RNA–Protein interactions for RNA: ENST00000409115.7

PTMA-202, Transcript of prothymosin alpha, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PTMA, Length 1,221 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTMA-202ENST00000409115 NEBP20929 6669 aa4.37□□□□□ -1.71
PTMA-202ENST00000409115 LCE3EQ5T5B0 92 aa4.36□□□□□ -1.71
PTMA-202ENST00000409115 MT1BP07438 61 aa4.35□□□□□ -1.71
PTMA-202ENST00000409115 ROMO1P60602 79 aa4.35□□□□□ -1.71
PTMA-202ENST00000409115 MUC12Q9UKN1 5478 aa4.32□□□□□ -1.72
PTMA-202ENST00000409115 KRTAP12-2P59991 146 aa4.3□□□□□ -1.72
PTMA-202ENST00000409115 KRTAP19-8Q3LI54 63 aa4.24□□□□□ -1.73
PTMA-202ENST00000409115 S4R3F8 94 aa4.24□□□□□ -1.73
PTMA-202ENST00000409115 SPINT4Q6UDR6 99 aa4.22□□□□□ -1.73
PTMA-202ENST00000409115 CRIPTQ9P021 101 aa4.21□□□□□ -1.74
PTMA-202ENST00000409115 SPRR2GQ9BYE4 73 aa4.2□□□□□ -1.74
PTMA-202ENST00000409115 KRTAP2-3P0C7H8 128 aa4.18□□□□□ -1.74
PTMA-202ENST00000409115 KRTAP2-4Q9BYR9 128 aa4.18□□□□□ -1.74
PTMA-202ENST00000409115 KMT2DO14686 5537 aa4.18□□□□□ -1.74
PTMA-202ENST00000409115 A0A0D9SG42 100 aa4.15□□□□□ -1.75
PTMA-202ENST00000409115 SPRR2EP22531 72 aa4.15□□□□□ -1.75
PTMA-202ENST00000409115 SPRR2BP35325 72 aa4.15□□□□□ -1.75
PTMA-202ENST00000409115 SPRR2AP35326 72 aa4.15□□□□□ -1.75
PTMA-202ENST00000409115 MDN1Q9NU22 5596 aa4.14□□□□□ -1.75
PTMA-202ENST00000409115 SPRR2FQ96RM1 72 aa4.14□□□□□ -1.75
PTMA-202ENST00000409115 M0QZ58 72 aa4.13□□□□□ -1.75
PTMA-202ENST00000409115 P0C880 135 aa4.1□□□□□ -1.75
PTMA-202ENST00000409115 KRTAP13-4Q3LI77 160 aa4.09□□□□□ -1.75
PTMA-202ENST00000409115 CAMK2N1Q7Z7J9 78 aa4.09□□□□□ -1.75
PTMA-202ENST00000409115 KRTAP12-1P59990 96 aa4.03□□□□□ -1.76
PTMA-202ENST00000409115 KRTAP2-1Q9BYU5 128 aa4.03□□□□□ -1.76
PTMA-202ENST00000409115 SPRR2DP22532 72 aa4.01□□□□□ -1.77
PTMA-202ENST00000409115 KRTAP8-1Q8IUC2 63 aa4.01□□□□□ -1.77
PTMA-202ENST00000409115 MT1XP80297 61 aa4□□□□□ -1.77
PTMA-202ENST00000409115 C10orf95Q9H7T3 257 aa4□□□□□ -1.77
PTMA-202ENST00000409115 KRTAP4-3Q9BYR4 195 aa3.94□□□□□ -1.78
PTMA-202ENST00000409115 PRO2289Q9P1D8 64 aa3.93□□□□□ -1.78
PTMA-202ENST00000409115 R4GN34 69 aa3.93□□□□□ -1.78
PTMA-202ENST00000409115 PP632Q6XCG6 107 aa3.92□□□□□ -1.78
PTMA-202ENST00000409115 OBSCNQ5VST9 7968 aa3.92□□□□□ -1.78
PTMA-202ENST00000409115 LUZP6Q538Z0 58 aa3.86□□□□□ -1.79
PTMA-202ENST00000409115 PLAC4Q8WY50 150 aa3.85□□□□□ -1.79
PTMA-202ENST00000409115 KRTAP5-2Q701N4 177 aa3.83□□□□□ -1.8
PTMA-202ENST00000409115 LCE3AQ5TA76 89 aa3.79□□□□□ -1.8
PTMA-202ENST00000409115 TNP1P09430 55 aa3.69□□□□□ -1.82
PTMA-202ENST00000409115 GPR98Q8WXG9 6306 aa3.67□□□□□ -1.82
PTMA-202ENST00000409115 LCE3DQ9BYE3 92 aa3.67□□□□□ -1.82
PTMA-202ENST00000409115 DSTQ03001 7570 aaKnown RBP3.61□□□□□ -1.83
PTMA-202ENST00000409115 SPRR5A0A1B0GTR4 108 aa3.59□□□□□ -1.83
PTMA-202ENST00000409115 KRTAP19-7Q3SYF9 63 aa3.58□□□□□ -1.84
PTMA-202ENST00000409115 MT1EP04732 61 aa3.56□□□□□ -1.84
PTMA-202ENST00000409115 MT4P47944 62 aa3.56□□□□□ -1.84
PTMA-202ENST00000409115 KRTAP19-3Q7Z4W3 81 aa3.56□□□□□ -1.84
PTMA-202ENST00000409115 KRTAP5-10Q6L8G5 202 aa3.47□□□□□ -1.85
PTMA-202ENST00000409115 KRTAP5-5Q701N2 237 aaPredicted RBP3.46□□□□□ -1.86
PTMA-202ENST00000409115 HMCN1Q96RW7 5635 aa3.44□□□□□ -1.86
PTMA-202ENST00000409115 AHNAK2Q8IVF2 5795 aa3.44□□□□□ -1.86
PTMA-202ENST00000409115 KRTAP19-5Q3LI72 72 aa3.43□□□□□ -1.86
PTMA-202ENST00000409115 INE1O15225 51 aa3.42□□□□□ -1.86
PTMA-202ENST00000409115 MT1MQ8N339 61 aa3.42□□□□□ -1.86
PTMA-202ENST00000409115 MT1GP13640 62 aa3.4□□□□□ -1.87
PTMA-202ENST00000409115 MT1LQ93083 61 aa3.36□□□□□ -1.87
PTMA-202ENST00000409115 KRTAP5-7Q6L8G8 165 aa3.35□□□□□ -1.87
PTMA-202ENST00000409115 KRTAP5-8O75690 187 aa3.25□□□□□ -1.89
PTMA-202ENST00000409115 KRTAP20-2Q3LI61 65 aa3.24□□□□□ -1.89
PTMA-202ENST00000409115 LCE1CQ5T751 118 aa3.24□□□□□ -1.89
PTMA-202ENST00000409115 LCE1BQ5T7P3 118 aa3.24□□□□□ -1.89
PTMA-202ENST00000409115 KRTAP12-3P60328 96 aa3.22□□□□□ -1.89
PTMA-202ENST00000409115 KRTAP12-4P60329 112 aa3.06□□□□□ -1.92
PTMA-202ENST00000409115 SYNE1Q8NF91 8797 aaKnown RBP3.02□□□□□ -1.93
PTMA-202ENST00000409115 KRTAP6-1Q3LI64 71 aa2.88□□□□□ -1.95
PTMA-202ENST00000409115 MUC5ACP98088 5654 aa2.87□□□□□ -1.95
PTMA-202ENST00000409115 MT1AP04731 61 aa2.84□□□□□ -1.95
PTMA-202ENST00000409115 AHNAKQ09666 5890 aaKnown RBP2.82□□□□□ -1.96
PTMA-202ENST00000409115 MUC5BQ9HC84 5762 aaPredicted RBP2.81□□□□□ -1.96
PTMA-202ENST00000409115 KRTAP6-2Q3LI66 62 aa2.79□□□□□ -1.96
PTMA-202ENST00000409115 MUC19Q7Z5P9 8384 aa2.56□□□□□ -2
PTMA-202ENST00000409115 KRTAP21-2Q3LI59 83 aa2.28□□□□□ -2.04
PTMA-202ENST00000409115 PRM1P04553 51 aa2.27□□□□□ -2.05
PTMA-202ENST00000409115 PHGR1C9JFL3 82 aa2.05□□□□□ -2.08
PTMA-202ENST00000409115 KRTAP21-1Q3LI58 79 aa1.51□□□□□ -2.17
PTMA-202ENST00000409115 MUC16Q8WXI7 14507 aa1.24□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 12.9 ms