RNA–Protein interactions for RNA: ENST00000409497.5

SCRN1-202, Transcript of secernin 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SCRN1, Length 1,732 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-202ENST00000409497 KRTAP19-8Q3LI54 63 aa2.88□□□□□ -1.95
SCRN1-202ENST00000409497 MT1BP07438 61 aa2.86□□□□□ -1.95
SCRN1-202ENST00000409497 KRTAP6-3Q3LI67 103 aa2.85□□□□□ -1.95
SCRN1-202ENST00000409497 MACF1Q9UPN3 7388 aaKnown RBP2.84□□□□□ -1.95
SCRN1-202ENST00000409497 SYNE2Q8WXH0 6885 aaKnown RBP2.81□□□□□ -1.96
SCRN1-202ENST00000409497 KRTAP10-5P60370 271 aa2.76□□□□□ -1.97
SCRN1-202ENST00000409497 MT1XP80297 61 aa2.76□□□□□ -1.97
SCRN1-202ENST00000409497 NEBP20929 6669 aa2.75□□□□□ -1.97
SCRN1-202ENST00000409497 TNP1P09430 55 aa2.71□□□□□ -1.98
SCRN1-202ENST00000409497 KMT2DO14686 5537 aa2.7□□□□□ -1.98
SCRN1-202ENST00000409497 KRTAP20-1Q3LI63 56 aa2.69□□□□□ -1.98
SCRN1-202ENST00000409497 KRTAP10-7P60409 375 aaPredicted RBP2.66□□□□□ -1.98
SCRN1-202ENST00000409497 KRTAP5-9P26371 169 aa2.64□□□□□ -1.99
SCRN1-202ENST00000409497 KRTAP10-12P60413 245 aa2.61□□□□□ -1.99
SCRN1-202ENST00000409497 KRTAP2-3P0C7H8 128 aa2.6□□□□□ -1.99
SCRN1-202ENST00000409497 KRTAP2-4Q9BYR9 128 aa2.6□□□□□ -1.99
SCRN1-202ENST00000409497 GPR98Q8WXG9 6306 aa2.6□□□□□ -1.99
SCRN1-202ENST00000409497 LCE3AQ5TA76 89 aa2.59□□□□□ -1.99
SCRN1-202ENST00000409497 MUC12Q9UKN1 5478 aa2.59□□□□□ -1.99
SCRN1-202ENST00000409497 SPRR2FQ96RM1 72 aa2.56□□□□□ -2
SCRN1-202ENST00000409497 SPRR2EP22531 72 aa2.56□□□□□ -2
SCRN1-202ENST00000409497 SPRR2BP35325 72 aa2.56□□□□□ -2
SCRN1-202ENST00000409497 SPRR2AP35326 72 aa2.56□□□□□ -2
SCRN1-202ENST00000409497 KRTAP8-1Q8IUC2 63 aa2.53□□□□□ -2
SCRN1-202ENST00000409497 MDN1Q9NU22 5596 aa2.52□□□□□ -2.01
SCRN1-202ENST00000409497 KRTAP2-2Q9BYT5 123 aa2.51□□□□□ -2.01
SCRN1-202ENST00000409497 KRTAP2-1Q9BYU5 128 aa2.51□□□□□ -2.01
SCRN1-202ENST00000409497 KRTAP19-5Q3LI72 72 aa2.48□□□□□ -2.01
SCRN1-202ENST00000409497 SPRR2DP22532 72 aa2.48□□□□□ -2.01
SCRN1-202ENST00000409497 KRTAP12-3P60328 96 aa2.48□□□□□ -2.01
SCRN1-202ENST00000409497 LCE1AQ5T7P2 110 aa2.48□□□□□ -2.01
SCRN1-202ENST00000409497 KRTAP19-7Q3SYF9 63 aa2.47□□□□□ -2.01
SCRN1-202ENST00000409497 MT1EP04732 61 aa2.42□□□□□ -2.02
SCRN1-202ENST00000409497 MT1LQ93083 61 aa2.37□□□□□ -2.03
SCRN1-202ENST00000409497 KRTAP19-3Q7Z4W3 81 aa2.34□□□□□ -2.04
SCRN1-202ENST00000409497 LCE3CQ5T5A8 94 aa2.31□□□□□ -2.04
SCRN1-202ENST00000409497 MT1GP13640 62 aa2.3□□□□□ -2.04
SCRN1-202ENST00000409497 DSTQ03001 7570 aaKnown RBP2.28□□□□□ -2.04
SCRN1-202ENST00000409497 MT3P25713 68 aa2.28□□□□□ -2.05
SCRN1-202ENST00000409497 MT1MQ8N339 61 aa2.28□□□□□ -2.05
SCRN1-202ENST00000409497 KRTAP4-3Q9BYR4 195 aa2.25□□□□□ -2.05
SCRN1-202ENST00000409497 KRTAP12-4P60329 112 aa2.22□□□□□ -2.05
SCRN1-202ENST00000409497 KRTAP9-6A8MVA2 160 aa2.2□□□□□ -2.06
SCRN1-202ENST00000409497 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.19□□□□□ -2.06
SCRN1-202ENST00000409497 MT4P47944 62 aa2.17□□□□□ -2.06
SCRN1-202ENST00000409497 AHNAK2Q8IVF2 5795 aa2.16□□□□□ -2.06
SCRN1-202ENST00000409497 HMCN1Q96RW7 5635 aa2.1□□□□□ -2.07
SCRN1-202ENST00000409497 KRTAP5-10Q6L8G5 202 aa2.1□□□□□ -2.07
SCRN1-202ENST00000409497 KRTAP5-7Q6L8G8 165 aa2.08□□□□□ -2.08
SCRN1-202ENST00000409497 KRTAP5-4Q6L8H1 288 aa2.08□□□□□ -2.08
SCRN1-202ENST00000409497 SYNE1Q8NF91 8797 aaKnown RBP2.07□□□□□ -2.08
SCRN1-202ENST00000409497 LCE1FQ5T754 118 aa2.06□□□□□ -2.08
SCRN1-202ENST00000409497 KRTAP5-5Q701N2 237 aaPredicted RBP2.06□□□□□ -2.08
SCRN1-202ENST00000409497 LCE1EQ5T753 118 aa2.04□□□□□ -2.08
SCRN1-202ENST00000409497 KRTAP5-11Q6L8G4 156 aa2.02□□□□□ -2.09
SCRN1-202ENST00000409497 MT1AP04731 61 aa2□□□□□ -2.09
SCRN1-202ENST00000409497 KRTAP6-1Q3LI64 71 aa2□□□□□ -2.09
SCRN1-202ENST00000409497 AHNAKQ09666 5890 aaKnown RBP2□□□□□ -2.09
SCRN1-202ENST00000409497 KRTAP20-2Q3LI61 65 aa1.98□□□□□ -2.09
SCRN1-202ENST00000409497 MUC5BQ9HC84 5762 aaPredicted RBP1.91□□□□□ -2.1
SCRN1-202ENST00000409497 PRM1P04553 51 aa1.88□□□□□ -2.11
SCRN1-202ENST00000409497 MUC5ACP98088 5654 aa1.86□□□□□ -2.11
SCRN1-202ENST00000409497 KRTAP5-1Q6L8H4 278 aa1.86□□□□□ -2.11
SCRN1-202ENST00000409497 KRTAP6-2Q3LI66 62 aa1.85□□□□□ -2.11
SCRN1-202ENST00000409497 LCE3EQ5T5B0 92 aa1.82□□□□□ -2.12
SCRN1-202ENST00000409497 OBSCNQ5VST9 7968 aa1.8□□□□□ -2.12
SCRN1-202ENST00000409497 KRTAP5-2Q701N4 177 aa1.8□□□□□ -2.12
SCRN1-202ENST00000409497 KRTAP4-4Q9BYR3 166 aa1.79□□□□□ -2.12
SCRN1-202ENST00000409497 KRTAP5-8O75690 187 aa1.77□□□□□ -2.13
SCRN1-202ENST00000409497 LCE3DQ9BYE3 92 aa1.75□□□□□ -2.13
SCRN1-202ENST00000409497 LCE1BQ5T7P3 118 aa1.5□□□□□ -2.17
SCRN1-202ENST00000409497 LCE1CQ5T751 118 aa1.47□□□□□ -2.17
SCRN1-202ENST00000409497 KRTAP21-1Q3LI58 79 aa1.35□□□□□ -2.19
SCRN1-202ENST00000409497 KRTAP21-2Q3LI59 83 aa1.31□□□□□ -2.2
SCRN1-202ENST00000409497 PHGR1C9JFL3 82 aa1.23□□□□□ -2.21
SCRN1-202ENST00000409497 MUC19Q7Z5P9 8384 aa1.12□□□□□ -2.23
SCRN1-202ENST00000409497 MUC16Q8WXI7 14507 aa0.74□□□□□ -2.29
Retrieved 77 of 20,778 RNA–protein pairs in 84.7 ms