RNA–Protein interactions for RNA: ENST00000409782.5

LSM5-203, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 649 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-203ENST00000409782 LINC00208Q96KT6 92 aa2.6□□□□□ -1.99
LSM5-203ENST00000409782 A6NN06 94 aa2.59□□□□□ -1.99
LSM5-203ENST00000409782 KRTAP5-8O75690 187 aa2.59□□□□□ -1.99
LSM5-203ENST00000409782 KRTAP6-3Q3LI67 103 aa2.58□□□□□ -2
LSM5-203ENST00000409782 KRTAP13-4Q3LI77 160 aa2.55□□□□□ -2
LSM5-203ENST00000409782 DMAC1Q96GE9 116 aa2.55□□□□□ -2
LSM5-203ENST00000409782 COA5Q86WW8 74 aa2.54□□□□□ -2
LSM5-203ENST00000409782 C20orf197Q8N268 126 aa2.54□□□□□ -2
LSM5-203ENST00000409782 SERP2Q8N6R1 65 aa2.52□□□□□ -2.01
LSM5-203ENST00000409782 MUC12Q9UKN1 5478 aa2.51□□□□□ -2.01
LSM5-203ENST00000409782 SNURFQ9Y675 71 aa2.49□□□□□ -2.01
LSM5-203ENST00000409782 COX7CP15954 63 aa2.48□□□□□ -2.01
LSM5-203ENST00000409782 KMT2DO14686 5537 aa2.48□□□□□ -2.01
LSM5-203ENST00000409782 M0QZ58 72 aa2.47□□□□□ -2.01
LSM5-203ENST00000409782 ACYP2P14621 99 aa2.47□□□□□ -2.01
LSM5-203ENST00000409782 SPTSSBQ8NFR3 76 aa2.47□□□□□ -2.01
LSM5-203ENST00000409782 MDN1Q9NU22 5596 aa2.46□□□□□ -2.02
LSM5-203ENST00000409782 CHKB-CPT1BH3BT56 60 aa2.46□□□□□ -2.02
LSM5-203ENST00000409782 PLAC4Q8WY50 150 aa2.46□□□□□ -2.02
LSM5-203ENST00000409782 CYSTM1Q9H1C7 97 aa2.46□□□□□ -2.02
LSM5-203ENST00000409782 MT1XP80297 61 aa2.45□□□□□ -2.02
LSM5-203ENST00000409782 MIR22HGQ0VDD5 57 aa2.44□□□□□ -2.02
LSM5-203ENST00000409782 KRTAP12-1P59990 96 aa2.41□□□□□ -2.02
LSM5-203ENST00000409782 CCDC179H3BU77 68 aa2.4□□□□□ -2.03
LSM5-203ENST00000409782 H7BZZ5 65 aa2.39□□□□□ -2.03
LSM5-203ENST00000409782 KRTAP20-1Q3LI63 56 aa2.37□□□□□ -2.03
LSM5-203ENST00000409782 KRTAP8-1Q8IUC2 63 aa2.37□□□□□ -2.03
LSM5-203ENST00000409782 SPRR2FQ96RM1 72 aa2.37□□□□□ -2.03
LSM5-203ENST00000409782 ATP5EP56381 51 aaPredicted RBP2.36□□□□□ -2.03
LSM5-203ENST00000409782 SERP1Q9Y6X1 66 aa2.36□□□□□ -2.03
LSM5-203ENST00000409782 SPRR2EP22531 72 aa2.34□□□□□ -2.03
LSM5-203ENST00000409782 SPRR2BP35325 72 aa2.34□□□□□ -2.03
LSM5-203ENST00000409782 SPRR2AP35326 72 aa2.34□□□□□ -2.03
LSM5-203ENST00000409782 INE1O15225 51 aa2.33□□□□□ -2.04
LSM5-203ENST00000409782 CDC42SE1Q9NRR8 79 aa2.32□□□□□ -2.04
LSM5-203ENST00000409782 KRTAP2-3P0C7H8 128 aa2.3□□□□□ -2.04
LSM5-203ENST00000409782 KRTAP12-3P60328 96 aa2.3□□□□□ -2.04
LSM5-203ENST00000409782 KRTAP2-4Q9BYR9 128 aa2.3□□□□□ -2.04
LSM5-203ENST00000409782 A0A1B0GU69 56 aa2.28□□□□□ -2.04
LSM5-203ENST00000409782 PRR15LQ9BU68 103 aa2.27□□□□□ -2.05
LSM5-203ENST00000409782 SPRR2DP22532 72 aa2.26□□□□□ -2.05
LSM5-203ENST00000409782 A0A0D9SG42 100 aa2.24□□□□□ -2.05
LSM5-203ENST00000409782 SPATA8Q6RVD6 105 aa2.24□□□□□ -2.05
LSM5-203ENST00000409782 KRTAP2-1Q9BYU5 128 aa2.23□□□□□ -2.05
LSM5-203ENST00000409782 LINC01558Q9Y6Z2 57 aa2.22□□□□□ -2.05
LSM5-203ENST00000409782 KRTAP5-7Q6L8G8 165 aa2.21□□□□□ -2.06
LSM5-203ENST00000409782 KRTAP12-4P60329 112 aa2.19□□□□□ -2.06
LSM5-203ENST00000409782 KRTAP19-7Q3SYF9 63 aa2.19□□□□□ -2.06
LSM5-203ENST00000409782 GPR98Q8WXG9 6306 aa2.18□□□□□ -2.06
LSM5-203ENST00000409782 MT1EP04732 61 aa2.18□□□□□ -2.06
LSM5-203ENST00000409782 MUC19Q7Z5P9 8384 aa2.18□□□□□ -2.06
LSM5-203ENST00000409782 UQCR11O14957 56 aa2.17□□□□□ -2.06
LSM5-203ENST00000409782 KRTAP19-3Q7Z4W3 81 aa2.17□□□□□ -2.06
LSM5-203ENST00000409782 DSTQ03001 7570 aaKnown RBP2.16□□□□□ -2.06
LSM5-203ENST00000409782 KRTAP19-5Q3LI72 72 aa2.13□□□□□ -2.07
LSM5-203ENST00000409782 TNP1P09430 55 aa2.12□□□□□ -2.07
LSM5-203ENST00000409782 C10orf95Q9H7T3 257 aa2.11□□□□□ -2.07
LSM5-203ENST00000409782 MT1GP13640 62 aa2.1□□□□□ -2.07
LSM5-203ENST00000409782 MT1LQ93083 61 aa2.08□□□□□ -2.08
LSM5-203ENST00000409782 MT1MQ8N339 61 aa2.07□□□□□ -2.08
LSM5-203ENST00000409782 HMCN1Q96RW7 5635 aa2.04□□□□□ -2.08
LSM5-203ENST00000409782 AHNAK2Q8IVF2 5795 aa2□□□□□ -2.09
LSM5-203ENST00000409782 MT4P47944 62 aa1.96□□□□□ -2.1
LSM5-203ENST00000409782 KRTAP21-2Q3LI59 83 aa1.89□□□□□ -2.11
LSM5-203ENST00000409782 KRTAP20-2Q3LI61 65 aa1.86□□□□□ -2.11
LSM5-203ENST00000409782 SYNE1Q8NF91 8797 aaKnown RBP1.86□□□□□ -2.11
LSM5-203ENST00000409782 KRTAP5-10Q6L8G5 202 aa1.85□□□□□ -2.11
LSM5-203ENST00000409782 MT1AP04731 61 aa1.78□□□□□ -2.12
LSM5-203ENST00000409782 KRTAP6-1Q3LI64 71 aa1.74□□□□□ -2.13
LSM5-203ENST00000409782 AHNAKQ09666 5890 aaKnown RBP1.71□□□□□ -2.14
LSM5-203ENST00000409782 KRTAP6-2Q3LI66 62 aa1.67□□□□□ -2.14
LSM5-203ENST00000409782 MUC5BQ9HC84 5762 aaPredicted RBP1.64□□□□□ -2.15
LSM5-203ENST00000409782 MUC5ACP98088 5654 aa1.63□□□□□ -2.15
LSM5-203ENST00000409782 PHGR1C9JFL3 82 aa1.09□□□□□ -2.23
LSM5-203ENST00000409782 PRM1P04553 51 aa1□□□□□ -2.25
LSM5-203ENST00000409782 MUC16Q8WXI7 14507 aa0.95□□□□□ -2.26
LSM5-203ENST00000409782 KRTAP21-1Q3LI58 79 aa0.84□□□□□ -2.27
Retrieved 77 of 20,778 RNA–protein pairs in 96.7 ms