RNA–Protein interactions for RNA: ENST00000409148.1

LRRTM1-202, Transcript of leucine rich repeat transmembrane neuronal 1, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LRRTM1, Length 2,126 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1-202ENST00000409148 MT1EP04732 61 aa6.11□□□□□ -1.43
LRRTM1-202ENST00000409148 MT1LQ93083 61 aa6.06□□□□□ -1.44
LRRTM1-202ENST00000409148 KRTAP4-7Q9BYR0 210 aa5.94□□□□□ -1.46
LRRTM1-202ENST00000409148 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.93□□□□□ -1.46
LRRTM1-202ENST00000409148 KRTAP9-6A8MVA2 160 aa5.89□□□□□ -1.47
LRRTM1-202ENST00000409148 MACF1Q9UPN3 7388 aaKnown RBP5.87□□□□□ -1.47
LRRTM1-202ENST00000409148 KRTAP9-7A8MTY7 169 aa5.81□□□□□ -1.48
LRRTM1-202ENST00000409148 KRTAP19-3Q7Z4W3 81 aa5.81□□□□□ -1.48
LRRTM1-202ENST00000409148 MT1GP13640 62 aa5.78□□□□□ -1.48
LRRTM1-202ENST00000409148 MT1MQ8N339 61 aa5.74□□□□□ -1.49
LRRTM1-202ENST00000409148 SPRR2FQ96RM1 72 aa5.74□□□□□ -1.49
LRRTM1-202ENST00000409148 SYNE2Q8WXH0 6885 aaKnown RBP5.72□□□□□ -1.49
LRRTM1-202ENST00000409148 KRTAP2-3P0C7H8 128 aa5.71□□□□□ -1.5
LRRTM1-202ENST00000409148 KRTAP2-4Q9BYR9 128 aa5.71□□□□□ -1.5
LRRTM1-202ENST00000409148 KRTAP2-1Q9BYU5 128 aa5.71□□□□□ -1.5
LRRTM1-202ENST00000409148 KRTAP5-9P26371 169 aa5.69□□□□□ -1.5
LRRTM1-202ENST00000409148 MUC12Q9UKN1 5478 aa5.67□□□□□ -1.5
LRRTM1-202ENST00000409148 KRTAP4-3Q9BYR4 195 aa5.66□□□□□ -1.5
LRRTM1-202ENST00000409148 KRTAP6-3Q3LI67 103 aa5.65□□□□□ -1.5
LRRTM1-202ENST00000409148 LCE5AQ5TCM9 118 aa5.64□□□□□ -1.51
LRRTM1-202ENST00000409148 LCE1AQ5T7P2 110 aa5.47□□□□□ -1.53
LRRTM1-202ENST00000409148 SPRR2EP22531 72 aa5.45□□□□□ -1.54
LRRTM1-202ENST00000409148 SPRR2BP35325 72 aa5.45□□□□□ -1.54
LRRTM1-202ENST00000409148 SPRR2AP35326 72 aa5.45□□□□□ -1.54
LRRTM1-202ENST00000409148 MDN1Q9NU22 5596 aa5.4□□□□□ -1.55
LRRTM1-202ENST00000409148 NEBP20929 6669 aa5.29□□□□□ -1.56
LRRTM1-202ENST00000409148 DSTQ03001 7570 aaKnown RBP5.27□□□□□ -1.57
LRRTM1-202ENST00000409148 SPRR2DP22532 72 aa5.25□□□□□ -1.57
LRRTM1-202ENST00000409148 LCE3BQ5TA77 95 aa5.25□□□□□ -1.57
LRRTM1-202ENST00000409148 KRTAP4-12Q9BQ66 201 aa5.18□□□□□ -1.58
LRRTM1-202ENST00000409148 KRTAP9-9Q9BYP9 154 aa5.16□□□□□ -1.58
LRRTM1-202ENST00000409148 KRTAP9-4Q9BYQ2 154 aa5.16□□□□□ -1.58
LRRTM1-202ENST00000409148 MT1AP04731 61 aa5.14□□□□□ -1.59
LRRTM1-202ENST00000409148 KRTAP5-5Q701N2 237 aaPredicted RBP5.11□□□□□ -1.59
LRRTM1-202ENST00000409148 KRTAP12-4P60329 112 aa5.11□□□□□ -1.59
LRRTM1-202ENST00000409148 KRTAP20-1Q3LI63 56 aa5.11□□□□□ -1.59
LRRTM1-202ENST00000409148 KRTAP6-1Q3LI64 71 aa5.1□□□□□ -1.59
LRRTM1-202ENST00000409148 LCE1DQ5T752 114 aa4.92□□□□□ -1.62
LRRTM1-202ENST00000409148 KRTAP2-2Q9BYT5 123 aa4.89□□□□□ -1.63
LRRTM1-202ENST00000409148 KRTAP4-9Q9BYQ8 210 aa4.85□□□□□ -1.63
LRRTM1-202ENST00000409148 SYNE1Q8NF91 8797 aaKnown RBP4.82□□□□□ -1.64
LRRTM1-202ENST00000409148 KRTAP4-2Q9BYR5 136 aa4.79□□□□□ -1.64
LRRTM1-202ENST00000409148 LCE3DQ9BYE3 92 aa4.75□□□□□ -1.65
LRRTM1-202ENST00000409148 KRTAP5-4Q6L8H1 288 aa4.73□□□□□ -1.65
LRRTM1-202ENST00000409148 LCE4AQ5TA78 99 aa4.67□□□□□ -1.66
LRRTM1-202ENST00000409148 LCE3EQ5T5B0 92 aa4.66□□□□□ -1.66
LRRTM1-202ENST00000409148 MT3P25713 68 aa4.64□□□□□ -1.67
LRRTM1-202ENST00000409148 KRTAP6-2Q3LI66 62 aa4.63□□□□□ -1.67
LRRTM1-202ENST00000409148 KRTAP4-11Q9BYQ6 195 aa4.6□□□□□ -1.67
LRRTM1-202ENST00000409148 PRM1P04553 51 aa4.57□□□□□ -1.68
LRRTM1-202ENST00000409148 MT4P47944 62 aa4.55□□□□□ -1.68
LRRTM1-202ENST00000409148 KRTAP5-3Q6L8H2 238 aa4.52□□□□□ -1.69
LRRTM1-202ENST00000409148 KRTAP20-2Q3LI61 65 aa4.42□□□□□ -1.7
LRRTM1-202ENST00000409148 HMCN1Q96RW7 5635 aa4.39□□□□□ -1.71
LRRTM1-202ENST00000409148 KRTAP5-2Q701N4 177 aa4.32□□□□□ -1.72
LRRTM1-202ENST00000409148 OBSCNQ5VST9 7968 aa4.2□□□□□ -1.74
LRRTM1-202ENST00000409148 GPR98Q8WXG9 6306 aa4.1□□□□□ -1.75
LRRTM1-202ENST00000409148 AHNAK2Q8IVF2 5795 aa4.02□□□□□ -1.77
LRRTM1-202ENST00000409148 KRTAP5-10Q6L8G5 202 aa3.98□□□□□ -1.77
LRRTM1-202ENST00000409148 LCE1EQ5T753 118 aa3.92□□□□□ -1.78
LRRTM1-202ENST00000409148 KRTAP5-7Q6L8G8 165 aa3.79□□□□□ -1.8
LRRTM1-202ENST00000409148 MUC5ACP98088 5654 aa3.76□□□□□ -1.81
LRRTM1-202ENST00000409148 KRTAP5-8O75690 187 aa3.73□□□□□ -1.81
LRRTM1-202ENST00000409148 LCE1BQ5T7P3 118 aa3.73□□□□□ -1.81
LRRTM1-202ENST00000409148 KRTAP5-1Q6L8H4 278 aa3.71□□□□□ -1.82
LRRTM1-202ENST00000409148 LCE1CQ5T751 118 aa3.66□□□□□ -1.82
LRRTM1-202ENST00000409148 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.45□□□□□ -1.86
LRRTM1-202ENST00000409148 KRTAP21-2Q3LI59 83 aa3.32□□□□□ -1.88
LRRTM1-202ENST00000409148 MUC5BQ9HC84 5762 aaPredicted RBP3.31□□□□□ -1.88
LRRTM1-202ENST00000409148 AHNAKQ09666 5890 aaKnown RBP3.22□□□□□ -1.89
LRRTM1-202ENST00000409148 KRTAP5-11Q6L8G4 156 aa3.19□□□□□ -1.9
LRRTM1-202ENST00000409148 KRTAP21-1Q3LI58 79 aa2.97□□□□□ -1.93
LRRTM1-202ENST00000409148 LCE1FQ5T754 118 aa2.96□□□□□ -1.94
LRRTM1-202ENST00000409148 KRTAP4-4Q9BYR3 166 aa2.95□□□□□ -1.94
LRRTM1-202ENST00000409148 PHGR1C9JFL3 82 aa2.74□□□□□ -1.97
LRRTM1-202ENST00000409148 MUC19Q7Z5P9 8384 aa2.63□□□□□ -1.99
LRRTM1-202ENST00000409148 MUC16Q8WXI7 14507 aa1.81□□□□□ -2.12
Retrieved 77 of 20,778 RNA–protein pairs in 437 ms