RNA–Protein interactions for RNA: ENST00000409643.5

PSMD1-203, Transcript of proteasome 26S subunit, non-ATPase 1, humanhuman

TSL 5 BASIC

Gene PSMD1, Length 2,901 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD1-203ENST00000409643 MT1GP13640 62 aa3.68□□□□□ -1.82
PSMD1-203ENST00000409643 KRTAP19-3Q7Z4W3 81 aa3.67□□□□□ -1.82
PSMD1-203ENST00000409643 MT1MQ8N339 61 aa3.64□□□□□ -1.83
PSMD1-203ENST00000409643 KRTAP4-3Q9BYR4 195 aa3.57□□□□□ -1.84
PSMD1-203ENST00000409643 LCE5AQ5TCM9 118 aa3.55□□□□□ -1.84
PSMD1-203ENST00000409643 FCGBPQ9Y6R7 5405 aaPredicted RBP3.54□□□□□ -1.84
PSMD1-203ENST00000409643 LOC100996750A0A140TA64 210 aa3.54□□□□□ -1.84
PSMD1-203ENST00000409643 SPRR2FQ96RM1 72 aa3.52□□□□□ -1.85
PSMD1-203ENST00000409643 FSIP2Q5CZC0 6907 aa3.51□□□□□ -1.85
PSMD1-203ENST00000409643 MUC12Q9UKN1 5478 aa3.43□□□□□ -1.86
PSMD1-203ENST00000409643 CRCT1Q9UGL9 99 aa3.43□□□□□ -1.86
PSMD1-203ENST00000409643 KRTAP5-9P26371 169 aa3.37□□□□□ -1.87
PSMD1-203ENST00000409643 KRTAP9-2Q9BYQ4 174 aa3.33□□□□□ -1.88
PSMD1-203ENST00000409643 LCE1AQ5T7P2 110 aa3.32□□□□□ -1.88
PSMD1-203ENST00000409643 MACF1Q9UPN3 7388 aaKnown RBP3.31□□□□□ -1.88
PSMD1-203ENST00000409643 MT1AP04731 61 aa3.3□□□□□ -1.88
PSMD1-203ENST00000409643 KRTAP12-4P60329 112 aa3.28□□□□□ -1.88
PSMD1-203ENST00000409643 LCE3BQ5TA77 95 aa3.27□□□□□ -1.89
PSMD1-203ENST00000409643 KRTAP6-1Q3LI64 71 aa3.26□□□□□ -1.89
PSMD1-203ENST00000409643 KRTAP5-5Q701N2 237 aaPredicted RBP3.24□□□□□ -1.89
PSMD1-203ENST00000409643 SPRR2EP22531 72 aa3.23□□□□□ -1.89
PSMD1-203ENST00000409643 SPRR2BP35325 72 aa3.23□□□□□ -1.89
PSMD1-203ENST00000409643 SPRR2AP35326 72 aa3.23□□□□□ -1.89
PSMD1-203ENST00000409643 DSTQ03001 7570 aaKnown RBP3.2□□□□□ -1.9
PSMD1-203ENST00000409643 LCE3DQ9BYE3 92 aa3.14□□□□□ -1.91
PSMD1-203ENST00000409643 SYNE2Q8WXH0 6885 aaKnown RBP3.14□□□□□ -1.91
PSMD1-203ENST00000409643 KRTAP4-9Q9BYQ8 210 aa3.13□□□□□ -1.91
PSMD1-203ENST00000409643 KRTAP6-3Q3LI67 103 aa3.11□□□□□ -1.91
PSMD1-203ENST00000409643 MDN1Q9NU22 5596 aa3.11□□□□□ -1.91
PSMD1-203ENST00000409643 SPRR2DP22532 72 aa3.11□□□□□ -1.91
PSMD1-203ENST00000409643 LCE3EQ5T5B0 92 aa3.1□□□□□ -1.91
PSMD1-203ENST00000409643 KRTAP9-4Q9BYQ2 154 aa3.1□□□□□ -1.91
PSMD1-203ENST00000409643 SYNE1Q8NF91 8797 aaKnown RBP3.05□□□□□ -1.92
PSMD1-203ENST00000409643 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.03□□□□□ -1.92
PSMD1-203ENST00000409643 KRTAP4-6Q9BYQ5 205 aa2.99□□□□□ -1.93
PSMD1-203ENST00000409643 MT3P25713 68 aa2.98□□□□□ -1.93
PSMD1-203ENST00000409643 KRTAP6-2Q3LI66 62 aa2.93□□□□□ -1.94
PSMD1-203ENST00000409643 KRTAP9-6A0A140TA67 174 aa2.92□□□□□ -1.94
PSMD1-203ENST00000409643 KRTAP5-4Q6L8H1 288 aa2.91□□□□□ -1.94
PSMD1-203ENST00000409643 KRTAP9-7A8MTY7 169 aa2.88□□□□□ -1.95
PSMD1-203ENST00000409643 PRM1P04553 51 aa2.88□□□□□ -1.95
PSMD1-203ENST00000409643 LCE4AQ5TA78 99 aa2.78□□□□□ -1.96
PSMD1-203ENST00000409643 NEBP20929 6669 aa2.75□□□□□ -1.97
PSMD1-203ENST00000409643 KRTAP5-2Q701N4 177 aa2.71□□□□□ -1.98
PSMD1-203ENST00000409643 KRTAP20-2Q3LI61 65 aa2.7□□□□□ -1.98
PSMD1-203ENST00000409643 MT4P47944 62 aa2.68□□□□□ -1.98
PSMD1-203ENST00000409643 OBSCNQ5VST9 7968 aa2.65□□□□□ -1.99
PSMD1-203ENST00000409643 KRTAP20-1Q3LI63 56 aa2.61□□□□□ -1.99
PSMD1-203ENST00000409643 KRTAP2-2Q9BYT5 123 aa2.61□□□□□ -1.99
PSMD1-203ENST00000409643 KRTAP5-3Q6L8H2 238 aa2.58□□□□□ -2
PSMD1-203ENST00000409643 LCE1DQ5T752 114 aa2.56□□□□□ -2
PSMD1-203ENST00000409643 LCE1EQ5T753 118 aa2.49□□□□□ -2.01
PSMD1-203ENST00000409643 HMCN1Q96RW7 5635 aa2.48□□□□□ -2.01
PSMD1-203ENST00000409643 KRTAP9-9Q9BYP9 154 aa2.38□□□□□ -2.03
PSMD1-203ENST00000409643 MUC5ACP98088 5654 aa2.37□□□□□ -2.03
PSMD1-203ENST00000409643 KRTAP5-10Q6L8G5 202 aa2.34□□□□□ -2.04
PSMD1-203ENST00000409643 KRTAP4-12Q9BQ66 201 aa2.34□□□□□ -2.04
PSMD1-203ENST00000409643 LCE1CQ5T751 118 aa2.33□□□□□ -2.04
PSMD1-203ENST00000409643 LCE1BQ5T7P3 118 aa2.33□□□□□ -2.04
PSMD1-203ENST00000409643 KRTAP5-1Q6L8H4 278 aa2.31□□□□□ -2.04
PSMD1-203ENST00000409643 KRTAP4-2Q9BYR5 136 aa2.29□□□□□ -2.04
PSMD1-203ENST00000409643 GPR98Q8WXG9 6306 aa2.24□□□□□ -2.05
PSMD1-203ENST00000409643 KRTAP4-11Q9BYQ6 195 aa2.24□□□□□ -2.05
PSMD1-203ENST00000409643 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.22□□□□□ -2.05
PSMD1-203ENST00000409643 KRTAP5-8O75690 187 aa2.18□□□□□ -2.06
PSMD1-203ENST00000409643 KRTAP5-7Q6L8G8 165 aa2.18□□□□□ -2.06
PSMD1-203ENST00000409643 KRTAP21-2Q3LI59 83 aa2.12□□□□□ -2.07
PSMD1-203ENST00000409643 MUC5BQ9HC84 5762 aaPredicted RBP2.02□□□□□ -2.09
PSMD1-203ENST00000409643 KRTAP5-11Q6L8G4 156 aa2.01□□□□□ -2.09
PSMD1-203ENST00000409643 AHNAK2Q8IVF2 5795 aa2□□□□□ -2.09
PSMD1-203ENST00000409643 AHNAKQ09666 5890 aaKnown RBP1.95□□□□□ -2.1
PSMD1-203ENST00000409643 KRTAP21-1Q3LI58 79 aa1.85□□□□□ -2.11
PSMD1-203ENST00000409643 KRTAP4-4Q9BYR3 166 aa1.84□□□□□ -2.11
PSMD1-203ENST00000409643 LCE1FQ5T754 118 aa1.72□□□□□ -2.13
PSMD1-203ENST00000409643 PHGR1C9JFL3 82 aa1.72□□□□□ -2.13
PSMD1-203ENST00000409643 MUC19Q7Z5P9 8384 aa1.61□□□□□ -2.15
PSMD1-203ENST00000409643 MUC16Q8WXI7 14507 aa1.12□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 135 ms