RNA–Protein interactions for RNA: ENST00000409386.3

CAMSAP1-203, Transcript of calmodulin regulated spectrin associated protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAMSAP1, Length 5,730 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAMSAP1-203ENST00000409386 MT1EP04732 61 aa4.92□□□□□ -1.62
CAMSAP1-203ENST00000409386 LCE2AQ5TA79 106 aaPredicted RBP4.9□□□□□ -1.62
CAMSAP1-203ENST00000409386 KRTAP4-3Q9BYR4 195 aa4.89□□□□□ -1.63
CAMSAP1-203ENST00000409386 LOC100996750A0A140TA64 210 aa4.86□□□□□ -1.63
CAMSAP1-203ENST00000409386 KRTAP19-6Q3LI70 58 aa4.85□□□□□ -1.63
CAMSAP1-203ENST00000409386 SYNE1Q8NF91 8797 aaKnown RBP4.84□□□□□ -1.63
CAMSAP1-203ENST00000409386 MT4P47944 62 aa4.8□□□□□ -1.64
CAMSAP1-203ENST00000409386 LCE2DQ5TA82 110 aaPredicted RBP4.78□□□□□ -1.64
CAMSAP1-203ENST00000409386 SYNE2Q8WXH0 6885 aaKnown RBP4.77□□□□□ -1.65
CAMSAP1-203ENST00000409386 MT1MQ8N339 61 aa4.76□□□□□ -1.65
CAMSAP1-203ENST00000409386 LCE3DQ9BYE3 92 aa4.73□□□□□ -1.65
CAMSAP1-203ENST00000409386 KRTAP9-6A0A140TA67 174 aa4.71□□□□□ -1.66
CAMSAP1-203ENST00000409386 KRTAP19-7Q3SYF9 63 aa4.63□□□□□ -1.67
CAMSAP1-203ENST00000409386 LCE3EQ5T5B0 92 aa4.6□□□□□ -1.67
CAMSAP1-203ENST00000409386 KRTAP4-9Q9BYQ8 210 aa4.47□□□□□ -1.69
CAMSAP1-203ENST00000409386 USH2AO75445 5202 aa4.46□□□□□ -1.69
CAMSAP1-203ENST00000409386 KRTAP9-7A8MTY7 169 aa4.46□□□□□ -1.69
CAMSAP1-203ENST00000409386 MT3P25713 68 aa4.45□□□□□ -1.7
CAMSAP1-203ENST00000409386 OBSCNQ5VST9 7968 aa4.44□□□□□ -1.7
CAMSAP1-203ENST00000409386 LCE1BQ5T7P3 118 aa4.43□□□□□ -1.7
CAMSAP1-203ENST00000409386 LCE1DQ5T752 114 aa4.43□□□□□ -1.7
CAMSAP1-203ENST00000409386 KMT2DO14686 5537 aa4.41□□□□□ -1.7
CAMSAP1-203ENST00000409386 FCGBPQ9Y6R7 5405 aaPredicted RBP4.41□□□□□ -1.7
CAMSAP1-203ENST00000409386 DSTQ03001 7570 aaKnown RBP4.37□□□□□ -1.71
CAMSAP1-203ENST00000409386 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.36□□□□□ -1.71
CAMSAP1-203ENST00000409386 KRTAP20-1Q3LI63 56 aa4.32□□□□□ -1.72
CAMSAP1-203ENST00000409386 PRM1P04553 51 aa4.3□□□□□ -1.72
CAMSAP1-203ENST00000409386 MT1AP04731 61 aa4.29□□□□□ -1.72
CAMSAP1-203ENST00000409386 KRTAP9-6A8MVA2 160 aa4.27□□□□□ -1.73
CAMSAP1-203ENST00000409386 KRTAP2-3P0C7H8 128 aa4.26□□□□□ -1.73
CAMSAP1-203ENST00000409386 KRTAP2-4Q9BYR9 128 aa4.26□□□□□ -1.73
CAMSAP1-203ENST00000409386 KRTAP2-1Q9BYU5 128 aa4.26□□□□□ -1.73
CAMSAP1-203ENST00000409386 KRTAP6-3Q3LI67 103 aa4.26□□□□□ -1.73
CAMSAP1-203ENST00000409386 LCE1AQ5T7P2 110 aa4.24□□□□□ -1.73
CAMSAP1-203ENST00000409386 KRTAP6-1Q3LI64 71 aa4.23□□□□□ -1.73
CAMSAP1-203ENST00000409386 MACF1Q9UPN3 7388 aaKnown RBP4.21□□□□□ -1.74
CAMSAP1-203ENST00000409386 LCE5AQ5TCM9 118 aa4.2□□□□□ -1.74
CAMSAP1-203ENST00000409386 KRTAP6-2Q3LI66 62 aa4.16□□□□□ -1.74
CAMSAP1-203ENST00000409386 MUC12Q9UKN1 5478 aa4.06□□□□□ -1.76
CAMSAP1-203ENST00000409386 KRTAP2-2Q9BYT5 123 aa4.01□□□□□ -1.77
CAMSAP1-203ENST00000409386 KRTAP9-4Q9BYQ2 154 aa4□□□□□ -1.77
CAMSAP1-203ENST00000409386 SSPOA2VEC9 5147 aa3.99□□□□□ -1.77
CAMSAP1-203ENST00000409386 LCE4AQ5TA78 99 aa3.91□□□□□ -1.78
CAMSAP1-203ENST00000409386 NEBP20929 6669 aa3.82□□□□□ -1.8
CAMSAP1-203ENST00000409386 MDN1Q9NU22 5596 aa3.77□□□□□ -1.81
CAMSAP1-203ENST00000409386 KRTAP4-6Q9BYQ5 205 aa3.72□□□□□ -1.81
CAMSAP1-203ENST00000409386 KRTAP5-9P26371 169 aa3.71□□□□□ -1.82
CAMSAP1-203ENST00000409386 LCE1CQ5T751 118 aa3.7□□□□□ -1.82
CAMSAP1-203ENST00000409386 LCE1EQ5T753 118 aa3.7□□□□□ -1.82
CAMSAP1-203ENST00000409386 LCE1FQ5T754 118 aa3.7□□□□□ -1.82
CAMSAP1-203ENST00000409386 KRTAP20-2Q3LI61 65 aa3.49□□□□□ -1.85
CAMSAP1-203ENST00000409386 KRTAP9-9Q9BYP9 154 aa3.45□□□□□ -1.86
CAMSAP1-203ENST00000409386 MUC19Q7Z5P9 8384 aa3.43□□□□□ -1.86
CAMSAP1-203ENST00000409386 KRTAP4-11Q9BYQ6 195 aa3.28□□□□□ -1.88
CAMSAP1-203ENST00000409386 KRTAP4-12Q9BQ66 201 aa3.27□□□□□ -1.89
CAMSAP1-203ENST00000409386 KRTAP4-2Q9BYR5 136 aa3.27□□□□□ -1.89
CAMSAP1-203ENST00000409386 KRTAP4-4Q9BYR3 166 aa3.26□□□□□ -1.89
CAMSAP1-203ENST00000409386 GPR98Q8WXG9 6306 aa3.26□□□□□ -1.89
CAMSAP1-203ENST00000409386 KRTAP5-4Q6L8H1 288 aa3.16□□□□□ -1.9
CAMSAP1-203ENST00000409386 MUC5ACP98088 5654 aa3.13□□□□□ -1.91
CAMSAP1-203ENST00000409386 KRTAP5-5Q701N2 237 aaPredicted RBP3.11□□□□□ -1.91
CAMSAP1-203ENST00000409386 HMCN1Q96RW7 5635 aa2.93□□□□□ -1.94
CAMSAP1-203ENST00000409386 KRTAP5-3Q6L8H2 238 aa2.92□□□□□ -1.94
CAMSAP1-203ENST00000409386 KRTAP5-8O75690 187 aa2.74□□□□□ -1.97
CAMSAP1-203ENST00000409386 AHNAK2Q8IVF2 5795 aa2.69□□□□□ -1.98
CAMSAP1-203ENST00000409386 KRTAP5-2Q701N4 177 aa2.53□□□□□ -2
CAMSAP1-203ENST00000409386 KRTAP5-10Q6L8G5 202 aa2.45□□□□□ -2.02
CAMSAP1-203ENST00000409386 AHNAKQ09666 5890 aaKnown RBP2.38□□□□□ -2.03
CAMSAP1-203ENST00000409386 PHGR1C9JFL3 82 aa2.34□□□□□ -2.03
CAMSAP1-203ENST00000409386 MUC5BQ9HC84 5762 aaPredicted RBP2.34□□□□□ -2.03
CAMSAP1-203ENST00000409386 KRTAP5-1Q6L8H4 278 aa2.32□□□□□ -2.04
CAMSAP1-203ENST00000409386 KRTAP5-11Q6L8G4 156 aa2.18□□□□□ -2.06
CAMSAP1-203ENST00000409386 KRTAP21-2Q3LI59 83 aa2.18□□□□□ -2.06
CAMSAP1-203ENST00000409386 KRTAP5-7Q6L8G8 165 aa1.96□□□□□ -2.09
CAMSAP1-203ENST00000409386 KRTAP21-1Q3LI58 79 aa1.9□□□□□ -2.11
CAMSAP1-203ENST00000409386 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.88□□□□□ -2.11
CAMSAP1-203ENST00000409386 MUC16Q8WXI7 14507 aa1.4□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 71.4 ms