RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 MT1LQ93083 61 aa5.33□□□□□ -1.56
SCAMP4-202ENST00000409472 MUC12Q9UKN1 5478 aa5.3□□□□□ -1.56
SCAMP4-202ENST00000409472 MACF1Q9UPN3 7388 aaKnown RBP5.3□□□□□ -1.56
SCAMP4-202ENST00000409472 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.28□□□□□ -1.56
SCAMP4-202ENST00000409472 SYNE2Q8WXH0 6885 aaKnown RBP5.2□□□□□ -1.58
SCAMP4-202ENST00000409472 KRTAP4-3Q9BYR4 195 aa5.15□□□□□ -1.59
SCAMP4-202ENST00000409472 KRTAP9-7A8MTY7 169 aa5.13□□□□□ -1.59
SCAMP4-202ENST00000409472 KRTAP2-3P0C7H8 128 aa5.11□□□□□ -1.59
SCAMP4-202ENST00000409472 KRTAP2-4Q9BYR9 128 aa5.11□□□□□ -1.59
SCAMP4-202ENST00000409472 KRTAP2-1Q9BYU5 128 aa5.11□□□□□ -1.59
SCAMP4-202ENST00000409472 KRTAP6-3Q3LI67 103 aa5.07□□□□□ -1.6
SCAMP4-202ENST00000409472 LOC100996750A0A140TA64 210 aa5.06□□□□□ -1.6
SCAMP4-202ENST00000409472 KRTAP19-3Q7Z4W3 81 aa5.05□□□□□ -1.6
SCAMP4-202ENST00000409472 KRTAP19-4Q3LI73 84 aa5.04□□□□□ -1.6
SCAMP4-202ENST00000409472 MT1MQ8N339 61 aa5.04□□□□□ -1.6
SCAMP4-202ENST00000409472 SPRR2FQ96RM1 72 aa5.02□□□□□ -1.61
SCAMP4-202ENST00000409472 DSTQ03001 7570 aaKnown RBP5.01□□□□□ -1.61
SCAMP4-202ENST00000409472 MT1GP13640 62 aa4.99□□□□□ -1.61
SCAMP4-202ENST00000409472 KRTAP5-9P26371 169 aa4.94□□□□□ -1.62
SCAMP4-202ENST00000409472 MDN1Q9NU22 5596 aa4.93□□□□□ -1.62
SCAMP4-202ENST00000409472 LCE5AQ5TCM9 118 aa4.92□□□□□ -1.62
SCAMP4-202ENST00000409472 LCE1AQ5T7P2 110 aa4.72□□□□□ -1.65
SCAMP4-202ENST00000409472 NEBP20929 6669 aa4.69□□□□□ -1.66
SCAMP4-202ENST00000409472 KRTAP12-4P60329 112 aa4.65□□□□□ -1.66
SCAMP4-202ENST00000409472 SPRR2EP22531 72 aa4.65□□□□□ -1.67
SCAMP4-202ENST00000409472 SPRR2BP35325 72 aa4.65□□□□□ -1.67
SCAMP4-202ENST00000409472 SPRR2AP35326 72 aa4.65□□□□□ -1.67
SCAMP4-202ENST00000409472 LCE3BQ5TA77 95 aa4.56□□□□□ -1.68
SCAMP4-202ENST00000409472 KRTAP20-1Q3LI63 56 aa4.55□□□□□ -1.68
SCAMP4-202ENST00000409472 KRTAP6-1Q3LI64 71 aa4.55□□□□□ -1.68
SCAMP4-202ENST00000409472 SYNE1Q8NF91 8797 aaKnown RBP4.54□□□□□ -1.68
SCAMP4-202ENST00000409472 SPRR2DP22532 72 aa4.5□□□□□ -1.69
SCAMP4-202ENST00000409472 KRTAP5-5Q701N2 237 aaPredicted RBP4.49□□□□□ -1.69
SCAMP4-202ENST00000409472 KRTAP4-9Q9BYQ8 210 aa4.47□□□□□ -1.69
SCAMP4-202ENST00000409472 MT1AP04731 61 aa4.46□□□□□ -1.7
SCAMP4-202ENST00000409472 KRTAP2-2Q9BYT5 123 aa4.39□□□□□ -1.71
SCAMP4-202ENST00000409472 KRTAP9-4Q9BYQ2 154 aa4.2□□□□□ -1.74
SCAMP4-202ENST00000409472 PRM1P04553 51 aa4.19□□□□□ -1.74
SCAMP4-202ENST00000409472 LCE3DQ9BYE3 92 aa4.14□□□□□ -1.75
SCAMP4-202ENST00000409472 OBSCNQ5VST9 7968 aa4.13□□□□□ -1.75
SCAMP4-202ENST00000409472 LCE3EQ5T5B0 92 aa4.12□□□□□ -1.75
SCAMP4-202ENST00000409472 KRTAP6-2Q3LI66 62 aa4.11□□□□□ -1.75
SCAMP4-202ENST00000409472 LCE4AQ5TA78 99 aa4.08□□□□□ -1.76
SCAMP4-202ENST00000409472 KRTAP5-4Q6L8H1 288 aa4.04□□□□□ -1.76
SCAMP4-202ENST00000409472 MT3P25713 68 aa3.98□□□□□ -1.77
SCAMP4-202ENST00000409472 KRTAP4-6Q9BYQ5 205 aa3.97□□□□□ -1.77
SCAMP4-202ENST00000409472 HMCN1Q96RW7 5635 aa3.94□□□□□ -1.78
SCAMP4-202ENST00000409472 MT4P47944 62 aa3.94□□□□□ -1.78
SCAMP4-202ENST00000409472 LCE1DQ5T752 114 aa3.91□□□□□ -1.78
SCAMP4-202ENST00000409472 KRTAP20-2Q3LI61 65 aa3.82□□□□□ -1.8
SCAMP4-202ENST00000409472 KRTAP5-2Q701N4 177 aa3.74□□□□□ -1.81
SCAMP4-202ENST00000409472 KRTAP5-3Q6L8H2 238 aa3.65□□□□□ -1.83
SCAMP4-202ENST00000409472 LCE1EQ5T753 118 aa3.63□□□□□ -1.83
SCAMP4-202ENST00000409472 AHNAK2Q8IVF2 5795 aa3.56□□□□□ -1.84
SCAMP4-202ENST00000409472 GPR98Q8WXG9 6306 aa3.56□□□□□ -1.84
SCAMP4-202ENST00000409472 KRTAP5-10Q6L8G5 202 aa3.56□□□□□ -1.84
SCAMP4-202ENST00000409472 MUC5ACP98088 5654 aa3.47□□□□□ -1.85
SCAMP4-202ENST00000409472 KRTAP5-7Q6L8G8 165 aa3.43□□□□□ -1.86
SCAMP4-202ENST00000409472 KRTAP4-11Q9BYQ6 195 aa3.36□□□□□ -1.87
SCAMP4-202ENST00000409472 LCE1BQ5T7P3 118 aa3.31□□□□□ -1.88
SCAMP4-202ENST00000409472 KRTAP5-8O75690 187 aa3.25□□□□□ -1.89
SCAMP4-202ENST00000409472 KRTAP5-1Q6L8H4 278 aa3.23□□□□□ -1.89
SCAMP4-202ENST00000409472 KRTAP4-2Q9BYR5 136 aa3.22□□□□□ -1.89
SCAMP4-202ENST00000409472 LCE1CQ5T751 118 aa3.13□□□□□ -1.91
SCAMP4-202ENST00000409472 KRTAP9-9Q9BYP9 154 aa3.04□□□□□ -1.92
SCAMP4-202ENST00000409472 LCE1FQ5T754 118 aa3.01□□□□□ -1.93
SCAMP4-202ENST00000409472 KRTAP21-2Q3LI59 83 aa2.94□□□□□ -1.94
SCAMP4-202ENST00000409472 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.94□□□□□ -1.94
SCAMP4-202ENST00000409472 MUC5BQ9HC84 5762 aaPredicted RBP2.93□□□□□ -1.94
SCAMP4-202ENST00000409472 AHNAKQ09666 5890 aaKnown RBP2.87□□□□□ -1.95
SCAMP4-202ENST00000409472 KRTAP4-4Q9BYR3 166 aa2.73□□□□□ -1.97
SCAMP4-202ENST00000409472 KRTAP5-11Q6L8G4 156 aa2.73□□□□□ -1.97
SCAMP4-202ENST00000409472 KRTAP21-1Q3LI58 79 aa2.72□□□□□ -1.97
SCAMP4-202ENST00000409472 KRTAP4-12Q9BQ66 201 aa2.68□□□□□ -1.98
SCAMP4-202ENST00000409472 MUC19Q7Z5P9 8384 aa2.52□□□□□ -2.01
SCAMP4-202ENST00000409472 PHGR1C9JFL3 82 aa2.37□□□□□ -2.03
SCAMP4-202ENST00000409472 MUC16Q8WXI7 14507 aa1.5□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 119.6 ms