RNA–Protein interactions for RNA: ENST00000409141.5

PDLIM2-206, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-206ENST00000409141 LCE3AQ5TA76 89 aa6.53□□□□□ -1.36
PDLIM2-206ENST00000409141 CDC42SE1Q9NRR8 79 aa6.53□□□□□ -1.36
PDLIM2-206ENST00000409141 K7ERS5 55 aa6.47□□□□□ -1.37
PDLIM2-206ENST00000409141 MT1GP13640 62 aa6.45□□□□□ -1.38
PDLIM2-206ENST00000409141 DSTQ03001 7570 aaKnown RBP6.44□□□□□ -1.38
PDLIM2-206ENST00000409141 PP632Q6XCG6 107 aa6.41□□□□□ -1.38
PDLIM2-206ENST00000409141 MT1LQ93083 61 aa6.4□□□□□ -1.39
PDLIM2-206ENST00000409141 BRK1Q8WUW1 75 aa6.35□□□□□ -1.39
PDLIM2-206ENST00000409141 KRTAP25-1Q3LHN0 102 aa6.34□□□□□ -1.4
PDLIM2-206ENST00000409141 MT1MQ8N339 61 aa6.34□□□□□ -1.4
PDLIM2-206ENST00000409141 KRTAP12-3P60328 96 aa6.29□□□□□ -1.4
PDLIM2-206ENST00000409141 KRTAP4-3Q9BYR4 195 aa6.19□□□□□ -1.42
PDLIM2-206ENST00000409141 ROMO1P60602 79 aa6.14□□□□□ -1.43
PDLIM2-206ENST00000409141 KRTAP4-9Q9BYQ8 210 aa6.13□□□□□ -1.43
PDLIM2-206ENST00000409141 KRTAP4-7Q9BYR0 210 aa6.1□□□□□ -1.43
PDLIM2-206ENST00000409141 KRTAP23-1A1A580 65 aa6.09□□□□□ -1.43
PDLIM2-206ENST00000409141 PRO0628Q9UI54 55 aa6.06□□□□□ -1.44
PDLIM2-206ENST00000409141 LCE4AQ5TA78 99 aa6.02□□□□□ -1.44
PDLIM2-206ENST00000409141 PMAIP1Q13794 54 aa5.99□□□□□ -1.45
PDLIM2-206ENST00000409141 LCE1DQ5T752 114 aa5.99□□□□□ -1.45
PDLIM2-206ENST00000409141 MT4P47944 62 aa5.96□□□□□ -1.45
PDLIM2-206ENST00000409141 KRTAP19-4Q3LI73 84 aa5.94□□□□□ -1.46
PDLIM2-206ENST00000409141 KRTAP15-1Q3LI76 137 aa5.94□□□□□ -1.46
PDLIM2-206ENST00000409141 KRTAP5-4Q6L8H1 288 aa5.93□□□□□ -1.46
PDLIM2-206ENST00000409141 HMCN1Q96RW7 5635 aa5.89□□□□□ -1.47
PDLIM2-206ENST00000409141 GPR98Q8WXG9 6306 aa5.82□□□□□ -1.48
PDLIM2-206ENST00000409141 LCE3CQ5T5A8 94 aa5.82□□□□□ -1.48
PDLIM2-206ENST00000409141 KRTAP4-6Q9BYQ5 205 aa5.8□□□□□ -1.48
PDLIM2-206ENST00000409141 LOC100996750A0A140TA64 210 aa5.77□□□□□ -1.49
PDLIM2-206ENST00000409141 KRTAP5-5Q701N2 237 aaPredicted RBP5.77□□□□□ -1.49
PDLIM2-206ENST00000409141 KTN1-AS1Q86SY8 53 aa5.67□□□□□ -1.5
PDLIM2-206ENST00000409141 PRAC1Q96KF2 57 aa5.64□□□□□ -1.51
PDLIM2-206ENST00000409141 KRTAP12-4P60329 112 aa5.63□□□□□ -1.51
PDLIM2-206ENST00000409141 AHNAK2Q8IVF2 5795 aa5.61□□□□□ -1.51
PDLIM2-206ENST00000409141 KRTAP20-2Q3LI61 65 aa5.6□□□□□ -1.51
PDLIM2-206ENST00000409141 SPRR5A0A1B0GTR4 108 aa5.59□□□□□ -1.51
PDLIM2-206ENST00000409141 SYNE1Q8NF91 8797 aaKnown RBP5.53□□□□□ -1.52
PDLIM2-206ENST00000409141 KRTAP9-6A8MVA2 160 aa5.46□□□□□ -1.53
PDLIM2-206ENST00000409141 KRTAP5-10Q6L8G5 202 aa5.46□□□□□ -1.53
PDLIM2-206ENST00000409141 MT1AP04731 61 aa5.45□□□□□ -1.54
PDLIM2-206ENST00000409141 KRTAP5-3Q6L8H2 238 aa5.42□□□□□ -1.54
PDLIM2-206ENST00000409141 KRTAP6-1Q3LI64 71 aa5.4□□□□□ -1.54
PDLIM2-206ENST00000409141 KRTAP9-4Q9BYQ2 154 aa5.26□□□□□ -1.57
PDLIM2-206ENST00000409141 KRTAP5-7Q6L8G8 165 aa5.23□□□□□ -1.57
PDLIM2-206ENST00000409141 KRTAP5-2Q701N4 177 aa5.21□□□□□ -1.58
PDLIM2-206ENST00000409141 KRTAP6-2Q3LI66 62 aa5.14□□□□□ -1.59
PDLIM2-206ENST00000409141 KRTAP4-11Q9BYQ6 195 aa5.08□□□□□ -1.6
PDLIM2-206ENST00000409141 MT3P25713 68 aa4.99□□□□□ -1.61
PDLIM2-206ENST00000409141 A0A0A0MQY5 61 aa4.95□□□□□ -1.62
PDLIM2-206ENST00000409141 H3BS24 57 aa4.94□□□□□ -1.62
PDLIM2-206ENST00000409141 OBSCNQ5VST9 7968 aa4.93□□□□□ -1.62
PDLIM2-206ENST00000409141 KRTAP5-8O75690 187 aa4.89□□□□□ -1.63
PDLIM2-206ENST00000409141 LUZP6Q538Z0 58 aa4.68□□□□□ -1.66
PDLIM2-206ENST00000409141 KRTAP5-1Q6L8H4 278 aa4.65□□□□□ -1.66
PDLIM2-206ENST00000409141 KRTAP9-9Q9BYP9 154 aa4.63□□□□□ -1.67
PDLIM2-206ENST00000409141 MUC5BQ9HC84 5762 aaPredicted RBP4.62□□□□□ -1.67
PDLIM2-206ENST00000409141 AHNAKQ09666 5890 aaKnown RBP4.61□□□□□ -1.67
PDLIM2-206ENST00000409141 MUC5ACP98088 5654 aa4.6□□□□□ -1.67
PDLIM2-206ENST00000409141 LCE1EQ5T753 118 aa4.52□□□□□ -1.69
PDLIM2-206ENST00000409141 NDUFAF8A1L188 74 aa4.3□□□□□ -1.72
PDLIM2-206ENST00000409141 LCE1BQ5T7P3 118 aa4.28□□□□□ -1.72
PDLIM2-206ENST00000409141 KRTAP4-2Q9BYR5 136 aa4.25□□□□□ -1.73
PDLIM2-206ENST00000409141 LCE3DQ9BYE3 92 aa4.23□□□□□ -1.73
PDLIM2-206ENST00000409141 LCE1CQ5T751 118 aa4.2□□□□□ -1.74
PDLIM2-206ENST00000409141 LCE3EQ5T5B0 92 aa4□□□□□ -1.77
PDLIM2-206ENST00000409141 KRTAP4-12Q9BQ66 201 aa3.83□□□□□ -1.8
PDLIM2-206ENST00000409141 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.82□□□□□ -1.8
PDLIM2-206ENST00000409141 KRTAP5-11Q6L8G4 156 aa3.78□□□□□ -1.8
PDLIM2-206ENST00000409141 LCE1FQ5T754 118 aa3.65□□□□□ -1.83
PDLIM2-206ENST00000409141 INE1O15225 51 aa3.58□□□□□ -1.84
PDLIM2-206ENST00000409141 KRTAP21-2Q3LI59 83 aa3.55□□□□□ -1.84
PDLIM2-206ENST00000409141 PHGR1C9JFL3 82 aa3.27□□□□□ -1.89
PDLIM2-206ENST00000409141 KRTAP4-4Q9BYR3 166 aa3.26□□□□□ -1.89
PDLIM2-206ENST00000409141 PRM1P04553 51 aa3.16□□□□□ -1.9
PDLIM2-206ENST00000409141 MUC19Q7Z5P9 8384 aa3.02□□□□□ -1.93
PDLIM2-206ENST00000409141 KRTAP21-1Q3LI58 79 aa2.42□□□□□ -2.02
PDLIM2-206ENST00000409141 MUC16Q8WXI7 14507 aa2.13□□□□□ -2.07
Retrieved 77 of 20,778 RNA–protein pairs in 154.1 ms