RNA–Protein interactions for RNA: ENST00000409953.5

UBE2F-204, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 3 BASIC

Gene UBE2F, Length 924 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-204ENST00000409953 SMIM11BQ8TCY0 68 aa3.14□□□□□ -1.91
UBE2F-204ENST00000409953 SPRR1AP35321 89 aa3.13□□□□□ -1.91
UBE2F-204ENST00000409953 AHNAKQ09666 5890 aaKnown RBP3.12□□□□□ -1.91
UBE2F-204ENST00000409953 MT4P47944 62 aa3.12□□□□□ -1.91
UBE2F-204ENST00000409953 KRTAP19-8Q3LI54 63 aa3.1□□□□□ -1.91
UBE2F-204ENST00000409953 LCE1FQ5T754 118 aa3.09□□□□□ -1.91
UBE2F-204ENST00000409953 Q8N9L7 120 aa3.09□□□□□ -1.91
UBE2F-204ENST00000409953 Q6ZRX8 168 aa3.08□□□□□ -1.92
UBE2F-204ENST00000409953 CDKN2A-AS1Q9UH64 79 aa3.08□□□□□ -1.92
UBE2F-204ENST00000409953 IGFL1Q6UW32 110 aa3.06□□□□□ -1.92
UBE2F-204ENST00000409953 PLAC4Q8WY50 150 aa3.06□□□□□ -1.92
UBE2F-204ENST00000409953 LCE1EQ5T753 118 aa3.03□□□□□ -1.92
UBE2F-204ENST00000409953 KRTAP10-7P60409 375 aaPredicted RBP3.01□□□□□ -1.93
UBE2F-204ENST00000409953 LINC00575Q6W349 94 aa3.01□□□□□ -1.93
UBE2F-204ENST00000409953 SPRR1BP22528 89 aa3□□□□□ -1.93
UBE2F-204ENST00000409953 SPRR2GQ9BYE4 73 aa2.99□□□□□ -1.93
UBE2F-204ENST00000409953 KRTAP10-12P60413 245 aa2.98□□□□□ -1.93
UBE2F-204ENST00000409953 MUC5ACP98088 5654 aa2.98□□□□□ -1.93
UBE2F-204ENST00000409953 TP53AIP1Q9HCN2 124 aa2.97□□□□□ -1.93
UBE2F-204ENST00000409953 MUC5BQ9HC84 5762 aaPredicted RBP2.96□□□□□ -1.94
UBE2F-204ENST00000409953 DSCR10P59022 87 aa2.96□□□□□ -1.94
UBE2F-204ENST00000409953 KRTAP12-2P59991 146 aa2.95□□□□□ -1.94
UBE2F-204ENST00000409953 PP632Q6XCG6 107 aa2.95□□□□□ -1.94
UBE2F-204ENST00000409953 K7EQZ3 153 aa2.94□□□□□ -1.94
UBE2F-204ENST00000409953 CRIPTQ9P021 101 aa2.93□□□□□ -1.94
UBE2F-204ENST00000409953 KRTAP5-11Q6L8G4 156 aa2.89□□□□□ -1.95
UBE2F-204ENST00000409953 DEFB105AQ8NG35 78 aa2.89□□□□□ -1.95
UBE2F-204ENST00000409953 H0YAA0 97 aa2.88□□□□□ -1.95
UBE2F-204ENST00000409953 MRPL34Q9BQ48 92 aaKnown RBP2.88□□□□□ -1.95
UBE2F-204ENST00000409953 IGLV5-48A0A075B6I7 105 aa2.87□□□□□ -1.95
UBE2F-204ENST00000409953 MT1XP80297 61 aa2.86□□□□□ -1.95
UBE2F-204ENST00000409953 WFDC13Q8IUB5 93 aa2.86□□□□□ -1.95
UBE2F-204ENST00000409953 LCE3CQ5T5A8 94 aa2.85□□□□□ -1.95
UBE2F-204ENST00000409953 H1FX-AS1Q4G0G2 97 aa2.81□□□□□ -1.96
UBE2F-204ENST00000409953 KRTAP5-4Q6L8H1 288 aa2.81□□□□□ -1.96
UBE2F-204ENST00000409953 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.78□□□□□ -1.96
UBE2F-204ENST00000409953 C10orf95Q9H7T3 257 aa2.75□□□□□ -1.97
UBE2F-204ENST00000409953 MMP24-AS1A0A0U1RRL7 71 aa2.73□□□□□ -1.97
UBE2F-204ENST00000409953 KRTAP9-6A8MVA2 160 aa2.72□□□□□ -1.97
UBE2F-204ENST00000409953 KRTAP20-2Q3LI61 65 aa2.72□□□□□ -1.97
UBE2F-204ENST00000409953 KRTAP19-3Q7Z4W3 81 aa2.71□□□□□ -1.98
UBE2F-204ENST00000409953 KRTAP5-8O75690 187 aa2.68□□□□□ -1.98
UBE2F-204ENST00000409953 KRTAP13-4Q3LI77 160 aa2.67□□□□□ -1.98
UBE2F-204ENST00000409953 LCE3EQ5T5B0 92 aa2.6□□□□□ -1.99
UBE2F-204ENST00000409953 MT1EP04732 61 aa2.58□□□□□ -2
UBE2F-204ENST00000409953 KRTAP19-7Q3SYF9 63 aa2.56□□□□□ -2
UBE2F-204ENST00000409953 MT1GP13640 62 aa2.54□□□□□ -2
UBE2F-204ENST00000409953 S4R3F8 94 aa2.53□□□□□ -2
UBE2F-204ENST00000409953 MT1MQ8N339 61 aa2.51□□□□□ -2.01
UBE2F-204ENST00000409953 KRTAP5-2Q701N4 177 aa2.5□□□□□ -2.01
UBE2F-204ENST00000409953 KRTAP4-3Q9BYR4 195 aa2.5□□□□□ -2.01
UBE2F-204ENST00000409953 KRTAP12-4P60329 112 aa2.49□□□□□ -2.01
UBE2F-204ENST00000409953 SYNE1Q8NF91 8797 aaKnown RBP2.49□□□□□ -2.01
UBE2F-204ENST00000409953 KRTAP5-1Q6L8H4 278 aa2.41□□□□□ -2.02
UBE2F-204ENST00000409953 KRTAP12-1P59990 96 aa2.37□□□□□ -2.03
UBE2F-204ENST00000409953 KRTAP5-5Q701N2 237 aaPredicted RBP2.36□□□□□ -2.03
UBE2F-204ENST00000409953 OBSCNQ5VST9 7968 aa2.34□□□□□ -2.03
UBE2F-204ENST00000409953 MT1LQ93083 61 aa2.34□□□□□ -2.03
UBE2F-204ENST00000409953 A0A0D9SG42 100 aa2.32□□□□□ -2.04
UBE2F-204ENST00000409953 KRTAP19-5Q3LI72 72 aa2.31□□□□□ -2.04
UBE2F-204ENST00000409953 LCE3AQ5TA76 89 aa2.27□□□□□ -2.05
UBE2F-204ENST00000409953 KRTAP4-4Q9BYR3 166 aa2.27□□□□□ -2.05
UBE2F-204ENST00000409953 M0QZ58 72 aa2.25□□□□□ -2.05
UBE2F-204ENST00000409953 LCE3DQ9BYE3 92 aa2.17□□□□□ -2.06
UBE2F-204ENST00000409953 KRTAP6-2Q3LI66 62 aa2.08□□□□□ -2.08
UBE2F-204ENST00000409953 PHGR1C9JFL3 82 aa2.02□□□□□ -2.09
UBE2F-204ENST00000409953 KRTAP6-1Q3LI64 71 aa2.02□□□□□ -2.09
UBE2F-204ENST00000409953 LCE1CQ5T751 118 aa2.01□□□□□ -2.09
UBE2F-204ENST00000409953 LCE1BQ5T7P3 118 aa2.01□□□□□ -2.09
UBE2F-204ENST00000409953 MT1AP04731 61 aa1.97□□□□□ -2.09
UBE2F-204ENST00000409953 TNP1P09430 55 aa1.96□□□□□ -2.1
UBE2F-204ENST00000409953 KRTAP12-3P60328 96 aa1.93□□□□□ -2.1
UBE2F-204ENST00000409953 PRM1P04553 51 aa1.62□□□□□ -2.15
UBE2F-204ENST00000409953 MUC19Q7Z5P9 8384 aa1.58□□□□□ -2.16
UBE2F-204ENST00000409953 KRTAP21-1Q3LI58 79 aa1.54□□□□□ -2.16
UBE2F-204ENST00000409953 KRTAP21-2Q3LI59 83 aa1.4□□□□□ -2.19
UBE2F-204ENST00000409953 MUC16Q8WXI7 14507 aa1.03□□□□□ -2.25
Retrieved 77 of 20,778 RNA–protein pairs in 72.9 ms