RNA–Protein interactions for RNA: ENST00000406638.6

LSP1-204, Transcript of lymphocyte specific protein 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LSP1, Length 2,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1-204ENST00000406638 KRTAP4-7Q9BYR0 210 aa5.67□□□□□ -1.5
LSP1-204ENST00000406638 MUC12Q9UKN1 5478 aa5.64□□□□□ -1.51
LSP1-204ENST00000406638 CRCT1Q9UGL9 99 aa5.59□□□□□ -1.51
LSP1-204ENST00000406638 SYNE2Q8WXH0 6885 aaKnown RBP5.59□□□□□ -1.51
LSP1-204ENST00000406638 MT1EP04732 61 aa5.56□□□□□ -1.52
LSP1-204ENST00000406638 MT1LQ93083 61 aa5.47□□□□□ -1.53
LSP1-204ENST00000406638 SPRR2FQ96RM1 72 aa5.41□□□□□ -1.54
LSP1-204ENST00000406638 KRTAP4-3Q9BYR4 195 aa5.36□□□□□ -1.55
LSP1-204ENST00000406638 MDN1Q9NU22 5596 aa5.35□□□□□ -1.55
LSP1-204ENST00000406638 DSTQ03001 7570 aaKnown RBP5.31□□□□□ -1.56
LSP1-204ENST00000406638 KRTAP19-3Q7Z4W3 81 aa5.27□□□□□ -1.57
LSP1-204ENST00000406638 LOC100996750A0A140TA64 210 aa5.26□□□□□ -1.57
LSP1-204ENST00000406638 KRTAP12-4P60329 112 aa5.26□□□□□ -1.57
LSP1-204ENST00000406638 KRTAP9-6A0A140TA67 174 aa5.24□□□□□ -1.57
LSP1-204ENST00000406638 MT1MQ8N339 61 aa5.23□□□□□ -1.57
LSP1-204ENST00000406638 KRTAP19-4Q3LI73 84 aa5.19□□□□□ -1.58
LSP1-204ENST00000406638 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.19□□□□□ -1.58
LSP1-204ENST00000406638 MT1GP13640 62 aa5.18□□□□□ -1.58
LSP1-204ENST00000406638 LCE5AQ5TCM9 118 aa5.18□□□□□ -1.58
LSP1-204ENST00000406638 KRTAP5-9P26371 169 aa5.16□□□□□ -1.58
LSP1-204ENST00000406638 LCE1AQ5T7P2 110 aa5.12□□□□□ -1.59
LSP1-204ENST00000406638 SPRR2EP22531 72 aa5.06□□□□□ -1.6
LSP1-204ENST00000406638 SPRR2BP35325 72 aa5.06□□□□□ -1.6
LSP1-204ENST00000406638 SPRR2AP35326 72 aa5.06□□□□□ -1.6
LSP1-204ENST00000406638 KRTAP6-3Q3LI67 103 aa4.98□□□□□ -1.61
LSP1-204ENST00000406638 KRTAP4-9Q9BYQ8 210 aa4.93□□□□□ -1.62
LSP1-204ENST00000406638 LCE3BQ5TA77 95 aa4.89□□□□□ -1.63
LSP1-204ENST00000406638 SPRR2DP22532 72 aa4.85□□□□□ -1.63
LSP1-204ENST00000406638 KRTAP9-7A8MTY7 169 aa4.84□□□□□ -1.63
LSP1-204ENST00000406638 SYNE1Q8NF91 8797 aaKnown RBP4.82□□□□□ -1.64
LSP1-204ENST00000406638 NEBP20929 6669 aa4.8□□□□□ -1.64
LSP1-204ENST00000406638 PRM1P04553 51 aa4.71□□□□□ -1.66
LSP1-204ENST00000406638 KRTAP6-1Q3LI64 71 aa4.68□□□□□ -1.66
LSP1-204ENST00000406638 LCE3DQ9BYE3 92 aa4.67□□□□□ -1.66
LSP1-204ENST00000406638 KRTAP5-5Q701N2 237 aaPredicted RBP4.66□□□□□ -1.66
LSP1-204ENST00000406638 MT1AP04731 61 aa4.65□□□□□ -1.66
LSP1-204ENST00000406638 LCE3EQ5T5B0 92 aa4.63□□□□□ -1.67
LSP1-204ENST00000406638 KRTAP2-2Q9BYT5 123 aa4.51□□□□□ -1.69
LSP1-204ENST00000406638 OBSCNQ5VST9 7968 aa4.47□□□□□ -1.69
LSP1-204ENST00000406638 KRTAP6-2Q3LI66 62 aa4.41□□□□□ -1.7
LSP1-204ENST00000406638 KRTAP9-4Q9BYQ2 154 aa4.35□□□□□ -1.71
LSP1-204ENST00000406638 MT4P47944 62 aa4.34□□□□□ -1.72
LSP1-204ENST00000406638 KRTAP5-4Q6L8H1 288 aa4.34□□□□□ -1.72
LSP1-204ENST00000406638 KRTAP4-6Q9BYQ5 205 aa4.33□□□□□ -1.72
LSP1-204ENST00000406638 LCE1EQ5T753 118 aa4.32□□□□□ -1.72
LSP1-204ENST00000406638 KRTAP20-1Q3LI63 56 aa4.25□□□□□ -1.73
LSP1-204ENST00000406638 HMCN1Q96RW7 5635 aa4.21□□□□□ -1.74
LSP1-204ENST00000406638 LCE1DQ5T752 114 aa4.17□□□□□ -1.74
LSP1-204ENST00000406638 LCE4AQ5TA78 99 aa4.14□□□□□ -1.75
LSP1-204ENST00000406638 KRTAP20-2Q3LI61 65 aa4.12□□□□□ -1.75
LSP1-204ENST00000406638 MT3P25713 68 aa4.11□□□□□ -1.75
LSP1-204ENST00000406638 KRTAP5-2Q701N4 177 aa3.96□□□□□ -1.78
LSP1-204ENST00000406638 KRTAP5-3Q6L8H2 238 aa3.95□□□□□ -1.78
LSP1-204ENST00000406638 LCE1FQ5T754 118 aa3.83□□□□□ -1.8
LSP1-204ENST00000406638 AHNAK2Q8IVF2 5795 aa3.59□□□□□ -1.83
LSP1-204ENST00000406638 KRTAP4-11Q9BYQ6 195 aa3.56□□□□□ -1.84
LSP1-204ENST00000406638 MUC5ACP98088 5654 aa3.5□□□□□ -1.85
LSP1-204ENST00000406638 LCE1BQ5T7P3 118 aa3.5□□□□□ -1.85
LSP1-204ENST00000406638 KRTAP5-1Q6L8H4 278 aa3.47□□□□□ -1.85
LSP1-204ENST00000406638 KRTAP5-8O75690 187 aa3.41□□□□□ -1.86
LSP1-204ENST00000406638 KRTAP4-2Q9BYR5 136 aa3.38□□□□□ -1.87
LSP1-204ENST00000406638 KRTAP5-10Q6L8G5 202 aa3.34□□□□□ -1.88
LSP1-204ENST00000406638 MUC19Q7Z5P9 8384 aa3.29□□□□□ -1.88
LSP1-204ENST00000406638 LCE1CQ5T751 118 aa3.27□□□□□ -1.89
LSP1-204ENST00000406638 KRTAP9-9Q9BYP9 154 aa3.22□□□□□ -1.89
LSP1-204ENST00000406638 GPR98Q8WXG9 6306 aa3.22□□□□□ -1.89
LSP1-204ENST00000406638 KRTAP5-7Q6L8G8 165 aa3.19□□□□□ -1.9
LSP1-204ENST00000406638 MUC5BQ9HC84 5762 aaPredicted RBP3.14□□□□□ -1.91
LSP1-204ENST00000406638 KRTAP21-2Q3LI59 83 aa3.03□□□□□ -1.93
LSP1-204ENST00000406638 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.03□□□□□ -1.93
LSP1-204ENST00000406638 KRTAP4-12Q9BQ66 201 aa2.95□□□□□ -1.94
LSP1-204ENST00000406638 KRTAP21-1Q3LI58 79 aa2.94□□□□□ -1.94
LSP1-204ENST00000406638 KRTAP4-4Q9BYR3 166 aa2.88□□□□□ -1.95
LSP1-204ENST00000406638 KRTAP5-11Q6L8G4 156 aa2.87□□□□□ -1.95
LSP1-204ENST00000406638 AHNAKQ09666 5890 aaKnown RBP2.6□□□□□ -1.99
LSP1-204ENST00000406638 PHGR1C9JFL3 82 aa2.5□□□□□ -2.01
LSP1-204ENST00000406638 MUC16Q8WXI7 14507 aa1.61□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 95.4 ms