -1.16
PMS1-205ENST00000409985 KRTAP4-12Q9BQ66 201 aa7.77□□□□□ -1.17
PMS1-205ENST00000409985 KRTAP9-9Q9BYP9 154 aa7.77□□□□□ -1.17
PMS1-205ENST00000409985 KRTAP9-4Q9BYQ2 154 aa7.77□□□□□ -1.17
PMS1-205ENST00000409985 MT1MQ8N339 61 aa7.77□□□□□ -1.17
PMS1-205ENST00000409985 LCE5AQ5TCM9 118 aa7.75□□□□□ -1.17
PMS1-205ENST00000409985 KRTAP4-3Q9BYR4 195 aa7.62□□□□□ -1.19
PMS1-205ENST00000409985 SPRR2DP22532 72 aa7.6□□□□□ -1.19
PMS1-205ENST00000409985 DSTQ03001 7570 aaKnown RBP7.56□□□□□ -1.2
PMS1-205ENST00000409985 KRTAP20-1Q3LI63 56 aa7.37□□□□□ -1.23
PMS1-205ENST00000409985 LCE1DQ5T752 114 aa7.34□□□□□ -1.23
PMS1-205ENST00000409985 KRTAP4-9Q9BYQ8 210 aa7.2□□□□□ -1.26
PMS1-205ENST00000409985 KRTAP4-2Q9BYR5 136 aa7.17□□□□□ -1.26
PMS1-205ENST00000409985 KRTAP2-2Q9BYT5 123 aa7.17□□□□□ -1.26
PMS1-205ENST00000409985 MT1AP04731 61 aa7.04□□□□□ -1.28
PMS1-205ENST00000409985 KRTAP12-4P60329 112 aa7□□□□□ -1.29
PMS1-205ENST00000409985 KRTAP6-1Q3LI64 71 aa6.96□□□□□ -1.3
PMS1-205ENST00000409985 KRTAP5-5Q701N2 237 aaPredicted RBP6.95□□□□□ -1.3
PMS1-205ENST00000409985 KRTAP4-11Q9BYQ6 195 aa6.87□□□□□ -1.31
PMS1-205ENST00000409985 KRTAP5-4Q6L8H1 288 aa6.83□□□□□ -1.32
PMS1-205ENST00000409985 LCE4AQ5TA78 99 aa6.71□□□□□ -1.34
PMS1-205ENST00000409985 KRTAP5-3Q6L8H2 238 aa6.7□□□□□ -1.34
PMS1-205ENST00000409985 LCE3DQ9BYE3 92 aa6.68□□□□□ -1.34
PMS1-205ENST00000409985 MT4P47944 62 aa6.66□□□□□ -1.34
PMS1-205ENST00000409985 HMCN1Q96RW7 5635 aa6.64□□□□□ -1.35
PMS1-205ENST00000409985 SYNE1Q8NF91 8797 aaKnown RBP6.64□□□□□ -1.35
PMS1-205ENST00000409985 LCE3EQ5T5B0 92 aa6.61□□□□□ -1.35
PMS1-205ENST00000409985 KRTAP20-2Q3LI61 65 aa6.39□□□□□ -1.39
PMS1-205ENST00000409985 MT3P25713 68 aa6.34□□□□□ -1.39
PMS1-205ENST00000409985 KRTAP6-2Q3LI66 62 aa6.24□□□□□ -1.41
PMS1-205ENST00000409985 PRM1P04553 51 aa6.13□□□□□ -1.43
PMS1-205ENST00000409985 KRTAP5-2Q701N4 177 aa6.11□□□□□ -1.43
PMS1-205ENST00000409985 AHNAK2Q8IVF2 5795 aa6.09□□□□□ -1.43
PMS1-205ENST00000409985 OBSCNQ5VST9 7968 aa5.88□□□□□ -1.47
PMS1-205ENST00000409985 GPR98Q8WXG9 6306 aa5.84□□□□□ -1.47
PMS1-205ENST00000409985 KRTAP5-10Q6L8G5 202 aa5.82□□□□□ -1.48
PMS1-205ENST00000409985 KRTAP5-8O75690 187 aa5.49□□□□□ -1.53
PMS1-205ENST00000409985 KRTAP5-7Q6L8G8 165 aa5.43□□□□□ -1.54
PMS1-205ENST00000409985 KRTAP5-1Q6L8H4 278 aa5.39□□□□□ -1.55
PMS1-205ENST00000409985 LCE1EQ5T753 118 aa5.32□□□□□ -1.56
PMS1-205ENST00000409985 MUC5ACP98088 5654 aa5.24□□□□□ -1.57
PMS1-205ENST00000409985 LCE1BQ5T7P3 118 aa4.99□□□□□ -1.61
PMS1-205ENST00000409985 LCE1CQ5T751 118 aa4.97□□□□□ -1.61
PMS1-205ENST00000409985 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.94□□□□□ -1.62
PMS1-205ENST00000409985 MUC5BQ9HC84 5762 aaPredicted RBP4.93□□□□□ -1.62
PMS1-205ENST00000409985 AHNAKQ09666 5890 aaKnown RBP4.74□□□□□ -1.65
PMS1-205ENST00000409985 KRTAP5-11Q6L8G4 156 aa4.66□□□□□ -1.66
PMS1-205ENST00000409985 KRTAP21-2Q3LI59 83 aa4.56□□□□□ -1.68
PMS1-205ENST00000409985 KRTAP4-4Q9BYR3 166 aa4.12□□□□□ -1.75
PMS1-205ENST00000409985 LCE1FQ5T754 118 aa4.06□□□□□ -1.76
PMS1-205ENST00000409985 KRTAP21-1Q3LI58 79 aa3.96□□□□□ -1.77
PMS1-205ENST00000409985 PHGR1C9JFL3 82 aa3.82□□□□□ -1.8
PMS1-205ENST00000409985 MUC19Q7Z5P9 8384 aa3.55□□□□□ -1.84
PMS1-205ENST00000409985 MUC16Q8WXI7 14507 aa2.47□□□□□ -2.01
Retrieved 77 of 20,778 RNA–protein pairs in 13.3 ms