RNA–Protein interactions for RNA: ENST00000409767.5

PBRM1-207, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 4,849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-207ENST00000409767 MT1GP13640 62 aa2.28□□□□□ -2.04
PBRM1-207ENST00000409767 LCE3BQ5TA77 95 aa2.25□□□□□ -2.05
PBRM1-207ENST00000409767 LOC100996750A0A140TA64 210 aa2.25□□□□□ -2.05
PBRM1-207ENST00000409767 KRTAP4-6Q9BYQ5 205 aa2.25□□□□□ -2.05
PBRM1-207ENST00000409767 KRTAP4-8A0A0G2JLE6 195 aa2.22□□□□□ -2.05
PBRM1-207ENST00000409767 KRTAP12-4P60329 112 aa2.22□□□□□ -2.05
PBRM1-207ENST00000409767 KRTAP4-8Q9BYQ9 185 aa2.22□□□□□ -2.05
PBRM1-207ENST00000409767 KRTAP2-2Q9BYT5 123 aa2.21□□□□□ -2.05
PBRM1-207ENST00000409767 KRTAP2-1Q9BYU5 128 aa2.21□□□□□ -2.05
PBRM1-207ENST00000409767 SYNE2Q8WXH0 6885 aaKnown RBP2.21□□□□□ -2.06
PBRM1-207ENST00000409767 LCE1AQ5T7P2 110 aa2.2□□□□□ -2.06
PBRM1-207ENST00000409767 KRTAP19-3Q7Z4W3 81 aa2.19□□□□□ -2.06
PBRM1-207ENST00000409767 SPRR5A0A1B0GTR4 108 aa2.15□□□□□ -2.07
PBRM1-207ENST00000409767 MUC2Q02817 5179 aa2.13□□□□□ -2.07
PBRM1-207ENST00000409767 MT1EP04732 61 aa2.13□□□□□ -2.07
PBRM1-207ENST00000409767 MT1LQ93083 61 aa2.13□□□□□ -2.07
PBRM1-207ENST00000409767 MT4P47944 62 aa2.11□□□□□ -2.07
PBRM1-207ENST00000409767 USH2AO75445 5202 aa2.1□□□□□ -2.07
PBRM1-207ENST00000409767 SSPOA2VEC9 5147 aa2.09□□□□□ -2.07
PBRM1-207ENST00000409767 KRTAP5-9P26371 169 aa2.07□□□□□ -2.08
PBRM1-207ENST00000409767 LCE4AQ5TA78 99 aa2.06□□□□□ -2.08
PBRM1-207ENST00000409767 MT1MQ8N339 61 aa2.06□□□□□ -2.08
PBRM1-207ENST00000409767 NEBP20929 6669 aa2.05□□□□□ -2.08
PBRM1-207ENST00000409767 FCGBPQ9Y6R7 5405 aaPredicted RBP2.04□□□□□ -2.08
PBRM1-207ENST00000409767 LCE3DQ9BYE3 92 aa2.01□□□□□ -2.09
PBRM1-207ENST00000409767 MT3P25713 68 aa2□□□□□ -2.09
PBRM1-207ENST00000409767 MACF1Q9UPN3 7388 aaKnown RBP2□□□□□ -2.09
PBRM1-207ENST00000409767 KRTAP19-7Q3SYF9 63 aa1.98□□□□□ -2.09
PBRM1-207ENST00000409767 LCE3EQ5T5B0 92 aa1.98□□□□□ -2.09
PBRM1-207ENST00000409767 KRTAP4-9Q9BYQ8 210 aa1.98□□□□□ -2.09
PBRM1-207ENST00000409767 LCE5AQ5TCM9 118 aa1.96□□□□□ -2.1
PBRM1-207ENST00000409767 KRTAP4-7Q9BYR0 210 aa1.95□□□□□ -2.1
PBRM1-207ENST00000409767 MT1AP04731 61 aa1.93□□□□□ -2.1
PBRM1-207ENST00000409767 KMT2DO14686 5537 aa1.92□□□□□ -2.1
PBRM1-207ENST00000409767 KRTAP4-3Q9BYR4 195 aa1.89□□□□□ -2.11
PBRM1-207ENST00000409767 GPR98Q8WXG9 6306 aa1.88□□□□□ -2.11
PBRM1-207ENST00000409767 SYNE1Q8NF91 8797 aaKnown RBP1.87□□□□□ -2.11
PBRM1-207ENST00000409767 KRTAP9-9Q9BYP9 154 aa1.85□□□□□ -2.11
PBRM1-207ENST00000409767 KRTAP9-4Q9BYQ2 154 aa1.85□□□□□ -2.11
PBRM1-207ENST00000409767 OBSCNQ5VST9 7968 aa1.84□□□□□ -2.11
PBRM1-207ENST00000409767 LCE1DQ5T752 114 aa1.84□□□□□ -2.11
PBRM1-207ENST00000409767 MDN1Q9NU22 5596 aa1.81□□□□□ -2.12
PBRM1-207ENST00000409767 KRTAP4-12Q9BQ66 201 aa1.8□□□□□ -2.12
PBRM1-207ENST00000409767 KRTAP9-6A8MVA2 160 aa1.78□□□□□ -2.13
PBRM1-207ENST00000409767 KRTAP4-2Q9BYR5 136 aa1.78□□□□□ -2.13
PBRM1-207ENST00000409767 LCE1BQ5T7P3 118 aa1.77□□□□□ -2.13
PBRM1-207ENST00000409767 KRTAP6-1Q3LI64 71 aa1.73□□□□□ -2.13
PBRM1-207ENST00000409767 DSTQ03001 7570 aaKnown RBP1.73□□□□□ -2.13
PBRM1-207ENST00000409767 KRTAP20-2Q3LI61 65 aa1.71□□□□□ -2.14
PBRM1-207ENST00000409767 KRTAP6-2Q3LI66 62 aa1.71□□□□□ -2.14
PBRM1-207ENST00000409767 KRTAP5-3Q6L8H2 238 aa1.71□□□□□ -2.14
PBRM1-207ENST00000409767 KRTAP5-4Q6L8H1 288 aa1.7□□□□□ -2.14
PBRM1-207ENST00000409767 HMCN1Q96RW7 5635 aa1.69□□□□□ -2.14
PBRM1-207ENST00000409767 PRM1P04553 51 aa1.69□□□□□ -2.14
PBRM1-207ENST00000409767 MUC12Q9UKN1 5478 aa1.68□□□□□ -2.14
PBRM1-207ENST00000409767 MUC19Q7Z5P9 8384 aa1.62□□□□□ -2.15
PBRM1-207ENST00000409767 KRTAP4-11Q9BYQ6 195 aa1.6□□□□□ -2.15
PBRM1-207ENST00000409767 AHNAK2Q8IVF2 5795 aa1.55□□□□□ -2.16
PBRM1-207ENST00000409767 LCE1CQ5T751 118 aa1.51□□□□□ -2.17
PBRM1-207ENST00000409767 LCE1EQ5T753 118 aa1.51□□□□□ -2.17
PBRM1-207ENST00000409767 LCE1FQ5T754 118 aa1.51□□□□□ -2.17
PBRM1-207ENST00000409767 KRTAP5-5Q701N2 237 aaPredicted RBP1.5□□□□□ -2.17
PBRM1-207ENST00000409767 KRTAP5-7Q6L8G8 165 aa1.45□□□□□ -2.18
PBRM1-207ENST00000409767 MUC5BQ9HC84 5762 aaPredicted RBP1.44□□□□□ -2.18
PBRM1-207ENST00000409767 KRTAP5-10Q6L8G5 202 aa1.44□□□□□ -2.18
PBRM1-207ENST00000409767 KRTAP5-8O75690 187 aa1.42□□□□□ -2.18
PBRM1-207ENST00000409767 AHNAKQ09666 5890 aaKnown RBP1.4□□□□□ -2.19
PBRM1-207ENST00000409767 KRTAP5-2Q701N4 177 aa1.37□□□□□ -2.19
PBRM1-207ENST00000409767 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.36□□□□□ -2.19
PBRM1-207ENST00000409767 MUC5ACP98088 5654 aa1.36□□□□□ -2.19
PBRM1-207ENST00000409767 KRTAP5-1Q6L8H4 278 aa1.21□□□□□ -2.22
PBRM1-207ENST00000409767 PHGR1C9JFL3 82 aa1.19□□□□□ -2.22
PBRM1-207ENST00000409767 KRTAP4-4Q9BYR3 166 aa1.18□□□□□ -2.22
PBRM1-207ENST00000409767 KRTAP5-11Q6L8G4 156 aa1.16□□□□□ -2.22
PBRM1-207ENST00000409767 KRTAP21-2Q3LI59 83 aa0.97□□□□□ -2.25
PBRM1-207ENST00000409767 KRTAP21-1Q3LI58 79 aa0.91□□□□□ -2.26
PBRM1-207ENST00000409767 MUC16Q8WXI7 14507 aa0.68□□□□□ -2.3
Retrieved 77 of 20,778 RNA–protein pairs in 298.7 ms