RNA–Protein interactions for RNA: ENST00000408999.3

RGPD4-201, Transcript of RANBP2-like and GRIP domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGPD4, Length 5,464 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD4-201ENST00000408999 KRTAP19-1Q8IUB9 90 aa1.43□□□□□ -2.18
RGPD4-201ENST00000408999 MACF1Q9UPN3 7388 aaKnown RBP1.43□□□□□ -2.18
RGPD4-201ENST00000408999 KRTAP10-7P60409 375 aaPredicted RBP1.43□□□□□ -2.18
RGPD4-201ENST00000408999 LCE3CQ5T5A8 94 aa1.42□□□□□ -2.18
RGPD4-201ENST00000408999 GPR98Q8WXG9 6306 aa1.41□□□□□ -2.18
RGPD4-201ENST00000408999 MT1XP80297 61 aa1.4□□□□□ -2.18
RGPD4-201ENST00000408999 SYNE2Q8WXH0 6885 aaKnown RBP1.4□□□□□ -2.19
RGPD4-201ENST00000408999 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.4□□□□□ -2.19
RGPD4-201ENST00000408999 MT1BP07438 61 aa1.39□□□□□ -2.19
RGPD4-201ENST00000408999 KRTAP6-3Q3LI67 103 aa1.39□□□□□ -2.19
RGPD4-201ENST00000408999 KRTAP9-3Q9BYQ3 159 aa1.39□□□□□ -2.19
RGPD4-201ENST00000408999 KRTAP9-9Q9BYP9 154 aa1.38□□□□□ -2.19
RGPD4-201ENST00000408999 KRTAP9-4Q9BYQ2 154 aa1.38□□□□□ -2.19
RGPD4-201ENST00000408999 SPRR2EP22531 72 aa1.38□□□□□ -2.19
RGPD4-201ENST00000408999 SPRR2BP35325 72 aa1.38□□□□□ -2.19
RGPD4-201ENST00000408999 SPRR2AP35326 72 aa1.38□□□□□ -2.19
RGPD4-201ENST00000408999 KRTAP5-3Q6L8H2 238 aa1.36□□□□□ -2.19
RGPD4-201ENST00000408999 MUC5BQ9HC84 5762 aaPredicted RBP1.35□□□□□ -2.19
RGPD4-201ENST00000408999 LCE1EQ5T753 118 aa1.34□□□□□ -2.19
RGPD4-201ENST00000408999 SPRR2DP22532 72 aa1.34□□□□□ -2.2
RGPD4-201ENST00000408999 KRTAP5-5Q701N2 237 aaPredicted RBP1.34□□□□□ -2.2
RGPD4-201ENST00000408999 KRTAP4-8A0A0G2JLE6 195 aa1.33□□□□□ -2.2
RGPD4-201ENST00000408999 KRTAP4-8Q9BYQ9 185 aa1.33□□□□□ -2.2
RGPD4-201ENST00000408999 KRTAP2-2Q9BYT5 123 aa1.33□□□□□ -2.2
RGPD4-201ENST00000408999 MT1GP13640 62 aa1.33□□□□□ -2.2
RGPD4-201ENST00000408999 LCE1AQ5T7P2 110 aa1.31□□□□□ -2.2
RGPD4-201ENST00000408999 LCE3BQ5TA77 95 aa1.3□□□□□ -2.2
RGPD4-201ENST00000408999 KRTAP2-3P0C7H8 128 aa1.3□□□□□ -2.2
RGPD4-201ENST00000408999 KRTAP2-4Q9BYR9 128 aa1.3□□□□□ -2.2
RGPD4-201ENST00000408999 KRTAP2-1Q9BYU5 128 aa1.3□□□□□ -2.2
RGPD4-201ENST00000408999 KRTAP5-7Q6L8G8 165 aa1.28□□□□□ -2.2
RGPD4-201ENST00000408999 KRTAP4-9Q9BYQ8 210 aa1.28□□□□□ -2.2
RGPD4-201ENST00000408999 KRTAP4-3Q9BYR4 195 aa1.28□□□□□ -2.2
RGPD4-201ENST00000408999 NEBP20929 6669 aa1.27□□□□□ -2.21
RGPD4-201ENST00000408999 KRTAP19-7Q3SYF9 63 aa1.26□□□□□ -2.21
RGPD4-201ENST00000408999 KRTAP19-3Q7Z4W3 81 aa1.26□□□□□ -2.21
RGPD4-201ENST00000408999 MT1EP04732 61 aa1.26□□□□□ -2.21
RGPD4-201ENST00000408999 MT1LQ93083 61 aa1.26□□□□□ -2.21
RGPD4-201ENST00000408999 KRTAP19-6Q3LI70 58 aa1.25□□□□□ -2.21
RGPD4-201ENST00000408999 KRTAP4-12Q9BQ66 201 aa1.24□□□□□ -2.21
RGPD4-201ENST00000408999 KRTAP12-4P60329 112 aa1.24□□□□□ -2.21
RGPD4-201ENST00000408999 LCE1DQ5T752 114 aa1.24□□□□□ -2.21
RGPD4-201ENST00000408999 AHNAK2Q8IVF2 5795 aa1.22□□□□□ -2.21
RGPD4-201ENST00000408999 AHNAKQ09666 5890 aaKnown RBP1.22□□□□□ -2.21
RGPD4-201ENST00000408999 KRTAP4-2Q9BYR5 136 aa1.22□□□□□ -2.21
RGPD4-201ENST00000408999 MT1MQ8N339 61 aa1.21□□□□□ -2.22
RGPD4-201ENST00000408999 KRTAP20-1Q3LI63 56 aa1.21□□□□□ -2.22
RGPD4-201ENST00000408999 MUC5ACP98088 5654 aa1.2□□□□□ -2.22
RGPD4-201ENST00000408999 KRTAP5-10Q6L8G5 202 aa1.2□□□□□ -2.22
RGPD4-201ENST00000408999 LCE4AQ5TA78 99 aa1.19□□□□□ -2.22
RGPD4-201ENST00000408999 LCE3DQ9BYE3 92 aa1.19□□□□□ -2.22
RGPD4-201ENST00000408999 MT4P47944 62 aa1.18□□□□□ -2.22
RGPD4-201ENST00000408999 LCE3EQ5T5B0 92 aa1.16□□□□□ -2.22
RGPD4-201ENST00000408999 HMCN1Q96RW7 5635 aa1.15□□□□□ -2.23
RGPD4-201ENST00000408999 MT3P25713 68 aa1.13□□□□□ -2.23
RGPD4-201ENST00000408999 MT1AP04731 61 aa1.11□□□□□ -2.23
RGPD4-201ENST00000408999 PRM1P04553 51 aa1.09□□□□□ -2.23
RGPD4-201ENST00000408999 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.08□□□□□ -2.24
RGPD4-201ENST00000408999 LCE1BQ5T7P3 118 aa1.07□□□□□ -2.24
RGPD4-201ENST00000408999 LCE5AQ5TCM9 118 aa1.07□□□□□ -2.24
RGPD4-201ENST00000408999 KRTAP6-1Q3LI64 71 aa1.06□□□□□ -2.24
RGPD4-201ENST00000408999 KRTAP5-2Q701N4 177 aa1.05□□□□□ -2.24
RGPD4-201ENST00000408999 KRTAP6-2Q3LI66 62 aa1.04□□□□□ -2.24
RGPD4-201ENST00000408999 LCE1FQ5T754 118 aa1.04□□□□□ -2.24
RGPD4-201ENST00000408999 KRTAP4-11Q9BYQ6 195 aa1.02□□□□□ -2.25
RGPD4-201ENST00000408999 KRTAP5-9P26371 169 aa0.98□□□□□ -2.25
RGPD4-201ENST00000408999 KRTAP5-4Q6L8H1 288 aa0.9□□□□□ -2.27
RGPD4-201ENST00000408999 LCE1CQ5T751 118 aa0.9□□□□□ -2.27
RGPD4-201ENST00000408999 KRTAP20-2Q3LI61 65 aa0.89□□□□□ -2.27
RGPD4-201ENST00000408999 KRTAP5-1Q6L8H4 278 aa0.83□□□□□ -2.28
RGPD4-201ENST00000408999 KRTAP5-11Q6L8G4 156 aa0.79□□□□□ -2.28
RGPD4-201ENST00000408999 KRTAP4-4Q9BYR3 166 aa0.77□□□□□ -2.29
RGPD4-201ENST00000408999 KRTAP21-2Q3LI59 83 aa0.75□□□□□ -2.29
RGPD4-201ENST00000408999 KRTAP5-8O75690 187 aa0.74□□□□□ -2.29
RGPD4-201ENST00000408999 KRTAP21-1Q3LI58 79 aa0.73□□□□□ -2.29
RGPD4-201ENST00000408999 PHGR1C9JFL3 82 aa0.57□□□□□ -2.32
RGPD4-201ENST00000408999 MUC16Q8WXI7 14507 aa0.45□□□□□ -2.34
Retrieved 77 of 20,778 RNA–protein pairs in 94.6 ms